| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91790126
Identifier: 91790126
GI number: 91790126
Start: 4524291
End: 4525637
Strand: Direct
Name: 91790126
Synonym: Bpro_4288
Alternate gene names: NA
Gene position: 4524291-4525637 (Clockwise)
Preceding gene: 91790125
Following gene: 91790128
Centisome position: 87.0
GC content: 67.56
Gene sequence:
>1347_bases ATGCTTGAGCCGGCCGATTTCACCCTGGGCTGCATCATCGTCGGCGCGCTGCTGATCGTGATGACCCTGAGCGGCTCCTT CATTGCACGCCTGCCGCTGAGCGCGGCGATGCTCTACCTCGGTGTGGGCGTGGCCATCGGGCCGATGGGTCTGGGCCTGC TCAAGCTTGACGCGCTGAAGAACGTGGCGCTGCTGGAACGGCTCACCGAGGTGGCCGTGCTGATATCGCTGTTCACCGCG GGCATGAAGCTGAAACTGCCGCTGACAGACCCGCGCTGGCGCATCCCGGTGCAGCTGGCCACGGTGTCGATGTTGGCCAC GGTGGGCGCCATCACGGCACTCGGCGTGTGGGGACTGGGCTTGCCGCTGGGGGCGGCCGTGCTGCTTGGCGCGATTCTGG CCCCCACCGACCCGGTGCTGGCGTCTGACGTGCAGGTGGCCAATGTGGGGGACCGGGATCGCCTGCGCTTTGGCCTGACC GGCGAAGGCGGCCTCAACGACGGCTCGGCCTTCCCCTTCGTCATGCTGGGGCTGGGCCTGCTGGGCCTGCACGAACTGGG CGACGGCGGCTGGCGCTGGTGGACCGTCGACGTGCTGTGGGCGGTGGCCGGCGGCCTCGGCCTGGGCTACCTGATGGGCA CGCTGATCGGCCGCGTCATCCTCTACCTGCGCATGCGCCATCGCGAGGCGCTGGGCTCTGACGAATTCATTGCCCTGGGG CTGATCGCCCTGACCTACGGCCTGGCCCTGGTCAGCCAGACCTACGGCTTTCTTGCCGTGTTCGCGGCCGGGCTGGCGCT CCGGCGCATTGACGAGTTGCCGCAAGTGCCGGTCGCCCCGCCTGCGCCCGAGCTGAGCGCCGCAGAACAGCATGCCTCTG GCGCCGAAGCTCCCGCCCACATGATGAACGAGGTGCAGCGCTTCAACAGCCAGCTGGAAAGCTTTGTCGAGGTGGCCATG GTGCTGACCGTGGGGGTGCTGGTTGCCACGGTACGCTTTCACAGCGAAGTGCTGTGGTTCATCCCGGTGCTGTTCCTGGT GATTCGCCCGCTGGCCGTGTACCTTGGCCTGCTGGGCACGCCCGTGAAGGGCGCGCAGCGCCGCCTGATGGGCTGGTTCG GCATTCGCGGCATTGGTTCGCTGTATTACCTGCTCTACGCGATCAGCCACGACATTGAAACAGCACTGGCGCAGCGCCTG CTGTCCATCACGCTGGCCGTGGTCATTGCCTCGGTCATTGCGCACGGCATTTCGGTCACGCCGCTGATGAAGCGCTATGA GGCGCGCAAGACATCGCGCCGGGGCCCGGACGCCGACCGGCCGGCGTCCGGCACGTCACCTGAGTAA
Upstream 100 bases:
>100_bases CTGGCTGAACCACAAACGGGTTTGCTTTAAGCTGTGCCAATGACCAACACAGCATTTTTCGCAGGCAGGCGACGGCAGAA CCCGGCCCCACCATCCCGCC
Downstream 100 bases:
>100_bases CAGCCGCAGCGCTCCGCACAGGGGGCCGCTGCAACGTGTATCAAGTTATTCGTAACCAACCCCCGACTCCCCGACTGCTG AAGCAAGAGGGCGCAAGCAG
Product: sodium/hydrogen exchanger
Products: NA
Alternate protein names: Sodium/Hydrogen Exchanger Family Protein; Na+/H+ Antiporter; Cation Transport Related Protein; CPA1 Family Na(+)/H(+) Antiporter; Na+/H+ Antiporter-Like Protein; Na(+)/H(+) Antiporter; Cell Volume Regulation Protein A; Na+/H+ Antiporter CPA1 Family Protein; Sodium/Proton Antiporter CPA1 Family; CPA1 Family Na+/H+ Antiporter; NhaP-Type Na+/H+ And K+/H+ Antiporter; Cation Transporter-Like Protein; Transporter CPA2 Family
Number of amino acids: Translated: 448; Mature: 448
Protein sequence:
>448_residues MLEPADFTLGCIIVGALLIVMTLSGSFIARLPLSAAMLYLGVGVAIGPMGLGLLKLDALKNVALLERLTEVAVLISLFTA GMKLKLPLTDPRWRIPVQLATVSMLATVGAITALGVWGLGLPLGAAVLLGAILAPTDPVLASDVQVANVGDRDRLRFGLT GEGGLNDGSAFPFVMLGLGLLGLHELGDGGWRWWTVDVLWAVAGGLGLGYLMGTLIGRVILYLRMRHREALGSDEFIALG LIALTYGLALVSQTYGFLAVFAAGLALRRIDELPQVPVAPPAPELSAAEQHASGAEAPAHMMNEVQRFNSQLESFVEVAM VLTVGVLVATVRFHSEVLWFIPVLFLVIRPLAVYLGLLGTPVKGAQRRLMGWFGIRGIGSLYYLLYAISHDIETALAQRL LSITLAVVIASVIAHGISVTPLMKRYEARKTSRRGPDADRPASGTSPE
Sequences:
>Translated_448_residues MLEPADFTLGCIIVGALLIVMTLSGSFIARLPLSAAMLYLGVGVAIGPMGLGLLKLDALKNVALLERLTEVAVLISLFTA GMKLKLPLTDPRWRIPVQLATVSMLATVGAITALGVWGLGLPLGAAVLLGAILAPTDPVLASDVQVANVGDRDRLRFGLT GEGGLNDGSAFPFVMLGLGLLGLHELGDGGWRWWTVDVLWAVAGGLGLGYLMGTLIGRVILYLRMRHREALGSDEFIALG LIALTYGLALVSQTYGFLAVFAAGLALRRIDELPQVPVAPPAPELSAAEQHASGAEAPAHMMNEVQRFNSQLESFVEVAM VLTVGVLVATVRFHSEVLWFIPVLFLVIRPLAVYLGLLGTPVKGAQRRLMGWFGIRGIGSLYYLLYAISHDIETALAQRL LSITLAVVIASVIAHGISVTPLMKRYEARKTSRRGPDADRPASGTSPE >Mature_448_residues MLEPADFTLGCIIVGALLIVMTLSGSFIARLPLSAAMLYLGVGVAIGPMGLGLLKLDALKNVALLERLTEVAVLISLFTA GMKLKLPLTDPRWRIPVQLATVSMLATVGAITALGVWGLGLPLGAAVLLGAILAPTDPVLASDVQVANVGDRDRLRFGLT GEGGLNDGSAFPFVMLGLGLLGLHELGDGGWRWWTVDVLWAVAGGLGLGYLMGTLIGRVILYLRMRHREALGSDEFIALG LIALTYGLALVSQTYGFLAVFAAGLALRRIDELPQVPVAPPAPELSAAEQHASGAEAPAHMMNEVQRFNSQLESFVEVAM VLTVGVLVATVRFHSEVLWFIPVLFLVIRPLAVYLGLLGTPVKGAQRRLMGWFGIRGIGSLYYLLYAISHDIETALAQRL LSITLAVVIASVIAHGISVTPLMKRYEARKTSRRGPDADRPASGTSPE
Specific function: Unknown
COG id: COG0025
COG function: function code P; NhaP-type Na+/H+ and K+/H+ antiporters
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47608; Mature: 47608
Theoretical pI: Translated: 7.78; Mature: 7.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEPADFTLGCIIVGALLIVMTLSGSFIARLPLSAAMLYLGVGVAIGPMGLGLLKLDALK CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NVALLERLTEVAVLISLFTAGMKLKLPLTDPRWRIPVQLATVSMLATVGAITALGVWGLG HHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LPLGAAVLLGAILAPTDPVLASDVQVANVGDRDRLRFGLTGEGGLNDGSAFPFVMLGLGL HHHHHHHHHHHHHCCCCCCHHCCCEEECCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHH LGLHELGDGGWRWWTVDVLWAVAGGLGLGYLMGTLIGRVILYLRMRHREALGSDEFIALG HHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH LIALTYGLALVSQTYGFLAVFAAGLALRRIDELPQVPVAPPAPELSAAEQHASGAEAPAH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCHHH MMNEVQRFNSQLESFVEVAMVLTVGVLVATVRFHSEVLWFIPVLFLVIRPLAVYLGLLGT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PVKGAQRRLMGWFGIRGIGSLYYLLYAISHDIETALAQRLLSITLAVVIASVIAHGISVT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH PLMKRYEARKTSRRGPDADRPASGTSPE HHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLEPADFTLGCIIVGALLIVMTLSGSFIARLPLSAAMLYLGVGVAIGPMGLGLLKLDALK CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NVALLERLTEVAVLISLFTAGMKLKLPLTDPRWRIPVQLATVSMLATVGAITALGVWGLG HHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LPLGAAVLLGAILAPTDPVLASDVQVANVGDRDRLRFGLTGEGGLNDGSAFPFVMLGLGL HHHHHHHHHHHHHCCCCCCHHCCCEEECCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHH LGLHELGDGGWRWWTVDVLWAVAGGLGLGYLMGTLIGRVILYLRMRHREALGSDEFIALG HHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH LIALTYGLALVSQTYGFLAVFAAGLALRRIDELPQVPVAPPAPELSAAEQHASGAEAPAH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCHHH MMNEVQRFNSQLESFVEVAMVLTVGVLVATVRFHSEVLWFIPVLFLVIRPLAVYLGLLGT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PVKGAQRRLMGWFGIRGIGSLYYLLYAISHDIETALAQRLLSITLAVVIASVIAHGISVT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH PLMKRYEARKTSRRGPDADRPASGTSPE HHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA