Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is tal [H]

Identifier: 91790185

GI number: 91790185

Start: 4589338

End: 4590300

Strand: Reverse

Name: tal [H]

Synonym: Bpro_4350

Alternate gene names: 91790185

Gene position: 4590300-4589338 (Counterclockwise)

Preceding gene: 91790186

Following gene: 91790184

Centisome position: 88.27

GC content: 53.37

Gene sequence:

>963_bases
ATGAATCAGCTCGAATCACTCAGGCAATTTACTACTGTCGTTGTCGATACCGGAGATTTCAATGAGATATCACGCTTTCG
ACCAACAGATGCGACAACCAACCCATCGTTAATTCTGAAGGCAGTCCAGCAGCAAGAATATCGAAGCTTGTTGGATTCAA
CAGTCAGTGCTGAAAAAAAACAACCGCTCGACCTCGTCATGGATCAGCTACTGGTTCGATTCGGTTGCGAAATCCTCAAG
TTGGTCCCGGGACGGGTATCAACCGAGATCGATCCACGCTTAAGCTTTGATGCCAACGCCACCGTGGCTCGCGCAGAGAG
AATCATCGCCTTGTACGAGGCTAACGGCATCGCGCCAGAGCGAGTGCTGATCAAAATTGCCTCGACGTGGGAAGGCATCC
AGGCCGCGGCCCAGCTTGAGAGCCGAGGTATTCATACGAATCTGACGCTTCTGTTCTCGCTAACCCAGGCGGTCGCTTGC
AGCCAGGCAAAGGTAAAACTCATCTCCCCATTTGTCGGTCGAATATACGACTGGCACCGCAAGCAAGCGGGGGCAGCTTG
GAACGAAGGCGAGGGCTTGGGGGTGACCGATCCAGGCGTGCAGGTTGTCCGTCAGATATTCCATTACTACAAAAAGTTTG
CAATCCCGACGGAAGTAATGGGCGCTAGCTTCAGAAACCTCCACCAAATCCGTAGTTTGGCTGGTTGCGATCTGCTAACG
ATCAGCCCGCAGCTTCTGGCGCAACTTGAGTCCCATGATGAGCCTTGCAGTATTCATCTCGCCGCGAGTGATGCGGACGA
CGTAGCGCTAGCGCCGCTGGCTTGCGACGAAGCAAGCTTCCGCTTTGCAATGAATGAAGATGCCATGGTGACCGAGAAGC
TGGCGGAGGGAATCCGCCTGTTTTGTAGAGATCTTCAGGCACTTGAACAGATTATTGCCGGCACTACTTCCGTCCCCGCA
TGA

Upstream 100 bases:

>100_bases
GACTAGCATTTCTTTCAACTCCCAGGTCATTGGCTGAGGATATGCGTCGTCAGTTGCGGGGCTGCGCTATTTCCCGGACC
TATATCTTCAAAGTGTCACC

Downstream 100 bases:

>100_bases
GCAGGCGGATTGCCAAGGATCTGCAATAGCACTGCAGCTGCCCAATAAAAATCTTACTGAACCTCAGGCAACCGACAATG
ACTGCTTCATCCCTCTCTCT

Product: transaldolase B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MNQLESLRQFTTVVVDTGDFNEISRFRPTDATTNPSLILKAVQQQEYRSLLDSTVSAEKKQPLDLVMDQLLVRFGCEILK
LVPGRVSTEIDPRLSFDANATVARAERIIALYEANGIAPERVLIKIASTWEGIQAAAQLESRGIHTNLTLLFSLTQAVAC
SQAKVKLISPFVGRIYDWHRKQAGAAWNEGEGLGVTDPGVQVVRQIFHYYKKFAIPTEVMGASFRNLHQIRSLAGCDLLT
ISPQLLAQLESHDEPCSIHLAASDADDVALAPLACDEASFRFAMNEDAMVTEKLAEGIRLFCRDLQALEQIIAGTTSVPA

Sequences:

>Translated_320_residues
MNQLESLRQFTTVVVDTGDFNEISRFRPTDATTNPSLILKAVQQQEYRSLLDSTVSAEKKQPLDLVMDQLLVRFGCEILK
LVPGRVSTEIDPRLSFDANATVARAERIIALYEANGIAPERVLIKIASTWEGIQAAAQLESRGIHTNLTLLFSLTQAVAC
SQAKVKLISPFVGRIYDWHRKQAGAAWNEGEGLGVTDPGVQVVRQIFHYYKKFAIPTEVMGASFRNLHQIRSLAGCDLLT
ISPQLLAQLESHDEPCSIHLAASDADDVALAPLACDEASFRFAMNEDAMVTEKLAEGIRLFCRDLQALEQIIAGTTSVPA
>Mature_320_residues
MNQLESLRQFTTVVVDTGDFNEISRFRPTDATTNPSLILKAVQQQEYRSLLDSTVSAEKKQPLDLVMDQLLVRFGCEILK
LVPGRVSTEIDPRLSFDANATVARAERIIALYEANGIAPERVLIKIASTWEGIQAAAQLESRGIHTNLTLLFSLTQAVAC
SQAKVKLISPFVGRIYDWHRKQAGAAWNEGEGLGVTDPGVQVVRQIFHYYKKFAIPTEVMGASFRNLHQIRSLAGCDLLT
ISPQLLAQLESHDEPCSIHLAASDADDVALAPLACDEASFRFAMNEDAMVTEKLAEGIRLFCRDLQALEQIIAGTTSVPA

Specific function: Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway [H]

COG id: COG0176

COG function: function code G; Transaldolase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transaldolase family. Type 1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI5803187, Length=316, Percent_Identity=51.5822784810127, Blast_Score=315, Evalue=2e-86,
Organism=Escherichia coli, GI1786189, Length=318, Percent_Identity=50.314465408805, Blast_Score=300, Evalue=1e-82,
Organism=Escherichia coli, GI1788807, Length=322, Percent_Identity=49.3788819875776, Blast_Score=297, Evalue=7e-82,
Organism=Caenorhabditis elegans, GI25153750, Length=320, Percent_Identity=53.4375, Blast_Score=329, Evalue=1e-90,
Organism=Caenorhabditis elegans, GI25153752, Length=166, Percent_Identity=51.8072289156626, Blast_Score=169, Evalue=2e-42,
Organism=Caenorhabditis elegans, GI17570473, Length=93, Percent_Identity=52.6881720430108, Blast_Score=100, Evalue=1e-21,
Organism=Saccharomyces cerevisiae, GI6321480, Length=321, Percent_Identity=48.9096573208723, Blast_Score=304, Evalue=1e-83,
Organism=Saccharomyces cerevisiae, GI6323386, Length=321, Percent_Identity=53.5825545171339, Blast_Score=301, Evalue=1e-82,
Organism=Drosophila melanogaster, GI45549185, Length=319, Percent_Identity=52.0376175548589, Blast_Score=322, Evalue=2e-88,

Paralogues:

None

Copy number: 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 900 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 60 Molecules/Cell In: Stationary Phase,

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR001585
- InterPro:   IPR004730
- InterPro:   IPR018225 [H]

Pfam domain/function: PF00923 Transaldolase [H]

EC number: =2.2.1.2 [H]

Molecular weight: Translated: 35212; Mature: 35212

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: PS01054 TRANSALDOLASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQLESLRQFTTVVVDTGDFNEISRFRPTDATTNPSLILKAVQQQEYRSLLDSTVSAEKK
CCHHHHHHHHHHHEECCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
QPLDLVMDQLLVRFGCEILKLVPGRVSTEIDPRLSFDANATVARAERIIALYEANGIAPE
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHEEEEEECCCCCHH
RVLIKIASTWEGIQAAAQLESRGIHTNLTLLFSLTQAVACSQAKVKLISPFVGRIYDWHR
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQAGAAWNEGEGLGVTDPGVQVVRQIFHYYKKFAIPTEVMGASFRNLHQIRSLAGCDLLT
HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEE
ISPQLLAQLESHDEPCSIHLAASDADDVALAPLACDEASFRFAMNEDAMVTEKLAEGIRL
ECHHHHHHHHCCCCCEEEEEEECCCCCEEECCEECCCCCEEEECCCCHHHHHHHHHHHHH
FCRDLQALEQIIAGTTSVPA
HHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNQLESLRQFTTVVVDTGDFNEISRFRPTDATTNPSLILKAVQQQEYRSLLDSTVSAEKK
CCHHHHHHHHHHHEECCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
QPLDLVMDQLLVRFGCEILKLVPGRVSTEIDPRLSFDANATVARAERIIALYEANGIAPE
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHEEEEEECCCCCHH
RVLIKIASTWEGIQAAAQLESRGIHTNLTLLFSLTQAVACSQAKVKLISPFVGRIYDWHR
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQAGAAWNEGEGLGVTDPGVQVVRQIFHYYKKFAIPTEVMGASFRNLHQIRSLAGCDLLT
HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEE
ISPQLLAQLESHDEPCSIHLAASDADDVALAPLACDEASFRFAMNEDAMVTEKLAEGIRL
ECHHHHHHHHCCCCCEEEEEEECCCCCEEECCEECCCCCEEEECCCCHHHHHHHHHHHHH
FCRDLQALEQIIAGTTSVPA
HHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA