| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is yliJ [H]
Identifier: 91790079
GI number: 91790079
Start: 4468082
End: 4468702
Strand: Direct
Name: yliJ [H]
Synonym: Bpro_4241
Alternate gene names: 91790079
Gene position: 4468082-4468702 (Clockwise)
Preceding gene: 91790078
Following gene: 91790080
Centisome position: 85.92
GC content: 65.22
Gene sequence:
>621_bases ATGCTGCATATCTGGGGACGCATCAGCTCCATCAATGTCAAGAAAGTCGTCTGGACCGCGCAGGAGCTCGGGCTGAACTT TCAGCGCACCGATGCCGGCGGCCTGTTCGGCATCGTCAAGACGCCCGAGTATGTGCGGCTGAATCCCAATTCCACGGTGC CCGTGATCGAGGACGACGACTTCGTGCTGTGGGAGTCCAATGTGATCGTGCGTTACCTGTGCGCCAAACATTCGGCGGGC CAGATGTACCCCACCGACCTGCGTGCGCGTTTTGACGCCGAGCGCTGGATGGACTGGCAGCAAACCACGCTGAACCCGGC CAGCCGCCCCGGCTTCTGGCAGCTGATCCGCACGCCGGCGGAGCAACGCAATGCGGCGGTGATTGCCGAGTCGAACGCCG CGGTCGAATCCCTGATGGCGACGCTGGACCGGCACCTCGCACAGCGCACCTACATGGCCGGCGAGCATTTTTCCATGGCC GACATTCCCCTGGCCTGCGAAGTGCACCGCTGGTTCGGCCTGCCGCAGCCGCGCCAGAGCCGGCCGAACCTCGAGCGCTG GTATGCGGGCATCCGCGCCCGGCAAGCCAGCAAGGGCGTGCTGGACCTGGCGCTGTCCTGA
Upstream 100 bases:
>100_bases CTGCCGCGCCGGCGGCTTCACAGGCCGCGACGAATCAGGCACTGGCAGCCAGCCTTTAAACCGTCCAAAATTCGTCAACA CTTCAGGAAAGACATCCAGC
Downstream 100 bases:
>100_bases CACCTTCAAACGGACCCACACCATGAAAACCAGACCCTTTCAACAAGTCGATGTGTTCACCGCGGTGCCTTATTTCGGCA ACCCGCTGGCCGTGGTGCTC
Product: glutathione S-transferase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MLHIWGRISSINVKKVVWTAQELGLNFQRTDAGGLFGIVKTPEYVRLNPNSTVPVIEDDDFVLWESNVIVRYLCAKHSAG QMYPTDLRARFDAERWMDWQQTTLNPASRPGFWQLIRTPAEQRNAAVIAESNAAVESLMATLDRHLAQRTYMAGEHFSMA DIPLACEVHRWFGLPQPRQSRPNLERWYAGIRARQASKGVLDLALS
Sequences:
>Translated_206_residues MLHIWGRISSINVKKVVWTAQELGLNFQRTDAGGLFGIVKTPEYVRLNPNSTVPVIEDDDFVLWESNVIVRYLCAKHSAG QMYPTDLRARFDAERWMDWQQTTLNPASRPGFWQLIRTPAEQRNAAVIAESNAAVESLMATLDRHLAQRTYMAGEHFSMA DIPLACEVHRWFGLPQPRQSRPNLERWYAGIRARQASKGVLDLALS >Mature_206_residues MLHIWGRISSINVKKVVWTAQELGLNFQRTDAGGLFGIVKTPEYVRLNPNSTVPVIEDDDFVLWESNVIVRYLCAKHSAG QMYPTDLRARFDAERWMDWQQTTLNPASRPGFWQLIRTPAEQRNAAVIAESNAAVESLMATLDRHLAQRTYMAGEHFSMA DIPLACEVHRWFGLPQPRQSRPNLERWYAGIRARQASKGVLDLALS
Specific function: Unknown
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI167466164, Length=159, Percent_Identity=30.188679245283, Blast_Score=74, Evalue=1e-13, Organism=Escherichia coli, GI87081789, Length=208, Percent_Identity=38.9423076923077, Blast_Score=143, Evalue=6e-36, Organism=Drosophila melanogaster, GI17864598, Length=192, Percent_Identity=28.125, Blast_Score=80, Evalue=9e-16, Organism=Drosophila melanogaster, GI17864594, Length=180, Percent_Identity=27.7777777777778, Blast_Score=78, Evalue=3e-15, Organism=Drosophila melanogaster, GI17864596, Length=190, Percent_Identity=27.3684210526316, Blast_Score=77, Evalue=5e-15, Organism=Drosophila melanogaster, GI45549270, Length=187, Percent_Identity=26.2032085561497, Blast_Score=74, Evalue=9e-14, Organism=Drosophila melanogaster, GI24646251, Length=193, Percent_Identity=26.4248704663212, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI24646249, Length=199, Percent_Identity=26.6331658291457, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI17933730, Length=173, Percent_Identity=29.4797687861272, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI17864592, Length=176, Percent_Identity=26.7045454545455, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI28571670, Length=175, Percent_Identity=22.8571428571429, Blast_Score=71, Evalue=4e-13, Organism=Drosophila melanogaster, GI24654975, Length=198, Percent_Identity=25.7575757575758, Blast_Score=71, Evalue=5e-13, Organism=Drosophila melanogaster, GI221378983, Length=161, Percent_Identity=27.9503105590062, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24646259, Length=161, Percent_Identity=27.9503105590062, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24654965, Length=196, Percent_Identity=27.5510204081633, Blast_Score=69, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]
EC number: NA
Molecular weight: Translated: 23478; Mature: 23478
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLHIWGRISSINVKKVVWTAQELGLNFQRTDAGGLFGIVKTPEYVRLNPNSTVPVIEDDD CEEEEEECCCCCHHHHEEEHHHHCCEEEECCCCCEEEEECCCCEEEECCCCCCCEEECCC FVLWESNVIVRYLCAKHSAGQMYPTDLRARFDAERWMDWQQTTLNPASRPGFWQLIRTPA EEEEECCCEEEHHHHCCCCCCCCCHHHHHHHCHHHCCCHHHHCCCCCCCCCHHHHHHCCH EQRNAAVIAESNAAVESLMATLDRHLAQRTYMAGEHFSMADIPLACEVHRWFGLPQPRQS HHCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHCCCCCCCCC RPNLERWYAGIRARQASKGVLDLALS CCCHHHHHHHHHHHCCCCCEEEEECC >Mature Secondary Structure MLHIWGRISSINVKKVVWTAQELGLNFQRTDAGGLFGIVKTPEYVRLNPNSTVPVIEDDD CEEEEEECCCCCHHHHEEEHHHHCCEEEECCCCCEEEEECCCCEEEECCCCCCCEEECCC FVLWESNVIVRYLCAKHSAGQMYPTDLRARFDAERWMDWQQTTLNPASRPGFWQLIRTPA EEEEECCCEEEHHHHCCCCCCCCCHHHHHHHCHHHCCCHHHHCCCCCCCCCHHHHHHCCH EQRNAAVIAESNAAVESLMATLDRHLAQRTYMAGEHFSMADIPLACEVHRWFGLPQPRQS HHCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHCCCCCCCCC RPNLERWYAGIRARQASKGVLDLALS CCCHHHHHHHHHHHCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]