| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is uspA [C]
Identifier: 91790136
GI number: 91790136
Start: 4532921
End: 4533388
Strand: Direct
Name: uspA [C]
Synonym: Bpro_4298
Alternate gene names: 91790136
Gene position: 4532921-4533388 (Clockwise)
Preceding gene: 91790130
Following gene: 91790146
Centisome position: 87.17
GC content: 68.16
Gene sequence:
>468_bases ATGTACAAACGCATTCTCGTGCCCGTCGACGGTAGCGAAACCTCCAACAAGGCCCTGGTCACCGCATTGCAGTTCGCCAG GGACTTCGGCGGCCGGGTGCGGCTGGTCCATGTGGTGGAAGATCTGACCTACGTCACCGGCAACGACCCCTCTGGCTACT CGGGGGAACTGGCCACCGTCATGCGCGAAGCCGGCGAAAAGATCCTGGCCGGCGCCCTGGCCATTGCCCAATCGGCCGGC GTGGAAGCCGACTCCATGCTGTTCGACAAACCCGGCGAGCGGCTGGCGGAGACCGTGGCCGATGCGGCCAAGCGCTGGAA CGCAGACCTGATCGTCGCAGGCACCCACGGCCGGCGCGGCCTGGGCCGCGTGCTCATGGGCAGCGGCGCGGAGCAGATTG TCCGCCTGGCACCGGTGCCCGTGCTGGTGGTGCGGCTACCTGAGAGCAGCCCGCCGTCACCCGCCTGA
Upstream 100 bases:
>100_bases GCCAACAAAGTATTTCCCCGCTTGATCGACATCAACCCGGCCCGACGGCAAGCGCTCCACACTGCAGGCATCAGGCCATC ACCAGCAAAGGAGCCCCACC
Downstream 100 bases:
>100_bases ACCCCGTGACCCGGTGAATATCACGGCTCCTCAGCGACAGGGCAGCACGCCCTGCCTGCCGACCTGCTACTGCAGCTACT GCTGGGGGCAGCCGTCGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: USP MJ0531 [H]
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MYKRILVPVDGSETSNKALVTALQFARDFGGRVRLVHVVEDLTYVTGNDPSGYSGELATVMREAGEKILAGALAIAQSAG VEADSMLFDKPGERLAETVADAAKRWNADLIVAGTHGRRGLGRVLMGSGAEQIVRLAPVPVLVVRLPESSPPSPA
Sequences:
>Translated_155_residues MYKRILVPVDGSETSNKALVTALQFARDFGGRVRLVHVVEDLTYVTGNDPSGYSGELATVMREAGEKILAGALAIAQSAG VEADSMLFDKPGERLAETVADAAKRWNADLIVAGTHGRRGLGRVLMGSGAEQIVRLAPVPVLVVRLPESSPPSPA >Mature_155_residues MYKRILVPVDGSETSNKALVTALQFARDFGGRVRLVHVVEDLTYVTGNDPSGYSGELATVMREAGEKILAGALAIAQSAG VEADSMLFDKPGERLAETVADAAKRWNADLIVAGTHGRRGLGRVLMGSGAEQIVRLAPVPVLVVRLPESSPPSPA
Specific function: Required For Resistance To DNA-Damaging Agents. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the universal stress protein A family [H]
Homologues:
None
Paralogues:
None
Copy number: 1660 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1580 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 290 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 4003 Molecules/Cell In: Growth Phase, G
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014729 - InterPro: IPR006015 - InterPro: IPR006016 [H]
Pfam domain/function: PF00582 Usp [H]
EC number: NA
Molecular weight: Translated: 16336; Mature: 16336
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKRILVPVDGSETSNKALVTALQFARDFGGRVRLVHVVEDLTYVTGNDPSGYSGELATV CCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEHHCEEEECCCCCCCCCHHHHH MREAGEKILAGALAIAQSAGVEADSMLFDKPGERLAETVADAAKRWNADLIVAGTHGRRG HHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCC LGRVLMGSGAEQIVRLAPVPVLVVRLPESSPPSPA CCHHHHCCCHHHHHHHCCCCEEEEECCCCCCCCCC >Mature Secondary Structure MYKRILVPVDGSETSNKALVTALQFARDFGGRVRLVHVVEDLTYVTGNDPSGYSGELATV CCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEHHCEEEECCCCCCCCCHHHHH MREAGEKILAGALAIAQSAGVEADSMLFDKPGERLAETVADAAKRWNADLIVAGTHGRRG HHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCC LGRVLMGSGAEQIVRLAPVPVLVVRLPESSPPSPA CCHHHHCCCHHHHHHHCCCCEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]