| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91790146
Identifier: 91790146
GI number: 91790146
Start: 4541280
End: 4541723
Strand: Direct
Name: 91790146
Synonym: Bpro_4308
Alternate gene names: NA
Gene position: 4541280-4541723 (Clockwise)
Preceding gene: 91790136
Following gene: 91790147
Centisome position: 87.33
GC content: 64.64
Gene sequence:
>444_bases ATGTACCAACGCATTCTTGTCGCAACCGATGGTTCCCCCCTCTCGAAAAAGGCCGTCCGCAGCGCGATCGGGCTGGCCAC CGCGCTTGACGCCGAGCTCGTGGCGCTCAATGTCGTGCCACGCTATCCCATGAGCTATTTCGAGGGCAACGTGTCGATCT CGCTCCAGGAGGTCGGCCGCATCGAGAAGCAATGGGCCACCGAGGGCCAGGCCATGGTTGATGCGGTGCAGCAGGCCGCG CAGGCCGAAGGGCTCCGGGCCAAGGCCGTCGTCACGCGCTCCAACCTGGTGGCCGAGGCCATCATGGCCGCCGCCAGAAA ACACAAGTGCGACCTGATCGTCATGGCCTCGCACGGCCGCAAGGGCATCAAGCGCGTGCTGCTGGGCAGCGAAACGCAGC ATGTACTGGCGCACAGCACCACGCCCGTGTTAGTGTTGCGTTGA
Upstream 100 bases:
>100_bases GGTTAACCAGCGCATCGAACCGTCCCGTTGATCTGGATCAATCCGGAACCGGACCCGTGCGCCTAAGCTGAAGGCGCTAC CCAAAAAAAAGGAGAAGAAC
Downstream 100 bases:
>100_bases ATTTGGTCCACCTGGAGGAGAAAAAAAATGAAAGTCCTGTTCGCCGCTGATGGCAGCAAATACACCAAGAAGGCCCTGGC CTTCCTCGTTACCCATGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: USP MJ0531 [H]
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MYQRILVATDGSPLSKKAVRSAIGLATALDAELVALNVVPRYPMSYFEGNVSISLQEVGRIEKQWATEGQAMVDAVQQAA QAEGLRAKAVVTRSNLVAEAIMAAARKHKCDLIVMASHGRKGIKRVLLGSETQHVLAHSTTPVLVLR
Sequences:
>Translated_147_residues MYQRILVATDGSPLSKKAVRSAIGLATALDAELVALNVVPRYPMSYFEGNVSISLQEVGRIEKQWATEGQAMVDAVQQAA QAEGLRAKAVVTRSNLVAEAIMAAARKHKCDLIVMASHGRKGIKRVLLGSETQHVLAHSTTPVLVLR >Mature_147_residues MYQRILVATDGSPLSKKAVRSAIGLATALDAELVALNVVPRYPMSYFEGNVSISLQEVGRIEKQWATEGQAMVDAVQQAA QAEGLRAKAVVTRSNLVAEAIMAAARKHKCDLIVMASHGRKGIKRVLLGSETQHVLAHSTTPVLVLR
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the universal stress protein A family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014729 - InterPro: IPR006015 - InterPro: IPR006016 [H]
Pfam domain/function: PF00582 Usp [H]
EC number: NA
Molecular weight: Translated: 15816; Mature: 15816
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYQRILVATDGSPLSKKAVRSAIGLATALDAELVALNVVPRYPMSYFEGNVSISLQEVGR CCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHCCCEEEEHHHHHH IEKQWATEGQAMVDAVQQAAQAEGLRAKAVVTRSNLVAEAIMAAARKHKCDLIVMASHGR HHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHCCCCEEEEECCCC KGIKRVLLGSETQHVLAHSTTPVLVLR HHHHHHHCCCCCHHHEEECCCCEEEEC >Mature Secondary Structure MYQRILVATDGSPLSKKAVRSAIGLATALDAELVALNVVPRYPMSYFEGNVSISLQEVGR CCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHCCCEEEEHHHHHH IEKQWATEGQAMVDAVQQAAQAEGLRAKAVVTRSNLVAEAIMAAARKHKCDLIVMASHGR HHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHCCCCEEEEECCCC KGIKRVLLGSETQHVLAHSTTPVLVLR HHHHHHHCCCCCHHHEEECCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]