| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is proA [H]
Identifier: 91790157
GI number: 91790157
Start: 4553673
End: 4554356
Strand: Direct
Name: proA [H]
Synonym: Bpro_4321
Alternate gene names: 91790157
Gene position: 4553673-4554356 (Clockwise)
Preceding gene: 91790156
Following gene: 91790158
Centisome position: 87.57
GC content: 64.47
Gene sequence:
>684_bases ATGACGACACTCGGAATCGTCAAACGCAACATCGTTCGCGCAGACCGCGGCGCCATTGAAACGCTGGGCCGCGTCGGCTC GGCCACATCGCACGAAGCCATGGGCCGGGTCGGCCTGATGAAACCCTATATGCGGCCCATCTATCCCGGCGCGCAGGTCG CAGGCCCGGCTGTGACGGTACTGCTGCATCCGGGCGACAACTGGATGATGCATGTGGTTGCCGAACAGATCCAGCCCGGC GATGTCGTCGTGGCCGCCATCACGGCCGAATGCACCGACGGCTATTTCGGTGACCTGCTCGCTACCTCGTTCATGGCGCG TGGCGCAGTCGCGCTGGTCATCGACGCGGGCTGCCGCGACATCAAAACGCTGAAAGAGATGGGCTTCCCGGTCTGGAGCA AGGCGATCAGCGCCAAGGGCACCATCAAGGCCACGCTCGGCTCCGTGAACATCCCCGTCGTTTGCGCGAGCGCGCTGGTC AATCCCGGTGACGTGATCGTTGCGGATGACGACGGCGTCACCGTGGTTCCCGCGGATTGGGCCGTGAAGACCGCTGAAGC CGCCGCGACCCGCGAAGCCCTGGAAGGGGAAAAACGGGCCAAGCTCGCCGCAGGTGTGCTGGGCCTGGACATGTACAGGA TGCGCGAGCCGCTTGAGAAGGCCGGCCTGAAGTACATCGATTGA
Upstream 100 bases:
>100_bases AGATCCTGAGCGATGAAGACAGACACCAGATTTACGAAGGCAATTCGCGGCGAGTCTTCCCGCGGCTCGATGCGCTGTTG AAAGCGAAAGGACTCTGACC
Downstream 100 bases:
>100_bases GCCCTGCATGAAATTTGAAAAAACACCCGGTTGGCTGGATTGGTACGCCGGCCCCAGCCAACCGCAATTCAAGCTGCCAC CCGGTAGCGTCGATGCGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: 4-hydroxy-2-oxoglutarate aldolase [H]
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MTTLGIVKRNIVRADRGAIETLGRVGSATSHEAMGRVGLMKPYMRPIYPGAQVAGPAVTVLLHPGDNWMMHVVAEQIQPG DVVVAAITAECTDGYFGDLLATSFMARGAVALVIDAGCRDIKTLKEMGFPVWSKAISAKGTIKATLGSVNIPVVCASALV NPGDVIVADDDGVTVVPADWAVKTAEAAATREALEGEKRAKLAAGVLGLDMYRMREPLEKAGLKYID
Sequences:
>Translated_227_residues MTTLGIVKRNIVRADRGAIETLGRVGSATSHEAMGRVGLMKPYMRPIYPGAQVAGPAVTVLLHPGDNWMMHVVAEQIQPG DVVVAAITAECTDGYFGDLLATSFMARGAVALVIDAGCRDIKTLKEMGFPVWSKAISAKGTIKATLGSVNIPVVCASALV NPGDVIVADDDGVTVVPADWAVKTAEAAATREALEGEKRAKLAAGVLGLDMYRMREPLEKAGLKYID >Mature_226_residues TTLGIVKRNIVRADRGAIETLGRVGSATSHEAMGRVGLMKPYMRPIYPGAQVAGPAVTVLLHPGDNWMMHVVAEQIQPGD VVVAAITAECTDGYFGDLLATSFMARGAVALVIDAGCRDIKTLKEMGFPVWSKAISAKGTIKATLGSVNIPVVCASALVN PGDVIVADDDGVTVVPADWAVKTAEAAATREALEGEKRAKLAAGVLGLDMYRMREPLEKAGLKYID
Specific function: Plays a role in protocatechuate degradation. Has a broad substrate specificity and catalyzes the aldol cleavage of 4- hydroxy-4-methyl-2-oxoglutarate, 4-hydroxy-2-oxoglutarate and 4- carboxy-4-hydroxy-2-oxoadipate, and the decarboxylation of oxaloacetate.
COG id: COG0684
COG function: function code H; Demethylmenaquinone methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014165 - InterPro: IPR005493 [H]
Pfam domain/function: PF03737 Methyltransf_6 [H]
EC number: =4.1.1.3; =4.1.3.16; =4.1.3.17 [H]
Molecular weight: Translated: 23875; Mature: 23744
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLGIVKRNIVRADRGAIETLGRVGSATSHEAMGRVGLMKPYMRPIYPGAQVAGPAVTV CCCHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHCCHHHHHHHHHCCCCCCCCCCCEEEE LLHPGDNWMMHVVAEQIQPGDVVVAAITAECTDGYFGDLLATSFMARGAVALVIDAGCRD EEECCCCHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCHH IKTLKEMGFPVWSKAISAKGTIKATLGSVNIPVVCASALVNPGDVIVADDDGVTVVPADW HHHHHHCCCCHHHHHHCCCCEEEEEECCCCCHHHHHHHHCCCCCEEEECCCCCEEEECCC AVKTAEAAATREALEGEKRAKLAAGVLGLDMYRMREPLEKAGLKYID HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TTLGIVKRNIVRADRGAIETLGRVGSATSHEAMGRVGLMKPYMRPIYPGAQVAGPAVTV CCHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHCCHHHHHHHHHCCCCCCCCCCCEEEE LLHPGDNWMMHVVAEQIQPGDVVVAAITAECTDGYFGDLLATSFMARGAVALVIDAGCRD EEECCCCHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCHH IKTLKEMGFPVWSKAISAKGTIKATLGSVNIPVVCASALVNPGDVIVADDDGVTVVPADW HHHHHHCCCCHHHHHHCCCCEEEEEECCCCCHHHHHHHHCCCCCEEEECCCCCEEEECCC AVKTAEAAATREALEGEKRAKLAAGVLGLDMYRMREPLEKAGLKYID HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11826967 [H]