| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is fixI [H]
Identifier: 91790145
GI number: 91790145
Start: 4538890
End: 4541172
Strand: Reverse
Name: fixI [H]
Synonym: Bpro_4307
Alternate gene names: 91790145
Gene position: 4541172-4538890 (Counterclockwise)
Preceding gene: 91790149
Following gene: 91790144
Centisome position: 87.33
GC content: 71.05
Gene sequence:
>2283_bases ATGCAAACTGCCACCCTTGCCCTGGGCACAGAGCCTGTTGCCCCGATCAATGCCGCCTGGGCTGCGCTGGACGAGCGCGC CGAATGGGAGGGCTTCAGCCGGCCCGTGGCCGGGCGCGATGGCTGGTGGGAGACGTACCTCGCGATTGACGGCATGCACT GCGCTGCCTGCTCGCTCACGGTGGAGGAAGCACTCGGCCAGTTGCCGGACGTCGACGGCGTACAGGTCAATGGGGCGACC GCGATGGCGCGCCTCGTGTGGCGGCCCGGGCGCACCCGCCCCTCGGCCTGGATGGCCGCGCTGCAGCGGGCCGGCTACAC GGCGCTGCCGGCGGGCGACATGCTGCTGGCCGCGCCGCGGCTGCAGGCCCAGCGCCTGATGCTCTGGCGCTGGCTGGTCG CGGGCTTTTGCATGATGCAGGTGATGATGTATGCCGTGCCCGCCTACGTGGCCGGCCCCGGCGAGATCACGCCGGATGTG CAGGCGCTGCTGCGCTGGGCCTCCTGGGTGCTGACGTTGCCGGTCGTGCTGTTTTCCTGCTGGCCGTTCTTTGCCACGGC GCTGCGTGACCTGCGCGGCCGGCGCATCGGCATGGATGTGCCGGTGGCGCTGGGCATCCTCATCACCTTTGGTGCCAGCA CGGCCGCCACCTTCGATGCTTCCGGGCCGTGGGGTGCCGAGGTCTGGTACGACTCGTTGACCATGTTCGTGTTCTTCCTG TTGTCCGGCCGCCTGCTGGAGCAGCGCCTGCGTGACCGCACGGCCGGCTCGCTGGAGGCGCTGATGCGCAGGCTGCCCGA CAGTGTGGAGCGGCAAGGGGCCGACGGCCAGTATGAGCGCGTGGCCCTGCGGCGCCTCGTCGTGGGCGATCTGATCCGTG TGCTGCCGGGCGAAGTCATTCCCGCCGACGGCACGGTGACTGCGGGCGACAGCCGGGTGGACGAAGCCCTGCTGACGGGT GAATCCACGCCGCTGCAGCGGTGCGCCGGTGGCGCGGTGATCGCCGGCAGCCACAACCTCTCGGGCCTGCTGCTGGTGCG GGTGGAGCGCGTGGGTGCTGAGACGCGGTATGCCAGCATCGTGGCGCTGATGGAGCAGGCCTCGGTGCAAAAGCCGCGGC TGGCCCAGGTTGCCGATCGCATTGCCAACCCCTTCCTGCTGGGGGTGCTGCTGGCCAGCGCCGCTGCGGCGTTGTGGTGG TGGCCGGTGGATCCGGCGCATGCCATCAGCGTGGCGGTTGCCGTCCTCATCGTCACCTGCCCCTGCGCGCTGTCGCTGGC CACGCCGGCCGCCACGCTGGCCGCGGCAGGCGCGCTGGCGCGCCGCGGCGTGCTGGTGCGCCGCCTGCAGGCGCTGGAGT CCGGCGCATCGGTGGACACGGTGGTGTTCGACAAGACCGGCACGCTGACCGAGGACCGTATGGCGGTGCTCATGCGCCGG GTCCGCCCGGGCACAGACCCGACACAGGCCCTGCATCTTGCGGCCGCGCTGGCGCAGCATTCGCACCACCCGGTGTCTCG CGCGATTGTGCAGGCCGTTGCTGGCGCAGTACCAGGCGCGGAGAACATCACGGAGATAGCCGGCCATGGACTGCAGGGCC AGATCGCCGGGGGTGCGGCAGGGCGCGTGTTGCGGCTGGGTTCGGCCGCATTTTGCGGCGCGCCGCTGCAGGATACGCCG GCCCATGGCCCGCAGGTGCACCTGGCCGACGAGCGGGGCTGGCTGGCCAGCTTCGAATTTGAGGAGGCGTTGCGGCCCGA TGCCAGGCCTGCGGTCGGCAGGCTGCAGGCGATGGGCCTGCGGGTGCTGCTTCTCTCGGGCGACCAGGGTGGTGCCGTGT TGCGGCTGGCCGCCCGCGCTGGTATCGATGAGGCCTACGGTCAGCGCACACCGGAGGACAAGCTGGCGCATGTGCGCTCC CTGCAACTGCGCGGCCGGCGCGTTGCGATGGTGGGCGACGGCATGAACGACGGGCCGGTGCTGGCCTGCGCAGACCTGTC GGTGGCCATGGGGCACGCCGTGCCGCTGGCACAGGCGAAGTCCGACTTCGTGGTGCTGGGCAGCCGGCTGTCCGATGTGC CTGCCTTGCTGCTGCAGGCGCGCCGCACGCGGACCGTCGTGCGGCAAAACCTGCTGTGGGCCGCCGTCTACAACGCGGTC TGCGTGCCGCTGGCCGTGCTCGGATTCATGCCACCCTGGCTGGCCGGGTTGGGCATGGCGGCCAGTTCATTGCTGGTGGT GCTGAATTCGGCACGGCTGGCGCGTATTCCCGGAGCCGCTTGA
Upstream 100 bases:
>100_bases TCCTTTTTTTTGGGTAGCGCCTTCAGCTTAGGCGCACGGGTCCGGTTCCGGATTGATCCAGATCAACGGGACGGTTCGAT GCGCTGGTTAACCTTGCCCC
Downstream 100 bases:
>100_bases ATGGACATCCTCTTCCTGCTGATTCCGCTGTCGGTCGTGCTGGCGTTGCTCATACTCGGCGCGCTGGGCTGGGCTGTCTG GCGTGGCCAGTTCGAGGCGC
Product: heavy metal translocating P-type ATPase
Products: ADP; Orthophosphate. [C]
Alternate protein names: E1-E2 type cation ATPase FixI [H]
Number of amino acids: Translated: 760; Mature: 760
Protein sequence:
>760_residues MQTATLALGTEPVAPINAAWAALDERAEWEGFSRPVAGRDGWWETYLAIDGMHCAACSLTVEEALGQLPDVDGVQVNGAT AMARLVWRPGRTRPSAWMAALQRAGYTALPAGDMLLAAPRLQAQRLMLWRWLVAGFCMMQVMMYAVPAYVAGPGEITPDV QALLRWASWVLTLPVVLFSCWPFFATALRDLRGRRIGMDVPVALGILITFGASTAATFDASGPWGAEVWYDSLTMFVFFL LSGRLLEQRLRDRTAGSLEALMRRLPDSVERQGADGQYERVALRRLVVGDLIRVLPGEVIPADGTVTAGDSRVDEALLTG ESTPLQRCAGGAVIAGSHNLSGLLLVRVERVGAETRYASIVALMEQASVQKPRLAQVADRIANPFLLGVLLASAAAALWW WPVDPAHAISVAVAVLIVTCPCALSLATPAATLAAAGALARRGVLVRRLQALESGASVDTVVFDKTGTLTEDRMAVLMRR VRPGTDPTQALHLAAALAQHSHHPVSRAIVQAVAGAVPGAENITEIAGHGLQGQIAGGAAGRVLRLGSAAFCGAPLQDTP AHGPQVHLADERGWLASFEFEEALRPDARPAVGRLQAMGLRVLLLSGDQGGAVLRLAARAGIDEAYGQRTPEDKLAHVRS LQLRGRRVAMVGDGMNDGPVLACADLSVAMGHAVPLAQAKSDFVVLGSRLSDVPALLLQARRTRTVVRQNLLWAAVYNAV CVPLAVLGFMPPWLAGLGMAASSLLVVLNSARLARIPGAA
Sequences:
>Translated_760_residues MQTATLALGTEPVAPINAAWAALDERAEWEGFSRPVAGRDGWWETYLAIDGMHCAACSLTVEEALGQLPDVDGVQVNGAT AMARLVWRPGRTRPSAWMAALQRAGYTALPAGDMLLAAPRLQAQRLMLWRWLVAGFCMMQVMMYAVPAYVAGPGEITPDV QALLRWASWVLTLPVVLFSCWPFFATALRDLRGRRIGMDVPVALGILITFGASTAATFDASGPWGAEVWYDSLTMFVFFL LSGRLLEQRLRDRTAGSLEALMRRLPDSVERQGADGQYERVALRRLVVGDLIRVLPGEVIPADGTVTAGDSRVDEALLTG ESTPLQRCAGGAVIAGSHNLSGLLLVRVERVGAETRYASIVALMEQASVQKPRLAQVADRIANPFLLGVLLASAAAALWW WPVDPAHAISVAVAVLIVTCPCALSLATPAATLAAAGALARRGVLVRRLQALESGASVDTVVFDKTGTLTEDRMAVLMRR VRPGTDPTQALHLAAALAQHSHHPVSRAIVQAVAGAVPGAENITEIAGHGLQGQIAGGAAGRVLRLGSAAFCGAPLQDTP AHGPQVHLADERGWLASFEFEEALRPDARPAVGRLQAMGLRVLLLSGDQGGAVLRLAARAGIDEAYGQRTPEDKLAHVRS LQLRGRRVAMVGDGMNDGPVLACADLSVAMGHAVPLAQAKSDFVVLGSRLSDVPALLLQARRTRTVVRQNLLWAAVYNAV CVPLAVLGFMPPWLAGLGMAASSLLVVLNSARLARIPGAA >Mature_760_residues MQTATLALGTEPVAPINAAWAALDERAEWEGFSRPVAGRDGWWETYLAIDGMHCAACSLTVEEALGQLPDVDGVQVNGAT AMARLVWRPGRTRPSAWMAALQRAGYTALPAGDMLLAAPRLQAQRLMLWRWLVAGFCMMQVMMYAVPAYVAGPGEITPDV QALLRWASWVLTLPVVLFSCWPFFATALRDLRGRRIGMDVPVALGILITFGASTAATFDASGPWGAEVWYDSLTMFVFFL LSGRLLEQRLRDRTAGSLEALMRRLPDSVERQGADGQYERVALRRLVVGDLIRVLPGEVIPADGTVTAGDSRVDEALLTG ESTPLQRCAGGAVIAGSHNLSGLLLVRVERVGAETRYASIVALMEQASVQKPRLAQVADRIANPFLLGVLLASAAAALWW WPVDPAHAISVAVAVLIVTCPCALSLATPAATLAAAGALARRGVLVRRLQALESGASVDTVVFDKTGTLTEDRMAVLMRR VRPGTDPTQALHLAAALAQHSHHPVSRAIVQAVAGAVPGAENITEIAGHGLQGQIAGGAAGRVLRLGSAAFCGAPLQDTP AHGPQVHLADERGWLASFEFEEALRPDARPAVGRLQAMGLRVLLLSGDQGGAVLRLAARAGIDEAYGQRTPEDKLAHVRS LQLRGRRVAMVGDGMNDGPVLACADLSVAMGHAVPLAQAKSDFVVLGSRLSDVPALLLQARRTRTVVRQNLLWAAVYNAV CVPLAVLGFMPPWLAGLGMAASSLLVVLNSARLARIPGAA
Specific function: FixI is a pump of a specific cation involved in symbiotic nitrogen fixation. The four proteins FixG, FixH, FixI, and FixS may participate in a membrane-bound complex coupling the FixI cation pump with a redox process catalyzed by FixG [H]
COG id: COG2217
COG function: function code P; Cation transport ATPase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HMA domain [H]
Homologues:
Organism=Homo sapiens, GI55743071, Length=514, Percent_Identity=28.4046692607004, Blast_Score=187, Evalue=4e-47, Organism=Homo sapiens, GI115529486, Length=539, Percent_Identity=28.2003710575139, Blast_Score=179, Evalue=1e-44, Organism=Homo sapiens, GI55743073, Length=500, Percent_Identity=25.8, Blast_Score=139, Evalue=1e-32, Organism=Homo sapiens, GI153946397, Length=219, Percent_Identity=28.7671232876712, Blast_Score=68, Evalue=3e-11, Organism=Escherichia coli, GI1786691, Length=759, Percent_Identity=32.6745718050066, Blast_Score=296, Evalue=4e-81, Organism=Escherichia coli, GI1789879, Length=735, Percent_Identity=29.5238095238095, Blast_Score=207, Evalue=2e-54, Organism=Escherichia coli, GI1786914, Length=446, Percent_Identity=28.47533632287, Blast_Score=122, Evalue=9e-29, Organism=Escherichia coli, GI2367363, Length=573, Percent_Identity=23.2111692844677, Blast_Score=92, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17556548, Length=519, Percent_Identity=28.5163776493256, Blast_Score=159, Evalue=5e-39, Organism=Saccharomyces cerevisiae, GI6319772, Length=636, Percent_Identity=29.7169811320755, Blast_Score=256, Evalue=1e-68, Organism=Saccharomyces cerevisiae, GI6320475, Length=562, Percent_Identity=30.0711743772242, Blast_Score=232, Evalue=1e-61, Organism=Saccharomyces cerevisiae, GI6325221, Length=584, Percent_Identity=22.6027397260274, Blast_Score=107, Evalue=9e-24, Organism=Saccharomyces cerevisiae, GI6321430, Length=561, Percent_Identity=23.1729055258467, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI221329854, Length=520, Percent_Identity=29.8076923076923, Blast_Score=186, Evalue=4e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008250 - InterPro: IPR006403 - InterPro: IPR006416 - InterPro: IPR001757 - InterPro: IPR018303 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR017969 - InterPro: IPR006121 - InterPro: IPR000150 [H]
Pfam domain/function: PF00122 E1-E2_ATPase; PF00403 HMA; PF00702 Hydrolase [H]
EC number: 3.6.3.4 [C]
Molecular weight: Translated: 80574; Mature: 80574
Theoretical pI: Translated: 8.27; Mature: 8.27
Prosite motif: PS00154 ATPASE_E1_E2 ; PS50846 HMA_2 ; PS01229 COF_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTATLALGTEPVAPINAAWAALDERAEWEGFSRPVAGRDGWWETYLAIDGMHCAACSLT CCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHEECCCHHHHHHEE VEEALGQLPDVDGVQVNGATAMARLVWRPGRTRPSAWMAALQRAGYTALPAGDMLLAAPR HHHHHHCCCCCCCEEECCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCEEECCH LQAQRLMLWRWLVAGFCMMQVMMYAVPAYVAGPGEITPDVQALLRWASWVLTLPVVLFSC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH WPFFATALRDLRGRRIGMDVPVALGILITFGASTAATFDASGPWGAEVWYDSLTMFVFFL HHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHH LSGRLLEQRLRDRTAGSLEALMRRLPDSVERQGADGQYERVALRRLVVGDLIRVLPGEVI HHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEE PADGTVTAGDSRVDEALLTGESTPLQRCAGGAVIAGSHNLSGLLLVRVERVGAETRYASI CCCCCEECCCHHHHHHHHCCCCCHHHHHCCCEEEECCCCCCEEEEEEEHHHCCHHHHHHH VALMEQASVQKPRLAQVADRIANPFLLGVLLASAAAALWWWPVDPAHAISVAVAVLIVTC HHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHH PCALSLATPAATLAAAGALARRGVLVRRLQALESGASVDTVVFDKTGTLTEDRMAVLMRR HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHH VRPGTDPTQALHLAAALAQHSHHPVSRAIVQAVAGAVPGAENITEIAGHGLQGQIAGGAA HCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEECCCCC GRVLRLGSAAFCGAPLQDTPAHGPQVHLADERGWLASFEFEEALRPDARPAVGRLQAMGL CHHHEECCHHHCCCCCCCCCCCCCEEEEECCCCCEECCCHHHHCCCCCCHHHHHHHHCCE RVLLLSGDQGGAVLRLAARAGIDEAYGQRTPEDKLAHVRSLQLRGRRVAMVGDGMNDGPV EEEEEECCCCCCEEEEHHHCCCHHHHCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCE LACADLSVAMGHAVPLAQAKSDFVVLGSRLSDVPALLLQARRTRTVVRQNLLWAAVYNAV EEEECHHHHHCCCCCHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CVPLAVLGFMPPWLAGLGMAASSLLVVLNSARLARIPGAA HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHCCCCCCC >Mature Secondary Structure MQTATLALGTEPVAPINAAWAALDERAEWEGFSRPVAGRDGWWETYLAIDGMHCAACSLT CCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHEECCCHHHHHHEE VEEALGQLPDVDGVQVNGATAMARLVWRPGRTRPSAWMAALQRAGYTALPAGDMLLAAPR HHHHHHCCCCCCCEEECCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCEEECCH LQAQRLMLWRWLVAGFCMMQVMMYAVPAYVAGPGEITPDVQALLRWASWVLTLPVVLFSC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH WPFFATALRDLRGRRIGMDVPVALGILITFGASTAATFDASGPWGAEVWYDSLTMFVFFL HHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHH LSGRLLEQRLRDRTAGSLEALMRRLPDSVERQGADGQYERVALRRLVVGDLIRVLPGEVI HHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEE PADGTVTAGDSRVDEALLTGESTPLQRCAGGAVIAGSHNLSGLLLVRVERVGAETRYASI CCCCCEECCCHHHHHHHHCCCCCHHHHHCCCEEEECCCCCCEEEEEEEHHHCCHHHHHHH VALMEQASVQKPRLAQVADRIANPFLLGVLLASAAAALWWWPVDPAHAISVAVAVLIVTC HHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHH PCALSLATPAATLAAAGALARRGVLVRRLQALESGASVDTVVFDKTGTLTEDRMAVLMRR HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHH VRPGTDPTQALHLAAALAQHSHHPVSRAIVQAVAGAVPGAENITEIAGHGLQGQIAGGAA HCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEECCCCC GRVLRLGSAAFCGAPLQDTPAHGPQVHLADERGWLASFEFEEALRPDARPAVGRLQAMGL CHHHEECCHHHCCCCCCCCCCCCCEEEEECCCCCEECCCHHHHCCCCCCHHHHHHHHCCE RVLLLSGDQGGAVLRLAARAGIDEAYGQRTPEDKLAHVRSLQLRGRRVAMVGDGMNDGPV EEEEEECCCCCCEEEEHHHCCCHHHHCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCE LACADLSVAMGHAVPLAQAKSDFVVLGSRLSDVPALLLQARRTRTVVRQNLLWAAVYNAV EEEECHHHHHCCCCCHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CVPLAVLGFMPPWLAGLGMAASSLLVVLNSARLARIPGAA HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Cu [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; H2O [C]
Specific reaction: ATP + H2O = ADP + Orthophosphate. [C]
General reaction: Phosphorous acid anhydride hydrolysis [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA