| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91790158
Identifier: 91790158
GI number: 91790158
Start: 4554364
End: 4555272
Strand: Direct
Name: 91790158
Synonym: Bpro_4322
Alternate gene names: NA
Gene position: 4554364-4555272 (Clockwise)
Preceding gene: 91790157
Following gene: 91790159
Centisome position: 87.58
GC content: 63.81
Gene sequence:
>909_bases ATGAAATTTGAAAAAACACCCGGTTGGCTGGATTGGTACGCCGGCCCCAGCCAACCGCAATTCAAGCTGCCACCCGGTAG CGTCGATGCGCACTGCCACGTCTTCGGGCCGGGCGCGCAGTTCCCCTTCGCACCCGAGCGCAAGTACACGCCATGCGACG CCAGCAAACAGCAGCTGTTCGCCTTGCGGGACCACCTTGGCTTCGACAAGAACGTGATCGTGCAGGCGACGTGCCACGGC GCCGACAACAGCGCACTGCTGGACGCGCTGGCGCATTCCGCAGGCCGCGCGCGCGGCGTGGTGACGGTCAAGCGCAGTGT CACCGACGATGAGCTGCATGCGATGAACGCGGCCGGTGTGCGTGGCGTGCGCTTCAACTTCGTCAAGCGTCTGGTCGATT TCACGCCCAAGGATGAGCTGAAGGAAATTGCCGAGCAAATCGCGCCGCTGGGCTGGCATGTGGTGATTTACTTCGAAGCG GTCGATCTGCCGGAGCTGTGGGACTTCTTCACTGCGCTGCCGACGACTGTGGTCGTGGACCACATGGGCCGGCCGGATGT GAGCAAACCCATCGATGGCCCGGAGTTCGCGCTGTTCGTGAGATTCATGCGCGAGCACCCGAACGTCTGGTCGAAGGTGA GCTGCCCGGAGCGACTCAGCGTCGCCGGCCCCCCGGCACGCCATGGCGAGCGGGACGCCTATCGCGACGTCGTGCCATTC GCACGGCGCATCGTCGAGACTTTTCCCGATCGCGTCCTTTGGGGTACCGACTGGCCGCATCCCAATTTGAAGGACCACAT GCCCGACGACGGGCTGCTGGTCGACTTCATCCCGCACATCGCGACGACCGCAGAGCTGCAGCGCAAGCTGCTGGTGGACA ACCCGACGCGCCTGTACTGGGGAAATTGA
Upstream 100 bases:
>100_bases AAACGGGCCAAGCTCGCCGCAGGTGTGCTGGGCCTGGACATGTACAGGATGCGCGAGCCGCTTGAGAAGGCCGGCCTGAA GTACATCGATTGAGCCCTGC
Downstream 100 bases:
>100_bases TACGCCGTTCCTGATCTTCGCGGGCATGCATTCATATCCAGTCACTTTTTTACACAACATCTCCATGACCATCAACCCCC ATCGACGTAGCGCCGTTGCC
Product: amidohydrolase 2
Products: NA
Alternate protein names: 2-Pyrone-4 6-Dicarboxylic Acid Hydrolase; Amidohydrolase; Dicarboxylic Acid Hydrolase; Metal-Dependent Hydrolase; Amidohydrolase Family Protein; 2-Pyrone-4 6-Dicarbaxylate Hydrolase; 2-Pyrone-4 6-Dicarboxylate Hydrolase; 2-Pyrone-4 6-Dicarboxylate Lactonase; Hydrolase Amidohydrolase 2 Motif; Metal-Dependent Hydrolase Of TIM-Barrel Fold; Transcriptional Regulator GntR; Aminohydrolase; Metal-Dependent Transmembrane Hydrolase; Metal-Dependent Hydrolase Protein; Metal-Dependent Hydrolase Of TIM-Barrel Fold Family; Amidohydrolase 2 Family; Amidohydrolase Family; Exported Protein
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MKFEKTPGWLDWYAGPSQPQFKLPPGSVDAHCHVFGPGAQFPFAPERKYTPCDASKQQLFALRDHLGFDKNVIVQATCHG ADNSALLDALAHSAGRARGVVTVKRSVTDDELHAMNAAGVRGVRFNFVKRLVDFTPKDELKEIAEQIAPLGWHVVIYFEA VDLPELWDFFTALPTTVVVDHMGRPDVSKPIDGPEFALFVRFMREHPNVWSKVSCPERLSVAGPPARHGERDAYRDVVPF ARRIVETFPDRVLWGTDWPHPNLKDHMPDDGLLVDFIPHIATTAELQRKLLVDNPTRLYWGN
Sequences:
>Translated_302_residues MKFEKTPGWLDWYAGPSQPQFKLPPGSVDAHCHVFGPGAQFPFAPERKYTPCDASKQQLFALRDHLGFDKNVIVQATCHG ADNSALLDALAHSAGRARGVVTVKRSVTDDELHAMNAAGVRGVRFNFVKRLVDFTPKDELKEIAEQIAPLGWHVVIYFEA VDLPELWDFFTALPTTVVVDHMGRPDVSKPIDGPEFALFVRFMREHPNVWSKVSCPERLSVAGPPARHGERDAYRDVVPF ARRIVETFPDRVLWGTDWPHPNLKDHMPDDGLLVDFIPHIATTAELQRKLLVDNPTRLYWGN >Mature_302_residues MKFEKTPGWLDWYAGPSQPQFKLPPGSVDAHCHVFGPGAQFPFAPERKYTPCDASKQQLFALRDHLGFDKNVIVQATCHG ADNSALLDALAHSAGRARGVVTVKRSVTDDELHAMNAAGVRGVRFNFVKRLVDFTPKDELKEIAEQIAPLGWHVVIYFEA VDLPELWDFFTALPTTVVVDHMGRPDVSKPIDGPEFALFVRFMREHPNVWSKVSCPERLSVAGPPARHGERDAYRDVVPF ARRIVETFPDRVLWGTDWPHPNLKDHMPDDGLLVDFIPHIATTAELQRKLLVDNPTRLYWGN
Specific function: Unknown
COG id: COG3618
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34033; Mature: 34033
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFEKTPGWLDWYAGPSQPQFKLPPGSVDAHCHVFGPGAQFPFAPERKYTPCDASKQQLF CCCCCCCCCEEECCCCCCCCEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHH ALRDHLGFDKNVIVQATCHGADNSALLDALAHSAGRARGVVTVKRSVTDDELHAMNAAGV HHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCC RGVRFNFVKRLVDFTPKDELKEIAEQIAPLGWHVVIYFEAVDLPELWDFFTALPTTVVVD CHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHH HMGRPDVSKPIDGPEFALFVRFMREHPNVWSKVSCPERLSVAGPPARHGERDAYRDVVPF CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHH ARRIVETFPDRVLWGTDWPHPNLKDHMPDDGLLVDFIPHIATTAELQRKLLVDNPTRLYW HHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEC GN CC >Mature Secondary Structure MKFEKTPGWLDWYAGPSQPQFKLPPGSVDAHCHVFGPGAQFPFAPERKYTPCDASKQQLF CCCCCCCCCEEECCCCCCCCEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHH ALRDHLGFDKNVIVQATCHGADNSALLDALAHSAGRARGVVTVKRSVTDDELHAMNAAGV HHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCC RGVRFNFVKRLVDFTPKDELKEIAEQIAPLGWHVVIYFEAVDLPELWDFFTALPTTVVVD CHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHH HMGRPDVSKPIDGPEFALFVRFMREHPNVWSKVSCPERLSVAGPPARHGERDAYRDVVPF CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHH ARRIVETFPDRVLWGTDWPHPNLKDHMPDDGLLVDFIPHIATTAELQRKLLVDNPTRLYW HHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEC GN CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA