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The map label for this gene is yoaB [C]

Identifier: 91790171

GI number: 91790171

Start: 4573822

End: 4574193

Strand: Reverse

Name: yoaB [C]

Synonym: Bpro_4336

Alternate gene names: 91790171

Gene position: 4574193-4573822 (Counterclockwise)

Preceding gene: 91790172

Following gene: 91790170

Centisome position: 87.96

GC content: 57.26

Gene sequence:

>372_bases
ATGAACGACATCACTCGTATCGCTACCACCAAGCGCCGCAGCAGCGTCGTGGTCTACAACGGCATCGTCTTCGTAGGCGG
GCAAACCGCCGATGACCGAAGCCAGGACATCCGCGGCCAGACCCGGCAGACCCTGGAAAAGATAGACAAGTTTCTCGCCG
AGGCTGGTACCGACAAGAGCCGCTTGCTCACCACGCAGATCTGGCTCAAAGATATCAAGAATGACTTCGTGGGCATGAAT
GAGATCTGGGATGCATGGACTCCGCCTGGCGCGACGTCCACCCGTGCCACTGCCCAGTGCGAGATGGGAGCACCCGACGT
TCTTATAGAGATGATCGTCACTGCGGCCATCGCAAAAAAGGAAGTAGCATAA

Upstream 100 bases:

>100_bases
TTCGCGCGGCCACCCCAGCATAAGAGCACCTCTTCGAGGCGAGCACAGCCATGAACTGGCCATGTGCGGGAATTTCTTCA
CTCAAAAAAAGGAAAGTCAG

Downstream 100 bases:

>100_bases
ATGAAGGCGGTCGACTATGTGATCGCGTGTCGAGCGCTCCTCATCGCCGCATGTATTGGCCTTGTCGGGCCGGTATTTGC
TCAGGAGTCCATCCTCCGCA

Product: endoribonuclease L-PSP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MNDITRIATTKRRSSVVVYNGIVFVGGQTADDRSQDIRGQTRQTLEKIDKFLAEAGTDKSRLLTTQIWLKDIKNDFVGMN
EIWDAWTPPGATSTRATAQCEMGAPDVLIEMIVTAAIAKKEVA

Sequences:

>Translated_123_residues
MNDITRIATTKRRSSVVVYNGIVFVGGQTADDRSQDIRGQTRQTLEKIDKFLAEAGTDKSRLLTTQIWLKDIKNDFVGMN
EIWDAWTPPGATSTRATAQCEMGAPDVLIEMIVTAAIAKKEVA
>Mature_123_residues
MNDITRIATTKRRSSVVVYNGIVFVGGQTADDRSQDIRGQTRQTLEKIDKFLAEAGTDKSRLLTTQIWLKDIKNDFVGMN
EIWDAWTPPGATSTRATAQCEMGAPDVLIEMIVTAAIAKKEVA

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Escherichia coli, GI87081979, Length=114, Percent_Identity=36.8421052631579, Blast_Score=75, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 13574; Mature: 13574

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDITRIATTKRRSSVVVYNGIVFVGGQTADDRSQDIRGQTRQTLEKIDKFLAEAGTDKS
CCCHHHHHHHHCCCEEEEECCEEEECCCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCHH
RLLTTQIWLKDIKNDFVGMNEIWDAWTPPGATSTRATAQCEMGAPDVLIEMIVTAAIAKK
HHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHH
EVA
CCC
>Mature Secondary Structure
MNDITRIATTKRRSSVVVYNGIVFVGGQTADDRSQDIRGQTRQTLEKIDKFLAEAGTDKS
CCCHHHHHHHHCCCEEEEECCEEEECCCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCHH
RLLTTQIWLKDIKNDFVGMNEIWDAWTPPGATSTRATAQCEMGAPDVLIEMIVTAAIAKK
HHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHH
EVA
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA