| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91790069
Identifier: 91790069
GI number: 91790069
Start: 4460908
End: 4461273
Strand: Reverse
Name: 91790069
Synonym: Bpro_4231
Alternate gene names: NA
Gene position: 4461273-4460908 (Counterclockwise)
Preceding gene: 91790070
Following gene: 91790066
Centisome position: 85.79
GC content: 62.84
Gene sequence:
>366_bases ATGTCGACCACTCTCAATTTCCGGTGCCTTTACACCGACGACGACGGTGTCTCGCACTTTGCGCCGCTTGACGTCGAGAT GGCGCCGCGCGAGTTCGCGCCGCCGTTCAGCGTTTCGCCCCTGGAAACAGCGTCACGCTATGGATTCCTGCACTTGCCCG CGGGATGGATCGGAGACTTGCATCCCTCGCCCCTGCGCATGTGGATCATCGTGCTGTCGGGGGAAATGGAGTTCGAGGCA GGCGACGGTGAGCAGCAAAAAATTGCGCCCGGCAGTGCGTTGCTGCTGGAAGACACCACCGGCATGGGTCATTGCAGCCG CGTGCTCGGCAACCAGCCGGCCGTCCTCGCGGTCGTGCATGTCTAG
Upstream 100 bases:
>100_bases AGCGGCATCAACTGGAATGAAGCCTGCATGGAACGCTACCTGGTGCAGTGAACGAAATTCAAGGCGAAGTTAAGGCGTTA AGCGGCAAAGGAGGTAAAAC
Downstream 100 bases:
>100_bases GAACCTGCCGGGCTTGGGGGTCGAAAGCGAAAACCGGCCCCAGCCGAATTCATCAAAAAACGGCGCACTTCGGTTCTTCA ACGGTTCTTCAGAGCATCTC
Product: cupin 2 barrel-domain containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MSTTLNFRCLYTDDDGVSHFAPLDVEMAPREFAPPFSVSPLETASRYGFLHLPAGWIGDLHPSPLRMWIIVLSGEMEFEA GDGEQQKIAPGSALLLEDTTGMGHCSRVLGNQPAVLAVVHV
Sequences:
>Translated_121_residues MSTTLNFRCLYTDDDGVSHFAPLDVEMAPREFAPPFSVSPLETASRYGFLHLPAGWIGDLHPSPLRMWIIVLSGEMEFEA GDGEQQKIAPGSALLLEDTTGMGHCSRVLGNQPAVLAVVHV >Mature_120_residues STTLNFRCLYTDDDGVSHFAPLDVEMAPREFAPPFSVSPLETASRYGFLHLPAGWIGDLHPSPLRMWIIVLSGEMEFEAG DGEQQKIAPGSALLLEDTTGMGHCSRVLGNQPAVLAVVHV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13137; Mature: 13006
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTLNFRCLYTDDDGVSHFAPLDVEMAPREFAPPFSVSPLETASRYGFLHLPAGWIGDL CCCEEEEEEEEECCCCCCEECCCCCEECCHHCCCCCCCCCCCHHHHCCEEECCCCCCCCC HPSPLRMWIIVLSGEMEFEAGDGEQQKIAPGSALLLEDTTGMGHCSRVLGNQPAVLAVVH CCCCEEEEEEEECCCEEEECCCCCCEEECCCCEEEEECCCCCCHHHHHHCCCCEEEEEEE V C >Mature Secondary Structure STTLNFRCLYTDDDGVSHFAPLDVEMAPREFAPPFSVSPLETASRYGFLHLPAGWIGDL CCEEEEEEEEECCCCCCEECCCCCEECCHHCCCCCCCCCCCHHHHCCEEECCCCCCCCC HPSPLRMWIIVLSGEMEFEAGDGEQQKIAPGSALLLEDTTGMGHCSRVLGNQPAVLAVVH CCCCEEEEEEEECCCEEEECCCCCCEEECCCCEEEEECCCCCCHHHHHHCCCCEEEEEEE V C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA