Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is cysU [C]

Identifier: 91790191

GI number: 91790191

Start: 4594774

End: 4595538

Strand: Reverse

Name: cysU [C]

Synonym: Bpro_4356

Alternate gene names: 91790191

Gene position: 4595538-4594774 (Counterclockwise)

Preceding gene: 91790193

Following gene: 91790190

Centisome position: 88.37

GC content: 52.81

Gene sequence:

>765_bases
ATGATTCGATCGATTTCCGTGGTGTACGGAATCTATTTGCTGCTACCCATCGCCCTCCTGATGGTGGGCAGCGTCGGTGG
TTCCTGGACCAACTCACTTCTGCCAACCGGAATAACGTCGCAGTGGTATCTTGATCTGTGGAGTGATACCTCCTTTCGCA
AGGCGTTCACCACGAGTCTTGTGGTTGCAGGCAGTGCCTGCGTAGTTAACGCATTGATCGCCGTCCCGCTGTCTTATTCC
CTCTATCACGGTGCCAAGAACCGAGGTAGCTTCGCTGCAAAGATTGTCAGCGCCATGCCGGTGGCGGTGCCAACCATCAC
TCTTGGCTTCGGATACATCATTGTCTTCAACAGTGATCTCGCGCCATGGCTGGGCTCGATGCCACTGCTGATTGCCGCGC
ATGCAGTGCACACATTGCCGTATTTAACAAATACGTTGCTCTCGGATTTGCGTCATCTTGGACTCGAGCGCTTGGAGAAC
GCCGCGGCAACGCTGGGTGCTTCTGCTTGGCAGCAGTTCACGGGAATCGTCGTACCGAACTTGCGCCAGAGCCTTCTAAG
TGGTCTTGTGATGGTTGCTGCCATTTCCATCGGTGAGTTTGGGCTATCGAATTTACTGACGAGTTTTCAGAATCGAACCT
ACCCAGTCGTGCTACTGCAGGCCTTCTATGGCGCAACGGGTTTTGCTTGTGCAGCTACCGTAATTTTGTTGGTGCTGGCC
AGCTTCTCCGCATTCATTTCTTCAACAGTTGTCAAAAAATCATGA

Upstream 100 bases:

>100_bases
TTCACTTGTCGCCTGCGAGGTGAAGCCTAGAATTCGAGCATTGCTGGAAGACTTCAGCGTAAAACAGTTCAGGTTTGAAA
CCTGACAGGCGGAGACAAAA

Downstream 100 bases:

>100_bases
GTCTAGTCTTAGAGCAAGTTGGCTTTTCCTATCCGGGCACCAGCCATGGCGTCGAAAACATCTCAATCAATGTAGCGTCT
GGGGAACTGGTGGCGGTTAT

Product: binding-protein-dependent transport systems inner membrane component

Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: ABC Transporter Permease; Spermidine/Putrescine ABC Transporter Permease; ABC-Type Transporter Permease Component; Permease Of ABC Transporter; Polyamine ABC Transporter Permease Protein; Spermidine/Putrescine ABC Transporter Permease Protein; Spermidine/Putrescine ABC Transporter; Transmembrane Component Of ABC Transporter; ABC Transporter Membrane Protein; Ornithine Carbamoyltransferase; Spermidine/Putrescine Transport System Permease Protein; ABC Transporter Membrane Component; Sulfate ABC Transporter Permease Protein CysW; ABC Transporter; Sulfate ABC Transporter Inner Membrane Subunit CysW; ABC-Type Iron(III) Transport System Permease Component; ABC Polyamine Transporter Inner Membrane Subunit; ABC Transport System Permease Protein; ABC Transporter Integral Membrane Protein; ABC-Type Transport System Permease Protein; ABC TRANSPORTER Membrane Component; ABC Transporter Inner Membrane Protein; ABC Transport System Permease Component; Molybdenum ABC Transporter Permease; Spermidine/Putrescine Abc Transporter Permease Protein; Permease Protein; ABC Transporter Membrane Spanning Protein; ABC Transporter, Permease Component Fragment; ABC Transporter Permease Component; Iron ABC Transporter Permease

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MIRSISVVYGIYLLLPIALLMVGSVGGSWTNSLLPTGITSQWYLDLWSDTSFRKAFTTSLVVAGSACVVNALIAVPLSYS
LYHGAKNRGSFAAKIVSAMPVAVPTITLGFGYIIVFNSDLAPWLGSMPLLIAAHAVHTLPYLTNTLLSDLRHLGLERLEN
AAATLGASAWQQFTGIVVPNLRQSLLSGLVMVAAISIGEFGLSNLLTSFQNRTYPVVLLQAFYGATGFACAATVILLVLA
SFSAFISSTVVKKS

Sequences:

>Translated_254_residues
MIRSISVVYGIYLLLPIALLMVGSVGGSWTNSLLPTGITSQWYLDLWSDTSFRKAFTTSLVVAGSACVVNALIAVPLSYS
LYHGAKNRGSFAAKIVSAMPVAVPTITLGFGYIIVFNSDLAPWLGSMPLLIAAHAVHTLPYLTNTLLSDLRHLGLERLEN
AAATLGASAWQQFTGIVVPNLRQSLLSGLVMVAAISIGEFGLSNLLTSFQNRTYPVVLLQAFYGATGFACAATVILLVLA
SFSAFISSTVVKKS
>Mature_254_residues
MIRSISVVYGIYLLLPIALLMVGSVGGSWTNSLLPTGITSQWYLDLWSDTSFRKAFTTSLVVAGSACVVNALIAVPLSYS
LYHGAKNRGSFAAKIVSAMPVAVPTITLGFGYIIVFNSDLAPWLGSMPLLIAAHAVHTLPYLTNTLLSDLRHLGLERLEN
AAATLGASAWQQFTGIVVPNLRQSLLSGLVMVAAISIGEFGLSNLLTSFQNRTYPVVLLQAFYGATGFACAATVILLVLA
SFSAFISSTVVKKS

Specific function: Part Of The Abc Transporter Complex Cysawtp (Tc 3.A.1.6.1) Involved In Sulfate/Thiosulfate Import. Probably Responsible For The Translocation Of The Substrate Across The Membrane. [C]

COG id: COG1177

COG function: function code E; ABC-type spermidine/putrescine transport system, permease component II

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26950; Mature: 26950

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRSISVVYGIYLLLPIALLMVGSVGGSWTNSLLPTGITSQWYLDLWSDTSFRKAFTTSL
CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCHHHHEECCCCHHHHHHHHHH
VVAGSACVVNALIAVPLSYSLYHGAKNRGSFAAKIVSAMPVAVPTITLGFGYIIVFNSDL
HHHCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHCCCEEEEEECCCC
APWLGSMPLLIAAHAVHTLPYLTNTLLSDLRHLGLERLENAAATLGASAWQQFTGIVVPN
CHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
LRQSLLSGLVMVAAISIGEFGLSNLLTSFQNRTYPVVLLQAFYGATGFACAATVILLVLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHH
SFSAFISSTVVKKS
HHHHHHHHHHHCCC
>Mature Secondary Structure
MIRSISVVYGIYLLLPIALLMVGSVGGSWTNSLLPTGITSQWYLDLWSDTSFRKAFTTSL
CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCHHHHEECCCCHHHHHHHHHH
VVAGSACVVNALIAVPLSYSLYHGAKNRGSFAAKIVSAMPVAVPTITLGFGYIIVFNSDL
HHHCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHCCCEEEEEECCCC
APWLGSMPLLIAAHAVHTLPYLTNTLLSDLRHLGLERLENAAATLGASAWQQFTGIVVPN
CHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
LRQSLLSGLVMVAAISIGEFGLSNLLTSFQNRTYPVVLLQAFYGATGFACAATVILLVLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHH
SFSAFISSTVVKKS
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]

Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA