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The map label for this gene is yddE [C]

Identifier: 91790080

GI number: 91790080

Start: 4468725

End: 4469720

Strand: Direct

Name: yddE [C]

Synonym: Bpro_4242

Alternate gene names: 91790080

Gene position: 4468725-4469720 (Clockwise)

Preceding gene: 91790079

Following gene: 91790081

Centisome position: 85.93

GC content: 67.37

Gene sequence:

>996_bases
ATGAAAACCAGACCCTTTCAACAAGTCGATGTGTTCACCGCGGTGCCTTATTTCGGCAACCCGCTGGCCGTGGTGCTCAA
CGCAAGCGGCCTCGATGACGAGGCGATGCAGCGCTTTGCCCGCTGGACGAACTTGTCGGAGACCACCTTCGTGCAACCGC
CAGCCAACCCGTCGGCCGACTACCGGGTGCGCATCTTCACGCCCGGCGGCGAGCTGCCCTTTGCCGGCCATCCCACGCTG
GGCAGCTGCCACAGCTGGCTGCAGGCGGGCGGACAGCCGCGCAACCCGGACTTCATCGTGCAGGAATGCAAGATTGGCCT
GGTGAAAATCCGGCGCGAAGGCGCGCGTCTGGCCTTCGCAGCGCCGCCCCTCAAGCGCTCCGCGCCCAGCCCGGCACTGC
TGGCCCAGGTCGCAGCCGCCCTCGGCGTGAAAGCGCCGCAGATTCTTGCCGCGCAGCTGCTCGACAACGGGCCGGTCTGG
CTCGGCCTGCTGCTGGACAGCCCGGAAACCGTGCTGCAGCTCACGCCCAACCATCTGGAGCTTGAAAAGCTGGACGCCAA
GGTTGGCGTGGCGGCCGTCTACCAACCCGAGGAAACGCCGTCGCTGATCGCCCGTGCCAACCGCGAAGCGCAGGCTTTTG
TTGCCCCCACGCTTGCCACTGCGTGTGCTGCGCTGCCCCCCGAGGGGGCTGAACTTGCTCGGGGCGGCCCTTCGCTGCGT
TCGATGGCCTCCATGACGGCCAGCGCCGAGCCGGACCTGGAAGTGCGCGCCTTTGTCGCCTCCATCGGCATCAACGAAGA
CCCGGTGACCGGCAGCCTCAATGCCGGCCTGGCGCAGTGGCTGATCGCGGAAGGGCATGTGCCCGAGCGCTATCTGGCCG
CGCAAGGGGTGTGCCTGGGCCGCGCGGGACAGGTTCATATCGAGCGCGATGCCTCAGGGCAGGTGTGGGTCGGCGGTGAA
TCGGTGACCTGCATCACCGGCCAGGTCATGCTGTAG

Upstream 100 bases:

>100_bases
CCGAACCTCGAGCGCTGGTATGCGGGCATCCGCGCCCGGCAAGCCAGCAAGGGCGTGCTGGACCTGGCGCTGTCCTGACA
CCTTCAAACGGACCCACACC

Downstream 100 bases:

>100_bases
ACCATGAAAATCGCGGCCCACGCCTCCCAGCCCCTGGCGTCGCAGGTCGACCACCTGGTGGTGGTGGCGGCCAGCTTGGC
CGAAGGCGTGCAGTGGTGCG

Product: phenazine biosynthesis PhzC/PhzF protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MKTRPFQQVDVFTAVPYFGNPLAVVLNASGLDDEAMQRFARWTNLSETTFVQPPANPSADYRVRIFTPGGELPFAGHPTL
GSCHSWLQAGGQPRNPDFIVQECKIGLVKIRREGARLAFAAPPLKRSAPSPALLAQVAAALGVKAPQILAAQLLDNGPVW
LGLLLDSPETVLQLTPNHLELEKLDAKVGVAAVYQPEETPSLIARANREAQAFVAPTLATACAALPPEGAELARGGPSLR
SMASMTASAEPDLEVRAFVASIGINEDPVTGSLNAGLAQWLIAEGHVPERYLAAQGVCLGRAGQVHIERDASGQVWVGGE
SVTCITGQVML

Sequences:

>Translated_331_residues
MKTRPFQQVDVFTAVPYFGNPLAVVLNASGLDDEAMQRFARWTNLSETTFVQPPANPSADYRVRIFTPGGELPFAGHPTL
GSCHSWLQAGGQPRNPDFIVQECKIGLVKIRREGARLAFAAPPLKRSAPSPALLAQVAAALGVKAPQILAAQLLDNGPVW
LGLLLDSPETVLQLTPNHLELEKLDAKVGVAAVYQPEETPSLIARANREAQAFVAPTLATACAALPPEGAELARGGPSLR
SMASMTASAEPDLEVRAFVASIGINEDPVTGSLNAGLAQWLIAEGHVPERYLAAQGVCLGRAGQVHIERDASGQVWVGGE
SVTCITGQVML
>Mature_331_residues
MKTRPFQQVDVFTAVPYFGNPLAVVLNASGLDDEAMQRFARWTNLSETTFVQPPANPSADYRVRIFTPGGELPFAGHPTL
GSCHSWLQAGGQPRNPDFIVQECKIGLVKIRREGARLAFAAPPLKRSAPSPALLAQVAAALGVKAPQILAAQLLDNGPVW
LGLLLDSPETVLQLTPNHLELEKLDAKVGVAAVYQPEETPSLIARANREAQAFVAPTLATACAALPPEGAELARGGPSLR
SMASMTASAEPDLEVRAFVASIGINEDPVTGSLNAGLAQWLIAEGHVPERYLAAQGVCLGRAGQVHIERDASGQVWVGGE
SVTCITGQVML

Specific function: Unknown

COG id: COG0384

COG function: function code R; Predicted epimerase, PhzC/PhzF homolog

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phzF family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6321818, Length=338, Percent_Identity=31.6568047337278, Blast_Score=157, Evalue=3e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003719 [H]

Pfam domain/function: PF02567 PhzC-PhzF [H]

EC number: NA

Molecular weight: Translated: 35017; Mature: 35017

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTRPFQQVDVFTAVPYFGNPLAVVLNASGLDDEAMQRFARWTNLSETTFVQPPANPSAD
CCCCCCCCEEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCC
YRVRIFTPGGELPFAGHPTLGSCHSWLQAGGQPRNPDFIVQECKIGLVKIRREGARLAFA
EEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHCCCEEEEECCCCEEEEE
APPLKRSAPSPALLAQVAAALGVKAPQILAAQLLDNGPVWLGLLLDSPETVLQLTPNHLE
CCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEECCCCEEEEECCCCEE
LEKLDAKVGVAAVYQPEETPSLIARANREAQAFVAPTLATACAALPPEGAELARGGPSLR
HHHHHCCCCEEEEECCCCCHHHHHHCCCCCCEEHHHHHHHHHHCCCCCCHHHHCCCHHHH
SMASMTASAEPDLEVRAFVASIGINEDPVTGSLNAGLAQWLIAEGHVPERYLAAQGVCLG
HHHHHHCCCCCCHHHEEEHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHCCEEEC
RAGQVHIERDASGQVWVGGESVTCITGQVML
CCCEEEEEECCCCCEEECCCEEEEEECEEEC
>Mature Secondary Structure
MKTRPFQQVDVFTAVPYFGNPLAVVLNASGLDDEAMQRFARWTNLSETTFVQPPANPSAD
CCCCCCCCEEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCC
YRVRIFTPGGELPFAGHPTLGSCHSWLQAGGQPRNPDFIVQECKIGLVKIRREGARLAFA
EEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHCCCEEEEECCCCEEEEE
APPLKRSAPSPALLAQVAAALGVKAPQILAAQLLDNGPVWLGLLLDSPETVLQLTPNHLE
CCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEECCCCEEEEECCCCEE
LEKLDAKVGVAAVYQPEETPSLIARANREAQAFVAPTLATACAALPPEGAELARGGPSLR
HHHHHCCCCEEEEECCCCCHHHHHHCCCCCCEEHHHHHHHHHHCCCCCCHHHHCCCHHHH
SMASMTASAEPDLEVRAFVASIGINEDPVTGSLNAGLAQWLIAEGHVPERYLAAQGVCLG
HHHHHHCCCCCCHHHEEEHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHCCEEEC
RAGQVHIERDASGQVWVGGESVTCITGQVML
CCCEEEEEECCCCCEEECCCEEEEEECEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]