| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is iorA [H]
Identifier: 91790066
GI number: 91790066
Start: 4456373
End: 4456864
Strand: Reverse
Name: iorA [H]
Synonym: Bpro_4228
Alternate gene names: 91790066
Gene position: 4456864-4456373 (Counterclockwise)
Preceding gene: 91790069
Following gene: 91790065
Centisome position: 85.7
GC content: 65.85
Gene sequence:
>492_bases GTGGAGTTACCGATCAAGCTGGACCTCAACGGCCGCGCTGTGCAGCTCGATGCCGACCCCGGCATGCCACTGCTCTGGCT GCTGCGGGATGTGCTGAACCTGACCGGTACCAAGTTTGGCTGCGGCGTGGCGGCCTGCGGTGCCTGCACCGTGCGGGTGG ATGGCCAGGCCGTGCGGTCCTGTATGACGCCTGTGTCGGCCGTGCTGGGCAAACGCGTGCAAACCATTGAAGCCCTGGGC ACGCCCGACAAACCCCATGCCCTGCAACTGGCCTGGATCGCCGAGCAGGTGCCCCAGTGCGGTTATTGCCAGTCGGGCAT GCTGATGGCAGCAGCCGCCCTGCTCGACAGGAAGCCCAAACCCACCGATGCCGACATTGACGCGGCCATGACCAATATCT GCCGCTGCGGTACGTACCAGAGGATCCGGGCGGCCATCAAGCGGGCGGCGGGCATCGCGGCCAATGGTGGCTTGAAAAAG GCCGGCCCATGA
Upstream 100 bases:
>100_bases CGATTTGTCGGGGCTTCCCGGGCTTTGGTGGGCGAGGGCTGGCCACCGCATCGTCGCGTTATAGTGGTCCTGTCCTTGAT GGACTTTCAGGAGACGCCGC
Downstream 100 bases:
>100_bases AAAGACGCGCCTGGCTGCTGAGTGCGGCAGGGGCTGCGGGCGCGCTGGTCATCGGCTGGAGCGTGTTGCCACCGCGTTCC CGGCTGGGCAGCGCCGGCTC
Product: (2Fe-2S)-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MELPIKLDLNGRAVQLDADPGMPLLWLLRDVLNLTGTKFGCGVAACGACTVRVDGQAVRSCMTPVSAVLGKRVQTIEALG TPDKPHALQLAWIAEQVPQCGYCQSGMLMAAAALLDRKPKPTDADIDAAMTNICRCGTYQRIRAAIKRAAGIAANGGLKK AGP
Sequences:
>Translated_163_residues MELPIKLDLNGRAVQLDADPGMPLLWLLRDVLNLTGTKFGCGVAACGACTVRVDGQAVRSCMTPVSAVLGKRVQTIEALG TPDKPHALQLAWIAEQVPQCGYCQSGMLMAAAALLDRKPKPTDADIDAAMTNICRCGTYQRIRAAIKRAAGIAANGGLKK AGP >Mature_163_residues MELPIKLDLNGRAVQLDADPGMPLLWLLRDVLNLTGTKFGCGVAACGACTVRVDGQAVRSCMTPVSAVLGKRVQTIEALG TPDKPHALQLAWIAEQVPQCGYCQSGMLMAAAALLDRKPKPTDADIDAAMTNICRCGTYQRIRAAIKRAAGIAANGGLKK AGP
Specific function: Specific towards N-containing N-heterocyclic substrates, including isoquinoline, isoquinolin-5-ol, phthalazine and quinazoline [H]
COG id: COG2080
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]
Homologues:
Organism=Homo sapiens, GI91823271, Length=147, Percent_Identity=37.4149659863946, Blast_Score=69, Evalue=2e-12, Organism=Homo sapiens, GI71773480, Length=152, Percent_Identity=35.5263157894737, Blast_Score=64, Evalue=8e-11, Organism=Escherichia coli, GI1786480, Length=165, Percent_Identity=40.6060606060606, Blast_Score=118, Evalue=2e-28, Organism=Escherichia coli, GI1789232, Length=143, Percent_Identity=39.8601398601399, Blast_Score=92, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17540638, Length=163, Percent_Identity=39.2638036809816, Blast_Score=108, Evalue=9e-25, Organism=Caenorhabditis elegans, GI32566215, Length=154, Percent_Identity=37.6623376623377, Blast_Score=100, Evalue=4e-22, Organism=Caenorhabditis elegans, GI17539860, Length=154, Percent_Identity=36.3636363636364, Blast_Score=99, Evalue=7e-22, Organism=Drosophila melanogaster, GI17737937, Length=152, Percent_Identity=37.5, Blast_Score=94, Evalue=4e-20, Organism=Drosophila melanogaster, GI24647193, Length=161, Percent_Identity=34.7826086956522, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI24647197, Length=164, Percent_Identity=31.0975609756098, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI24647195, Length=164, Percent_Identity=31.0975609756098, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI24647199, Length=160, Percent_Identity=34.375, Blast_Score=64, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002888 - InterPro: IPR006058 - InterPro: IPR012675 - InterPro: IPR001041 [H]
Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]
EC number: =1.3.99.16 [H]
Molecular weight: Translated: 17114; Mature: 17114
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 8.6 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 8.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELPIKLDLNGRAVQLDADPGMPLLWLLRDVLNLTGTKFGCGVAACGACTVRVDGQAVRS CCCCEEECCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCHHHCCEEEEEECHHHHHH CMTPVSAVLGKRVQTIEALGTPDKPHALQLAWIAEQVPQCGYCQSGMLMAAAALLDRKPK HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCC PTDADIDAAMTNICRCGTYQRIRAAIKRAAGIAANGGLKKAGP CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MELPIKLDLNGRAVQLDADPGMPLLWLLRDVLNLTGTKFGCGVAACGACTVRVDGQAVRS CCCCEEECCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCHHHCCEEEEEECHHHHHH CMTPVSAVLGKRVQTIEALGTPDKPHALQLAWIAEQVPQCGYCQSGMLMAAAALLDRKPK HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCC PTDADIDAAMTNICRCGTYQRIRAAIKRAAGIAANGGLKKAGP CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7782304; 8157655 [H]