| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is lysN [H]
Identifier: 91790078
GI number: 91790078
Start: 4466820
End: 4468040
Strand: Direct
Name: lysN [H]
Synonym: Bpro_4240
Alternate gene names: 91790078
Gene position: 4466820-4468040 (Clockwise)
Preceding gene: 91790077
Following gene: 91790079
Centisome position: 85.9
GC content: 66.01
Gene sequence:
>1221_bases ATGGAATGGACCCAAGCGCACCGCGCCCAAAAAATGAACCCCTCGGTGATCCGCGAGATTCTCAAGGTCACCGAGAAACC CGGCATCATCAGCTTTGCCGGCGGGCTGCCTTCGCCCAAGACCTTTCCGGTCGCCGCCTTTCGCGAGGCCTGCGACAAGG TGCTGCGTGAAGACGGCCATGCCGCGCTGCAGTACGCGGCCAGCGAAGGCTACGCCCCGCTGCGCGAGATGGTCGCGGCC ATGTTGCCCTGGGATGTCGATCCGGCGCAGGTGCTGATCACCACCGGCTCGCAGCAGGGCCTGGATTTGATCGCCAAAAT CCTGATCGATGCGGGCAGCCGCGTGCTGGTGGAAACGCCCACCTACCTGGGCGCGCTGCAGGCTTTCACGCCCATGGAAC CCGACATCGTCAGCGTGGCCAGCGACGACGAAGGCGTGGACCTTGCCGATCTCGAACGCAAGGCGGCCGGCGCCCGTTTC TTCTATGTGCTGCCCAATTTCCAGAACCCGACCGGCCGCACCATGACCGAAGAACGCCGTGCGGCGCTGAGCGCTGAAGC CGCGCGCCTGGGTCTGCCCATCGTGGAAGACAACCCCTATGGCGATCTCTGGTTTGACAACCCGCCGCCGCTGCCGCTGA CGGCACGCAACCCCGAGGGCTGTGTCTACCTCGGTTCGTTTTCCAAGGTGCTGGCGCCGGGGCTGCGGCTGGGCTTCATG GTGGCGCCCAAGGCGCTCTACCCCAAGCTGCTGCAGGCCAAGCAGGCCGCCGACCTGCACAGCCCGGGTTTTAACCAGCG CATGGTGGCTGAAGTCATGAAGGGCGGCTTTCTGGACCGCCATGTGCCGACCATACGGGCGCTCTACAAGTCGCAGCGCG ATGCCATGCTGGCCGCGATGCAGCGCGAAATGCCCGAAGGCGTCACCTGGAACACGCCGGCGGGTGGCATGTTCCTGTGG GCGCGCCTGCCCCAGGGCATGAATGCGGTGGACCTGTTGCCCCATGCCGTGGAGCGGGGTGTGGCCTTCGTACCCGGCGC TGCGTTTTATGCGGACACGGCGGACGCGCGTACCCTGCGCCTGTCGTTTGTCACGGCAAGCGTGGAGCAGATCAATATCG GCATCGCCGCACTGGCCGCCGCGATTCGCGAGCTGCAGGCACCTGCCGCGCCGGCGGCTTCACAGGCCGCGACGAATCAG GCACTGGCAGCCAGCCTTTAA
Upstream 100 bases:
>100_bases GCGTGCCTGCCGGCCGCCGGTGCGCCGCACCATGCTGACAACTTTGCAGAAGATTTTTTGACCAGGGCTGTCTTTTACGG CCCGCAAGGAGGAGAGTGAA
Downstream 100 bases:
>100_bases ACCGTCCAAAATTCGTCAACACTTCAGGAAAGACATCCAGCATGCTGCATATCTGGGGACGCATCAGCTCCATCAATGTC AAGAAAGTCGTCTGGACCGC
Product: class I/II aminotransferase
Products: NA
Alternate protein names: 2-aminoadipate aminotransferase; Alpha-aminoadipate aminotransferase; AAA-AT; AadAT [H]
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MEWTQAHRAQKMNPSVIREILKVTEKPGIISFAGGLPSPKTFPVAAFREACDKVLREDGHAALQYAASEGYAPLREMVAA MLPWDVDPAQVLITTGSQQGLDLIAKILIDAGSRVLVETPTYLGALQAFTPMEPDIVSVASDDEGVDLADLERKAAGARF FYVLPNFQNPTGRTMTEERRAALSAEAARLGLPIVEDNPYGDLWFDNPPPLPLTARNPEGCVYLGSFSKVLAPGLRLGFM VAPKALYPKLLQAKQAADLHSPGFNQRMVAEVMKGGFLDRHVPTIRALYKSQRDAMLAAMQREMPEGVTWNTPAGGMFLW ARLPQGMNAVDLLPHAVERGVAFVPGAAFYADTADARTLRLSFVTASVEQINIGIAALAAAIRELQAPAAPAASQAATNQ ALAASL
Sequences:
>Translated_406_residues MEWTQAHRAQKMNPSVIREILKVTEKPGIISFAGGLPSPKTFPVAAFREACDKVLREDGHAALQYAASEGYAPLREMVAA MLPWDVDPAQVLITTGSQQGLDLIAKILIDAGSRVLVETPTYLGALQAFTPMEPDIVSVASDDEGVDLADLERKAAGARF FYVLPNFQNPTGRTMTEERRAALSAEAARLGLPIVEDNPYGDLWFDNPPPLPLTARNPEGCVYLGSFSKVLAPGLRLGFM VAPKALYPKLLQAKQAADLHSPGFNQRMVAEVMKGGFLDRHVPTIRALYKSQRDAMLAAMQREMPEGVTWNTPAGGMFLW ARLPQGMNAVDLLPHAVERGVAFVPGAAFYADTADARTLRLSFVTASVEQINIGIAALAAAIRELQAPAAPAASQAATNQ ALAASL >Mature_406_residues MEWTQAHRAQKMNPSVIREILKVTEKPGIISFAGGLPSPKTFPVAAFREACDKVLREDGHAALQYAASEGYAPLREMVAA MLPWDVDPAQVLITTGSQQGLDLIAKILIDAGSRVLVETPTYLGALQAFTPMEPDIVSVASDDEGVDLADLERKAAGARF FYVLPNFQNPTGRTMTEERRAALSAEAARLGLPIVEDNPYGDLWFDNPPPLPLTARNPEGCVYLGSFSKVLAPGLRLGFM VAPKALYPKLLQAKQAADLHSPGFNQRMVAEVMKGGFLDRHVPTIRALYKSQRDAMLAAMQREMPEGVTWNTPAGGMFLW ARLPQGMNAVDLLPHAVERGVAFVPGAAFYADTADARTLRLSFVTASVEQINIGIAALAAAIRELQAPAAPAASQAATNQ ALAASL
Specific function: Catalyzes the transfer of an amino group between 2- oxoadipate (2-OA) and glutamate (Glu) to yield alpha-aminodipate (AAA). It can also transaminate glutamate, leucine, and aromatic amino acids. It also conbtributes in the biosynthesis of other amino acid
COG id: COG1167
COG function: function code KE; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI7705897, Length=416, Percent_Identity=33.1730769230769, Blast_Score=203, Evalue=3e-52, Organism=Homo sapiens, GI33469970, Length=416, Percent_Identity=33.1730769230769, Blast_Score=203, Evalue=3e-52, Organism=Escherichia coli, GI1787710, Length=377, Percent_Identity=26.790450928382, Blast_Score=147, Evalue=1e-36, Organism=Escherichia coli, GI1790797, Length=353, Percent_Identity=24.929178470255, Blast_Score=119, Evalue=3e-28, Organism=Escherichia coli, GI48994949, Length=394, Percent_Identity=26.6497461928934, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1788722, Length=346, Percent_Identity=28.0346820809249, Blast_Score=73, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6321000, Length=429, Percent_Identity=23.0769230769231, Blast_Score=82, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6321929, Length=423, Percent_Identity=23.6406619385343, Blast_Score=80, Evalue=7e-16, Organism=Drosophila melanogaster, GI21356535, Length=396, Percent_Identity=28.030303030303, Blast_Score=134, Evalue=1e-31,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004839 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.39 [H]
Molecular weight: Translated: 43658; Mature: 43658
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEWTQAHRAQKMNPSVIREILKVTEKPGIISFAGGLPSPKTFPVAAFREACDKVLREDGH CCCHHHHHHHCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCH AALQYAASEGYAPLREMVAAMLPWDVDPAQVLITTGSQQGLDLIAKILIDAGSRVLVETP HHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEECC TYLGALQAFTPMEPDIVSVASDDEGVDLADLERKAAGARFFYVLPNFQNPTGRTMTEERR HHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHH AALSAEAARLGLPIVEDNPYGDLWFDNPPPLPLTARNPEGCVYLGSFSKVLAPGLRLGFM HHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCEECCCCCCEEEECCCHHHHCCCHHHHHE VAPKALYPKLLQAKQAADLHSPGFNQRMVAEVMKGGFLDRHVPTIRALYKSQRDAMLAAM ECCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH QREMPEGVTWNTPAGGMFLWARLPQGMNAVDLLPHAVERGVAFVPGAAFYADTADARTLR HHHCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCEECCCCHHCCCCCCCEEEE LSFVTASVEQINIGIAALAAAIRELQAPAAPAASQAATNQALAASL EEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MEWTQAHRAQKMNPSVIREILKVTEKPGIISFAGGLPSPKTFPVAAFREACDKVLREDGH CCCHHHHHHHCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCH AALQYAASEGYAPLREMVAAMLPWDVDPAQVLITTGSQQGLDLIAKILIDAGSRVLVETP HHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEECC TYLGALQAFTPMEPDIVSVASDDEGVDLADLERKAAGARFFYVLPNFQNPTGRTMTEERR HHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHH AALSAEAARLGLPIVEDNPYGDLWFDNPPPLPLTARNPEGCVYLGSFSKVLAPGLRLGFM HHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCEECCCCCCEEEECCCHHHHCCCHHHHHE VAPKALYPKLLQAKQAADLHSPGFNQRMVAEVMKGGFLDRHVPTIRALYKSQRDAMLAAM ECCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH QREMPEGVTWNTPAGGMFLWARLPQGMNAVDLLPHAVERGVAFVPGAAFYADTADARTLR HHHCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCEECCCCHHCCCCCCCEEEE LSFVTASVEQINIGIAALAAAIRELQAPAAPAASQAATNQALAASL EEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA