| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91790149
Identifier: 91790149
GI number: 91790149
Start: 4543452
End: 4544996
Strand: Reverse
Name: 91790149
Synonym: Bpro_4311
Alternate gene names: NA
Gene position: 4544996-4543452 (Counterclockwise)
Preceding gene: 91790150
Following gene: 91790145
Centisome position: 87.4
GC content: 51.84
Gene sequence:
>1545_bases ATGGGAGGGTTAAGCCATTTAGGCGTTAAGAATCTGCGAAGCCTGCGCTGCGTGCCCGCAGTGCGTATTGCACCGATCAC AGTGCTGCTAGGACGGAACAGTGTTGGCAAAAGCACCTTCGCCAGAATCTTTCCATTGTTCCGCCAGAGTTCTGAGCGGA AGAAAAAGTCCCCCGTTCTATGGTTCGGCGACCTAGTGGACTTCGGGTCCTTGGAGCGCTCAGTTACCGAGGGTGAAAAA GAGATCGGGTTTACTTTTCACATTGACGTGGAGCGACCGACCAAAAAAGGCACGGTGCCTTGGCATCAACGCCGCGGAAA GACCTTGGCAGAGGTATCGATCACCCTGGTGGAGGACACCCAGCAGACCGGCCACGCGAAGAATGTGACTGTGAAGTTGC TTGGTGGTGAAATCTCGATCGATCCGAGTAAGGAAGTCTCAATGAACACGCCGTTTTTCGTGAACGGTAAGAGGTATGAC CCAATCACAAAGGATCATGGCACCGTCACTTTCCAAGGCGACATTCTTCCTCTCATTTATTTTTATTTGTACCAAAAAGA CCCAAAGGGTACAGCCTCTTGGGTACAGTCCGCAAACCATTGGGAAGACCTTCCTACCCAAGTCATCCGACGTCATGTGC ATTCGAATACGAGCGCTGTGACATGCAGAAAAATCGCTAATCGTGTGCCAGTGGGTACAGTTGAGGAAATTGAAAAGGCT TTAGTAGAAATTCCGGGGCCGCCCAGCTGGAGAGCGGTTGCACAGTCAGGCAATACAAAAAGTATTGCTGCACAGCTACA TCACGCGTTGTTGGTATCTCACACAGATGAAATATTCCGGCAAGTAGACGCCGCGCTGCGATCTTATTTTCAAGGAGTTC GGTACCTAAAGCCATTGCGGGCGACAGCCGAGCGCTACTACCGCAAGCTGGACCTTTCCGTCTCGGAGATCGAAGCGGAC GGCAGCAATCTTCCCATGTTCCTCGACAGTCTTAGCGAAGCGGACTTGAAGAACTTTCGGAGCTGGGTGAGAATTTTTCT CGACGTTGATGCCTTCCCTAAGCGTCAAGGTGATCAAGTTATGGTGATGGCCCAAGGGAAAAATGATCCCAAGCCATTCA ATATTGCGGACATGGGTTTCGGTATTTCTCAGGTACTGCCCATAGCCGCTCAGCTTTGGGCTACAACCCGGCCTGGGAGC TGGACTCAGTTGACCTCGATGGTTGTTCTTGAGCAGCCTGAACTGCACCTACACCCTGATTCGCAGGCCAGACTGGCCGA CGTATTTGCGGGCACTATCGGCGCAACCAACCCACGATCACCAAGAACCCCATCGATCCTGGTTGAAACGCACAGTCAAC ACTTGGTCAACAGGCTTGGTCAACTTGTGGAGAGTGGGCGGCTAGCTGCAGAGGATGTTTCAATCATTCTTTTCGAGTCC AGCGGCGGACCTTCACCGTCAACCAAAGTCAGAATCTCAAGTTTTTCAGCTGAGGGGGTGCTACAAAACTGGCCCTACGG TTTTTTTGAACCGGAGATCGAGTGA
Upstream 100 bases:
>100_bases CCCCGCCAGTGGCGCCCTTGAATTTGGCACCAACCTAGTGGATCCACGCATCAATATTTCCCGGTGACATCCTGTAACAT GGCGAAAAAAGGGGAATCGT
Downstream 100 bases:
>100_bases TGTGGATTGAACTTTCTGACTCGTTACCAGAGGCATTTCCTCAGCCTGATTTGCTTACATGCTCTGTGTTGCAGGCGGTT GCCGATGCGTCGTTTCACGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 514; Mature: 513
Protein sequence:
>514_residues MGGLSHLGVKNLRSLRCVPAVRIAPITVLLGRNSVGKSTFARIFPLFRQSSERKKKSPVLWFGDLVDFGSLERSVTEGEK EIGFTFHIDVERPTKKGTVPWHQRRGKTLAEVSITLVEDTQQTGHAKNVTVKLLGGEISIDPSKEVSMNTPFFVNGKRYD PITKDHGTVTFQGDILPLIYFYLYQKDPKGTASWVQSANHWEDLPTQVIRRHVHSNTSAVTCRKIANRVPVGTVEEIEKA LVEIPGPPSWRAVAQSGNTKSIAAQLHHALLVSHTDEIFRQVDAALRSYFQGVRYLKPLRATAERYYRKLDLSVSEIEAD GSNLPMFLDSLSEADLKNFRSWVRIFLDVDAFPKRQGDQVMVMAQGKNDPKPFNIADMGFGISQVLPIAAQLWATTRPGS WTQLTSMVVLEQPELHLHPDSQARLADVFAGTIGATNPRSPRTPSILVETHSQHLVNRLGQLVESGRLAAEDVSIILFES SGGPSPSTKVRISSFSAEGVLQNWPYGFFEPEIE
Sequences:
>Translated_514_residues MGGLSHLGVKNLRSLRCVPAVRIAPITVLLGRNSVGKSTFARIFPLFRQSSERKKKSPVLWFGDLVDFGSLERSVTEGEK EIGFTFHIDVERPTKKGTVPWHQRRGKTLAEVSITLVEDTQQTGHAKNVTVKLLGGEISIDPSKEVSMNTPFFVNGKRYD PITKDHGTVTFQGDILPLIYFYLYQKDPKGTASWVQSANHWEDLPTQVIRRHVHSNTSAVTCRKIANRVPVGTVEEIEKA LVEIPGPPSWRAVAQSGNTKSIAAQLHHALLVSHTDEIFRQVDAALRSYFQGVRYLKPLRATAERYYRKLDLSVSEIEAD GSNLPMFLDSLSEADLKNFRSWVRIFLDVDAFPKRQGDQVMVMAQGKNDPKPFNIADMGFGISQVLPIAAQLWATTRPGS WTQLTSMVVLEQPELHLHPDSQARLADVFAGTIGATNPRSPRTPSILVETHSQHLVNRLGQLVESGRLAAEDVSIILFES SGGPSPSTKVRISSFSAEGVLQNWPYGFFEPEIE >Mature_513_residues GGLSHLGVKNLRSLRCVPAVRIAPITVLLGRNSVGKSTFARIFPLFRQSSERKKKSPVLWFGDLVDFGSLERSVTEGEKE IGFTFHIDVERPTKKGTVPWHQRRGKTLAEVSITLVEDTQQTGHAKNVTVKLLGGEISIDPSKEVSMNTPFFVNGKRYDP ITKDHGTVTFQGDILPLIYFYLYQKDPKGTASWVQSANHWEDLPTQVIRRHVHSNTSAVTCRKIANRVPVGTVEEIEKAL VEIPGPPSWRAVAQSGNTKSIAAQLHHALLVSHTDEIFRQVDAALRSYFQGVRYLKPLRATAERYYRKLDLSVSEIEADG SNLPMFLDSLSEADLKNFRSWVRIFLDVDAFPKRQGDQVMVMAQGKNDPKPFNIADMGFGISQVLPIAAQLWATTRPGSW TQLTSMVVLEQPELHLHPDSQARLADVFAGTIGATNPRSPRTPSILVETHSQHLVNRLGQLVESGRLAAEDVSIILFESS GGPSPSTKVRISSFSAEGVLQNWPYGFFEPEIE
Specific function: Unknown
COG id: COG4938
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57153; Mature: 57022
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGLSHLGVKNLRSLRCVPAVRIAPITVLLGRNSVGKSTFARIFPLFRQSSERKKKSPVL CCCCCCCCHHHHHHHHCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEE WFGDLVDFGSLERSVTEGEKEIGFTFHIDVERPTKKGTVPWHQRRGKTLAEVSITLVEDT EECCHHCCCHHHHHHHCCHHHCCEEEEEEECCCCCCCCCCHHHHCCCEEEHEEEEEEECC QQTGHAKNVTVKLLGGEISIDPSKEVSMNTPFFVNGKRYDPITKDHGTVTFQGDILPLIY HHCCCCCCEEEEEECCEEEECCCCCCCCCCCEEECCCCCCCCCCCCCEEEEECCHHHHHH FYLYQKDPKGTASWVQSANHWEDLPTQVIRRHVHSNTSAVTCRKIANRVPVGTVEEIEKA HHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHH LVEIPGPPSWRAVAQSGNTKSIAAQLHHALLVSHTDEIFRQVDAALRSYFQGVRYLKPLR HHCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATAERYYRKLDLSVSEIEADGSNLPMFLDSLSEADLKNFRSWVRIFLDVDAFPKRQGDQV HHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEE MVMAQGKNDPKPFNIADMGFGISQVLPIAAQLWATTRPGSWTQLTSMVVLEQPELHLHPD EEEECCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHEEEEEECCCEEECCC SQARLADVFAGTIGATNPRSPRTPSILVETHSQHLVNRLGQLVESGRLAAEDVSIILFES CHHHHHHHHHHHCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCEECCEEEEEEEC SGGPSPSTKVRISSFSAEGVLQNWPYGFFEPEIE CCCCCCCCEEEEECCCCCCCHHHCCCCCCCCCCC >Mature Secondary Structure GGLSHLGVKNLRSLRCVPAVRIAPITVLLGRNSVGKSTFARIFPLFRQSSERKKKSPVL CCCCCCCHHHHHHHHCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEE WFGDLVDFGSLERSVTEGEKEIGFTFHIDVERPTKKGTVPWHQRRGKTLAEVSITLVEDT EECCHHCCCHHHHHHHCCHHHCCEEEEEEECCCCCCCCCCHHHHCCCEEEHEEEEEEECC QQTGHAKNVTVKLLGGEISIDPSKEVSMNTPFFVNGKRYDPITKDHGTVTFQGDILPLIY HHCCCCCCEEEEEECCEEEECCCCCCCCCCCEEECCCCCCCCCCCCCEEEEECCHHHHHH FYLYQKDPKGTASWVQSANHWEDLPTQVIRRHVHSNTSAVTCRKIANRVPVGTVEEIEKA HHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHH LVEIPGPPSWRAVAQSGNTKSIAAQLHHALLVSHTDEIFRQVDAALRSYFQGVRYLKPLR HHCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATAERYYRKLDLSVSEIEADGSNLPMFLDSLSEADLKNFRSWVRIFLDVDAFPKRQGDQV HHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEE MVMAQGKNDPKPFNIADMGFGISQVLPIAAQLWATTRPGSWTQLTSMVVLEQPELHLHPD EEEECCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHEEEEEECCCEEECCC SQARLADVFAGTIGATNPRSPRTPSILVETHSQHLVNRLGQLVESGRLAAEDVSIILFES CHHHHHHHHHHHCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCEECCEEEEEEEC SGGPSPSTKVRISSFSAEGVLQNWPYGFFEPEIE CCCCCCCCEEEEECCCCCCCHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA