| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is gltI [H]
Identifier: 91790186
GI number: 91790186
Start: 4590395
End: 4591306
Strand: Reverse
Name: gltI [H]
Synonym: Bpro_4351
Alternate gene names: 91790186
Gene position: 4591306-4590395 (Counterclockwise)
Preceding gene: 91790187
Following gene: 91790185
Centisome position: 88.29
GC content: 52.63
Gene sequence:
>912_bases ATGTCGAGACGCATAGTTTCGCTCGCCGTGGCACTGTTTTTATGCGCCGGCAGCTGGACAGTTGAAGCCGATACGCTTGA CAAAGTCAGAGTGAGTAAAGCTCTGCATCTTGGACATCGCAGTGGAAGCATTCCCTTTTCGTATCTGGGAAACACCGGAC AACCGATTGGCTACGCGATAGACCTATGCAAGCATCTTGCGGCGGCCATAGCCAAAGAGATTAGGCAACCAGAAATGCAA ATCGTCTGGATTCCGATAGGACCCAACGAGCGAAATTCGGCTTTGATGGACGGGTTGATCGACTTGGATTGTGGTGACTC AACCGTTACTGCTCAATCCCAGAAGGTAATTGCCTTTTCCATTCCCATATACCTTGCAGGAACGCGGCTCCTGGTTCCAA AGGCCGCTTCCATTGCCGAAATTGGCACGCTTTCTGGAATGAAGGTGGTGACCACTACCCAATCGGGTAATGAAGCCATG CTCCGTCATGTGCTCGGGCAAACGGGTGTTACCGCCGACGTCGTGGTTGCACGGACTGCCAAGGCGGCGACAGAAGTCTT GACAACTGGGCAAGCCCAGGCTCTCTTCGCCGATGACGCTACCCTCTTTGGCATTCGAAATCTGACCAAAGACCAAGCGC AGTTCACCACGCTTCCAAAAACCTACTCGCTTCGTCCGAAGGCACTTGCTTATCGCAAAGATGATGAAAGGCTTCGGACT CTTGTCACGCGTGAAATCAAAACATTGATCGCATCAGGCCTTATTCAGAGGGCGCATGAGCAGTGGTTTAACTCCCCACT TCCTGACAGCGTGGTTGATCTCAAAACTCCGATCTCCTACCTTCTGCGAGATACATGGAAGACCCCAACCGACGTGTACA CCGACTACGCGTACGGCCACCTTCCGGACTAG
Upstream 100 bases:
>100_bases AGAAGACGGTGTTCTCGTTGTACGAAGATATCCAGCTGCCAGGCGTACAGACCGCGCGAGATATTGATCAACTCCTCGAA TGGGTCGCAGCATGGCTTGT
Downstream 100 bases:
>100_bases CATTTCTTTCAACTCCCAGGTCATTGGCTGAGGATATGCGTCGTCAGTTGCGGGGCTGCGCTATTTCCCGGACCTATATC TTCAAAGTGTCACCATGAAT
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MSRRIVSLAVALFLCAGSWTVEADTLDKVRVSKALHLGHRSGSIPFSYLGNTGQPIGYAIDLCKHLAAAIAKEIRQPEMQ IVWIPIGPNERNSALMDGLIDLDCGDSTVTAQSQKVIAFSIPIYLAGTRLLVPKAASIAEIGTLSGMKVVTTTQSGNEAM LRHVLGQTGVTADVVVARTAKAATEVLTTGQAQALFADDATLFGIRNLTKDQAQFTTLPKTYSLRPKALAYRKDDERLRT LVTREIKTLIASGLIQRAHEQWFNSPLPDSVVDLKTPISYLLRDTWKTPTDVYTDYAYGHLPD
Sequences:
>Translated_303_residues MSRRIVSLAVALFLCAGSWTVEADTLDKVRVSKALHLGHRSGSIPFSYLGNTGQPIGYAIDLCKHLAAAIAKEIRQPEMQ IVWIPIGPNERNSALMDGLIDLDCGDSTVTAQSQKVIAFSIPIYLAGTRLLVPKAASIAEIGTLSGMKVVTTTQSGNEAM LRHVLGQTGVTADVVVARTAKAATEVLTTGQAQALFADDATLFGIRNLTKDQAQFTTLPKTYSLRPKALAYRKDDERLRT LVTREIKTLIASGLIQRAHEQWFNSPLPDSVVDLKTPISYLLRDTWKTPTDVYTDYAYGHLPD >Mature_302_residues SRRIVSLAVALFLCAGSWTVEADTLDKVRVSKALHLGHRSGSIPFSYLGNTGQPIGYAIDLCKHLAAAIAKEIRQPEMQI VWIPIGPNERNSALMDGLIDLDCGDSTVTAQSQKVIAFSIPIYLAGTRLLVPKAASIAEIGTLSGMKVVTTTQSGNEAML RHVLGQTGVTADVVVARTAKAATEVLTTGQAQALFADDATLFGIRNLTKDQAQFTTLPKTYSLRPKALAYRKDDERLRTL VTREIKTLIASGLIQRAHEQWFNSPLPDSVVDLKTPISYLLRDTWKTPTDVYTDYAYGHLPD
Specific function: Part of the binding-protein-dependent transport system for glutamate and aspartate. Binds to both aspartate and glutamate [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1786876, Length=267, Percent_Identity=29.5880149812734, Blast_Score=149, Evalue=3e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 33024; Mature: 32893
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRIVSLAVALFLCAGSWTVEADTLDKVRVSKALHLGHRSGSIPFSYLGNTGQPIGYAI CCCHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCHHHHH DLCKHLAAAIAKEIRQPEMQIVWIPIGPNERNSALMDGLIDLDCGDSTVTAQSQKVIAFS HHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHCCCEEECCCCCEEECCCCEEEEEE IPIYLAGTRLLVPKAASIAEIGTLSGMKVVTTTQSGNEAMLRHVLGQTGVTADVVVARTA CCEEECCCEEECCCCCCHHHHHCCCCCEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHH KAATEVLTTGQAQALFADDATLFGIRNLTKDQAQFTTLPKTYSLRPKALAYRKDDERLRT HHHHHHHHCCCCEEEEECCCCEEHHHHCCHHHHHHHCCCCCCCCCCHHHEECCCHHHHHH LVTREIKTLIASGLIQRAHEQWFNSPLPDSVVDLKTPISYLLRDTWKTPTDVYTDYAYGH HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCC LPD CCC >Mature Secondary Structure SRRIVSLAVALFLCAGSWTVEADTLDKVRVSKALHLGHRSGSIPFSYLGNTGQPIGYAI CCHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCHHHHH DLCKHLAAAIAKEIRQPEMQIVWIPIGPNERNSALMDGLIDLDCGDSTVTAQSQKVIAFS HHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHCCCEEECCCCCEEECCCCEEEEEE IPIYLAGTRLLVPKAASIAEIGTLSGMKVVTTTQSGNEAMLRHVLGQTGVTADVVVARTA CCEEECCCEEECCCCCCHHHHHCCCCCEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHH KAATEVLTTGQAQALFADDATLFGIRNLTKDQAQFTTLPKTYSLRPKALAYRKDDERLRT HHHHHHHHCCCCEEEEECCCCEEHHHHCCHHHHHHHCCCCCCCCCCHHHEECCCHHHHHH LVTREIKTLIASGLIQRAHEQWFNSPLPDSVVDLKTPISYLLRDTWKTPTDVYTDYAYGH HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCC LPD CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 10493123; 1091635; 1091636 [H]