Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91790150

Identifier: 91790150

GI number: 91790150

Start: 4546154

End: 4546990

Strand: Reverse

Name: 91790150

Synonym: Bpro_4313

Alternate gene names: NA

Gene position: 4546990-4546154 (Counterclockwise)

Preceding gene: 91790151

Following gene: 91790149

Centisome position: 87.44

GC content: 71.21

Gene sequence:

>837_bases
ATGCCTTCTTTCTCGAAGCGCCGCGAGGATCCCTCCCGTCGGCGCCTGCTGGCAGCTGTGCTCGCCGTTGCAGTGTCCCT
CAGCGGCTGCGCAGCAGTGCCAGCGCCGACCGAGCCCACGGCGGCGGCGCGCGCAGCGCTTGCGCCCACCGGTACGCTGC
GTGTTGCGGTTTATCCGGGCAGTCCCACGTCCCTGGTCGAACAGGCGCCGCCAGCGAGCATGCGGGGTGTCAGCGTCGAT
CTCGGCCGCTCGCTGGCAGTCAGGCTCGGCGTGCCCGTGCAAATCGCCGTCTACCCGCGCCTGGCGGAGGCTTTGGCTGC
GCTGCAGCGCGGCGATGCGGATTTCACGATCACCAACGCCACGGCTGAACGTGCGCGCATGGTGGATTTCGCGCCGACAC
TCGTGGACCTCGAACTCGGCGTGCTGGTGCCGTCCACGTCGCGCGTCACGGCGGTCGAGCGGCTGGACCAGCCAGGTGTC
ACAGTCGGCGTCAGCCAGGGCAGCTCCTCCGAGCGGGTGCTCGGCGCCCGCCTGACGCAGGCCAGGCTGCGTAGCTTCCC
GACGCTGGATGCCGCGCGTGCGGCGCTTCAGGCCCAAGAGGTCGATGCGTACGCGACCAACAAGGGCATTCTGTTCGAGC
TGGCGGAGCGGGTGCCAGGTGCGCGCGTGCTGGAGGGCCGCTGGGGCACGGAGCATCTCGCGCCGGCCATCCCCAAGGGC
CGCGACGCCGGCATGCCTTACCTGCGGGCCTTTACGGAGCAAGTCCGCGGCAACGGCGAACTCGAACGCGCGGCCATGCG
CGCGGGGCAGCGCGGCACAGTGCCGCCCGCACGGTAG

Upstream 100 bases:

>100_bases
GGCGCAGTTCACGAAGCTGTTGCAGGACGAAAGCGCGCGCTACGCCAGGCTGATCCGCGAAGCGCAGATCAAGCCGGACT
GAGCGATGCGGAGTTTCACC

Downstream 100 bases:

>100_bases
CCGCGAGCTCAGGGCCGCGCCACGGCACCGCCTGCCAGATTCACCAAGGGCTCCGCGCGCTCCTCGTTGCCGTCGGAAAA
GCCGGCGCTGTGGGGTGTGA

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 278; Mature: 277

Protein sequence:

>278_residues
MPSFSKRREDPSRRRLLAAVLAVAVSLSGCAAVPAPTEPTAAARAALAPTGTLRVAVYPGSPTSLVEQAPPASMRGVSVD
LGRSLAVRLGVPVQIAVYPRLAEALAALQRGDADFTITNATAERARMVDFAPTLVDLELGVLVPSTSRVTAVERLDQPGV
TVGVSQGSSSERVLGARLTQARLRSFPTLDAARAALQAQEVDAYATNKGILFELAERVPGARVLEGRWGTEHLAPAIPKG
RDAGMPYLRAFTEQVRGNGELERAAMRAGQRGTVPPAR

Sequences:

>Translated_278_residues
MPSFSKRREDPSRRRLLAAVLAVAVSLSGCAAVPAPTEPTAAARAALAPTGTLRVAVYPGSPTSLVEQAPPASMRGVSVD
LGRSLAVRLGVPVQIAVYPRLAEALAALQRGDADFTITNATAERARMVDFAPTLVDLELGVLVPSTSRVTAVERLDQPGV
TVGVSQGSSSERVLGARLTQARLRSFPTLDAARAALQAQEVDAYATNKGILFELAERVPGARVLEGRWGTEHLAPAIPKG
RDAGMPYLRAFTEQVRGNGELERAAMRAGQRGTVPPAR
>Mature_277_residues
PSFSKRREDPSRRRLLAAVLAVAVSLSGCAAVPAPTEPTAAARAALAPTGTLRVAVYPGSPTSLVEQAPPASMRGVSVDL
GRSLAVRLGVPVQIAVYPRLAEALAALQRGDADFTITNATAERARMVDFAPTLVDLELGVLVPSTSRVTAVERLDQPGVT
VGVSQGSSSERVLGARLTQARLRSFPTLDAARAALQAQEVDAYATNKGILFELAERVPGARVLEGRWGTEHLAPAIPKGR
DAGMPYLRAFTEQVRGNGELERAAMRAGQRGTVPPAR

Specific function: Unknown

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29246; Mature: 29115

Theoretical pI: Translated: 10.93; Mature: 10.93

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSFSKRREDPSRRRLLAAVLAVAVSLSGCAAVPAPTEPTAAARAALAPTGTLRVAVYPG
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCEEEEEEECC
SPTSLVEQAPPASMRGVSVDLGRSLAVRLGVPVQIAVYPRLAEALAALQRGDADFTITNA
CCHHHHHCCCCCCCCCCEEECCCCEEEEECCCEEEEEHHHHHHHHHHHHCCCCCEEEECC
TAERARMVDFAPTLVDLELGVLVPSTSRVTAVERLDQPGVTVGVSQGSSSERVLGARLTQ
HHHHHHHHHCCCCEEEEEEEEEECCCCHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHH
ARLRSFPTLDAARAALQAQEVDAYATNKGILFELAERVPGARVLEGRWGTEHLAPAIPKG
HHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEECCCCCCHHHCCCCCCC
RDAGMPYLRAFTEQVRGNGELERAAMRAGQRGTVPPAR
CCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
PSFSKRREDPSRRRLLAAVLAVAVSLSGCAAVPAPTEPTAAARAALAPTGTLRVAVYPG
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCEEEEEEECC
SPTSLVEQAPPASMRGVSVDLGRSLAVRLGVPVQIAVYPRLAEALAALQRGDADFTITNA
CCHHHHHCCCCCCCCCCEEECCCCEEEEECCCEEEEEHHHHHHHHHHHHCCCCCEEEECC
TAERARMVDFAPTLVDLELGVLVPSTSRVTAVERLDQPGVTVGVSQGSSSERVLGARLTQ
HHHHHHHHHCCCCEEEEEEEEEECCCCHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHH
ARLRSFPTLDAARAALQAQEVDAYATNKGILFELAERVPGARVLEGRWGTEHLAPAIPKG
HHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEECCCCCCHHHCCCCCCC
RDAGMPYLRAFTEQVRGNGELERAAMRAGQRGTVPPAR
CCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA