| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91790151
Identifier: 91790151
GI number: 91790151
Start: 4547009
End: 4547977
Strand: Reverse
Name: 91790151
Synonym: Bpro_4314
Alternate gene names: NA
Gene position: 4547977-4547009 (Counterclockwise)
Preceding gene: 91790152
Following gene: 91790150
Centisome position: 87.46
GC content: 67.49
Gene sequence:
>969_bases ATGTTGAATAGACGACAAGCCCTGGCGACCCTTCTTGCCGGACCCCTTGGGGTTGCTGGCGTGACGGCCCAGCCCGCGTT TCCCTCCAGGCCGCTTCGCATGATCGTTGGCTACACCGCCGGCGGCGCGGTCGACCTGATTGCACGCTCCATCGCGCAGC AGCTGCAGCCAAGCCTCGGGCAGCCGGTGATGGTGGAGAACCGCCCCGGCGCCGGCACCAATGTGGCCGTGCGTGCCCTG ATCGAGGGCCCGGCCGACGGCCACACCTTGATGCTTGCCGCCAACGCATTGGCGGCCAATGTCACGCTCTACCAACCGGC GCCCTACAACTTGTCCAGGGACGTCACGCCGATCGCCTTGGTGGGGCGTGTCCCCGTCGTTCTGGCGGTAGCAGCGACTT CCCCGGTCGGCAACCTGCAGCAGTTCATTGCGGCCGCCAAAGCCAATCCGCCGGTCAGTTACGGCTCCCCCGGCAACGGC TCGACGCCGCACCTGGCGATCGAACTGTTCGAGCGGGTCGCGGGCATCAAGTTCACGCACGTGCCCTACAAGGGCGGCTC GCAGGCGATTACTGACGTGCTGGGCGGCCATGTGCAGGCCGTCGCAGTCAACGCGCTGGAGGTGCAGCCGCATGTGCGCA GCGGCAAGCTGCGCGTGCTGGCCGTCATGACGCCGCAACGCGCTGGCATTTTCCCGGAGGTGCCGACGGTGGCGGAATCC GGCTTTCCGGGCTTCGAAGCTTCGGTCTGGTACGGCGTCATCGCACCCGCCGGCCTGCCACAGCCGATTGCCACGCGGCT GCATGCGGAAGTCCAGAAGGCGCTCGCCTCCGATGACGTCCGCCAGCGGCTCTCTTCAGCGGGCGGTGAAGTGCTGCCCG GTTCGCCGGCGCAGTTCACGAAGCTGTTGCAGGACGAAAGCGCGCGCTACGCCAGGCTGATCCGCGAAGCGCAGATCAAG CCGGACTGA
Upstream 100 bases:
>100_bases GCATTACGCACGCGTTCTAACTGTACTCCCCAGGCTCTCCAGTTTTGAAGCCTCTTGCACAAGCAACCAGGCTTCATTTT TTTCTTTAGAAGGCACTTGC
Downstream 100 bases:
>100_bases GCGATGCGGAGTTTCACCATGCCTTCTTTCTCGAAGCGCCGCGAGGATCCCTCCCGTCGGCGCCTGCTGGCAGCTGTGCT CGCCGTTGCAGTGTCCCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MLNRRQALATLLAGPLGVAGVTAQPAFPSRPLRMIVGYTAGGAVDLIARSIAQQLQPSLGQPVMVENRPGAGTNVAVRAL IEGPADGHTLMLAANALAANVTLYQPAPYNLSRDVTPIALVGRVPVVLAVAATSPVGNLQQFIAAAKANPPVSYGSPGNG STPHLAIELFERVAGIKFTHVPYKGGSQAITDVLGGHVQAVAVNALEVQPHVRSGKLRVLAVMTPQRAGIFPEVPTVAES GFPGFEASVWYGVIAPAGLPQPIATRLHAEVQKALASDDVRQRLSSAGGEVLPGSPAQFTKLLQDESARYARLIREAQIK PD
Sequences:
>Translated_322_residues MLNRRQALATLLAGPLGVAGVTAQPAFPSRPLRMIVGYTAGGAVDLIARSIAQQLQPSLGQPVMVENRPGAGTNVAVRAL IEGPADGHTLMLAANALAANVTLYQPAPYNLSRDVTPIALVGRVPVVLAVAATSPVGNLQQFIAAAKANPPVSYGSPGNG STPHLAIELFERVAGIKFTHVPYKGGSQAITDVLGGHVQAVAVNALEVQPHVRSGKLRVLAVMTPQRAGIFPEVPTVAES GFPGFEASVWYGVIAPAGLPQPIATRLHAEVQKALASDDVRQRLSSAGGEVLPGSPAQFTKLLQDESARYARLIREAQIK PD >Mature_322_residues MLNRRQALATLLAGPLGVAGVTAQPAFPSRPLRMIVGYTAGGAVDLIARSIAQQLQPSLGQPVMVENRPGAGTNVAVRAL IEGPADGHTLMLAANALAANVTLYQPAPYNLSRDVTPIALVGRVPVVLAVAATSPVGNLQQFIAAAKANPPVSYGSPGNG STPHLAIELFERVAGIKFTHVPYKGGSQAITDVLGGHVQAVAVNALEVQPHVRSGKLRVLAVMTPQRAGIFPEVPTVAES GFPGFEASVWYGVIAPAGLPQPIATRLHAEVQKALASDDVRQRLSSAGGEVLPGSPAQFTKLLQDESARYARLIREAQIK PD
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 33497; Mature: 33497
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNRRQALATLLAGPLGVAGVTAQPAFPSRPLRMIVGYTAGGAVDLIARSIAQQLQPSLG CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC QPVMVENRPGAGTNVAVRALIEGPADGHTLMLAANALAANVTLYQPAPYNLSRDVTPIAL CCEEEECCCCCCCCCEEEEEECCCCCCCEEEEEECHHEEEEEEECCCCCCCCCCCCCEEH VGRVPVVLAVAATSPVGNLQQFIAAAKANPPVSYGSPGNGSTPHLAIELFERVAGIKFTH HCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEE VPYKGGSQAITDVLGGHVQAVAVNALEVQPHVRSGKLRVLAVMTPQRAGIFPEVPTVAES CCCCCCHHHHHHHHCCCEEEEEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCHHHCC GFPGFEASVWYGVIAPAGLPQPIATRLHAEVQKALASDDVRQRLSSAGGEVLPGSPAQFT CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH KLLQDESARYARLIREAQIKPD HHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLNRRQALATLLAGPLGVAGVTAQPAFPSRPLRMIVGYTAGGAVDLIARSIAQQLQPSLG CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC QPVMVENRPGAGTNVAVRALIEGPADGHTLMLAANALAANVTLYQPAPYNLSRDVTPIAL CCEEEECCCCCCCCCEEEEEECCCCCCCEEEEEECHHEEEEEEECCCCCCCCCCCCCEEH VGRVPVVLAVAATSPVGNLQQFIAAAKANPPVSYGSPGNGSTPHLAIELFERVAGIKFTH HCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEE VPYKGGSQAITDVLGGHVQAVAVNALEVQPHVRSGKLRVLAVMTPQRAGIFPEVPTVAES CCCCCCHHHHHHHHCCCEEEEEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCHHHCC GFPGFEASVWYGVIAPAGLPQPIATRLHAEVQKALASDDVRQRLSSAGGEVLPGSPAQFT CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH KLLQDESARYARLIREAQIKPD HHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]