| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is cya3 [H]
Identifier: 91790054
GI number: 91790054
Start: 4434689
End: 4436512
Strand: Direct
Name: cya3 [H]
Synonym: Bpro_4216
Alternate gene names: 91790054
Gene position: 4434689-4436512 (Clockwise)
Preceding gene: 91790053
Following gene: 91790055
Centisome position: 85.28
GC content: 60.09
Gene sequence:
>1824_bases ATGAGGAGGCGAATAATTGTTACACCGCTTACGATGTCTTCCTCACTGATTGAACTCCCCCATTTCATGCATCGCAGCAC CAAGGTGCTGCTGGTGATGGATGTGGTGGAGTCGGTCAGGCTCATGGAGCAGGACGAACATGACTTTGTACAGCGGTGGC AACAACTGGTGCAGCAGGCGGAGCAGCAAATTTTGCCGCTGCATGGCGGGCGCATTGTCAAAAGCCTGGGTGATGGCCTG ATGCTGGAGTTTGCCAATGCGCAAAGTGGCGTCAGGGCGGCCTTCGCCCTGCAGCAGTTCAGCCAGCAGGCCAACGCCGG CCTGCGCCCTGAGCAGCAGATGCACCTGCGCATGGGTGGGCACTTAGCCAGCTTTGTGACCGACCAGCACGATATCTACG GCACAGATGTGAACCTGACGGCGCGGTTTTGCACCCTGGCCGGGCCCAGCGAGATCGTGGTTTCTGCCGAGCTTCGCGAT CAACTCGTTCCCGTGCTCGATGCTGACATTGAGGACATGGGGGAGTGCTACCTCAAGCATGTAGAAAAGCCCATCCACAC CTATCGCGTGGCACCGCCAGGCAAGGCGCCAACATTCGTCACCTTGCCAACCGACGACACCGAGCTGCGCCCCACGATTG CCGTGATTCCGTTCACCGCCCGCACCTCGGACCCCGACCACGCGGTGCTGGGTGAAATACTGGCTGAAGAAATCATTGCG GCCCTGTCGCGCACGCCGGACCTGAACGTCATTTCGCGTTTGTCGACCAGCGCCTTGCGCGGCCGTGACGCCAGTCTGCC CGAGGTGCAAAACCACCTGCATGCCAGCTATGTGCTGTCGGGCGCCTATCGGGTGTTGGGCCAACAGCTGATTCTGGTGA CCGAACTGATTGAAGCGCGCACCGGCCGGGCCGTGTGGGGCGACAGCCTGAAGAGCACGGTGCAGGAAGTGTTGCATGGC GAAGACCGGATCACCGCAGAAGTGGTGTCGCAGTTGGGAGCCCAAATCGTGCGGACTGAAATGCAGCGCGCGGCCAGTCG CCCCTTGCCCAACCTGGAAAGCTCCACGCTGTTGATGGGTGCGATTTCCCTGATGCACCGCTCCACCCGCAGCGAGTTTG ACCGTGTGCGCGAGATGCTCGAGTACCTGATTGAGCGGCATCGCCGACTGCCTACACCCCGAGCCTGGCTGGCGAAATGG CACGTGCTACAGGTCACACGCGGGCTATCTTCAGGTGGCAAGGACGAAACCAAACGGGCGCTGGAGCAGACCCAGCGGGC GCTGGACGTCGACCCAGGCTGCTCGTTGGCGTTGGCCATTGAAGGATTCGTGCATTGCCACATGCTGAAGGATCTCGATG GTGCCGCGCAGCGCTATGAGTCGGCGCTGGCGGCCAATCCGAACGATTCGCTGGCGTGGCTATTTTCTGGTGTATTGCAT TCGTTTAGAGACGAAGGAGTCAAAGCGCTCGCAGCCAGCGACAGAGCCTTGAACCTGTCACCGCTCGATCCCATGCTGTA CTTCTATCAGTCGCTAGCGGCCTCTGCAGCGCTCTCGGCCGGAGACTACAAGCGCGTGATCGAGCTAGCTACGGCGTCCC TGCGCTCCAACAGAGGGCATACATCCACCTATCGGGTATTGGCCGTCGCGCAAACTCTGGATGGCAATTTGGACGAGGCG AGAGCCACCGTCAAATCGCTGATGCTGCTGGAGCCAAACTTTACCGTGCAAAACTTTCTTCAACGTTCACCCAGCAGCAA CTATGCGATAGGCCAGCTGTGCGCACAGGCGTTGCGGGATGCCGGCGTTCCGGAACAAATTTAA
Upstream 100 bases:
>100_bases CGGAAGATGCGGTAATTCAGCGCTGAAAAACAACAGTGTGTGGCGCTCTGGAGGCGCAGCCACCCATTCAATGTTTCGTT AGAGCGGTTCCTCCTCCAAA
Downstream 100 bases:
>100_bases ATCAACACAAAAGGAAAAACAAATGAGTCAACTAGGCGGGTTCGGGGGATTTGGCGGCTTTGGAGGGTTTGGTGGCTTCG GAGGGTTCGGGGGATTTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: ATP pyrophosphate-lyase 3; Adenylyl cyclase 3 [H]
Number of amino acids: Translated: 607; Mature: 607
Protein sequence:
>607_residues MRRRIIVTPLTMSSSLIELPHFMHRSTKVLLVMDVVESVRLMEQDEHDFVQRWQQLVQQAEQQILPLHGGRIVKSLGDGL MLEFANAQSGVRAAFALQQFSQQANAGLRPEQQMHLRMGGHLASFVTDQHDIYGTDVNLTARFCTLAGPSEIVVSAELRD QLVPVLDADIEDMGECYLKHVEKPIHTYRVAPPGKAPTFVTLPTDDTELRPTIAVIPFTARTSDPDHAVLGEILAEEIIA ALSRTPDLNVISRLSTSALRGRDASLPEVQNHLHASYVLSGAYRVLGQQLILVTELIEARTGRAVWGDSLKSTVQEVLHG EDRITAEVVSQLGAQIVRTEMQRAASRPLPNLESSTLLMGAISLMHRSTRSEFDRVREMLEYLIERHRRLPTPRAWLAKW HVLQVTRGLSSGGKDETKRALEQTQRALDVDPGCSLALAIEGFVHCHMLKDLDGAAQRYESALAANPNDSLAWLFSGVLH SFRDEGVKALAASDRALNLSPLDPMLYFYQSLAASAALSAGDYKRVIELATASLRSNRGHTSTYRVLAVAQTLDGNLDEA RATVKSLMLLEPNFTVQNFLQRSPSSNYAIGQLCAQALRDAGVPEQI
Sequences:
>Translated_607_residues MRRRIIVTPLTMSSSLIELPHFMHRSTKVLLVMDVVESVRLMEQDEHDFVQRWQQLVQQAEQQILPLHGGRIVKSLGDGL MLEFANAQSGVRAAFALQQFSQQANAGLRPEQQMHLRMGGHLASFVTDQHDIYGTDVNLTARFCTLAGPSEIVVSAELRD QLVPVLDADIEDMGECYLKHVEKPIHTYRVAPPGKAPTFVTLPTDDTELRPTIAVIPFTARTSDPDHAVLGEILAEEIIA ALSRTPDLNVISRLSTSALRGRDASLPEVQNHLHASYVLSGAYRVLGQQLILVTELIEARTGRAVWGDSLKSTVQEVLHG EDRITAEVVSQLGAQIVRTEMQRAASRPLPNLESSTLLMGAISLMHRSTRSEFDRVREMLEYLIERHRRLPTPRAWLAKW HVLQVTRGLSSGGKDETKRALEQTQRALDVDPGCSLALAIEGFVHCHMLKDLDGAAQRYESALAANPNDSLAWLFSGVLH SFRDEGVKALAASDRALNLSPLDPMLYFYQSLAASAALSAGDYKRVIELATASLRSNRGHTSTYRVLAVAQTLDGNLDEA RATVKSLMLLEPNFTVQNFLQRSPSSNYAIGQLCAQALRDAGVPEQI >Mature_607_residues MRRRIIVTPLTMSSSLIELPHFMHRSTKVLLVMDVVESVRLMEQDEHDFVQRWQQLVQQAEQQILPLHGGRIVKSLGDGL MLEFANAQSGVRAAFALQQFSQQANAGLRPEQQMHLRMGGHLASFVTDQHDIYGTDVNLTARFCTLAGPSEIVVSAELRD QLVPVLDADIEDMGECYLKHVEKPIHTYRVAPPGKAPTFVTLPTDDTELRPTIAVIPFTARTSDPDHAVLGEILAEEIIA ALSRTPDLNVISRLSTSALRGRDASLPEVQNHLHASYVLSGAYRVLGQQLILVTELIEARTGRAVWGDSLKSTVQEVLHG EDRITAEVVSQLGAQIVRTEMQRAASRPLPNLESSTLLMGAISLMHRSTRSEFDRVREMLEYLIERHRRLPTPRAWLAKW HVLQVTRGLSSGGKDETKRALEQTQRALDVDPGCSLALAIEGFVHCHMLKDLDGAAQRYESALAANPNDSLAWLFSGVLH SFRDEGVKALAASDRALNLSPLDPMLYFYQSLAASAALSAGDYKRVIELATASLRSNRGHTSTYRVLAVAQTLDGNLDEA RATVKSLMLLEPNFTVQNFLQRSPSSNYAIGQLCAQALRDAGVPEQI
Specific function: Unknown
COG id: COG5616
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 5 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR001440 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF00211 Guanylate_cyc; PF00515 TPR_1 [H]
EC number: =4.6.1.1 [H]
Molecular weight: Translated: 67085; Mature: 67085
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS50293 TPR_REGION ; PS50125 GUANYLATE_CYCLASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRRIIVTPLTMSSSLIELPHFMHRSTKVLLVMDVVESVRLMEQDEHDFVQRWQQLVQQA CCCCEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH EQQILPLHGGRIVKSLGDGLMLEFANAQSGVRAAFALQQFSQQANAGLRPEQQMHLRMGG HHHHCCCCCCHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC HLASFVTDQHDIYGTDVNLTARFCTLAGPSEIVVSAELRDQLVPVLDADIEDMGECYLKH HHHHHHCCCCCEECCCCEEHHHEEECCCCCCEEEEHHHHHHHHHHHCCCHHHHHHHHHHH VEKPIHTYRVAPPGKAPTFVTLPTDDTELRPTIAVIPFTARTSDPDHAVLGEILAEEIIA HHCHHHHEECCCCCCCCEEEECCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHH ALSRTPDLNVISRLSTSALRGRDASLPEVQNHLHASYVLSGAYRVLGQQLILVTELIEAR HHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TGRAVWGDSLKSTVQEVLHGEDRITAEVVSQLGAQIVRTEMQRAASRPLPNLESSTLLMG CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH AISLMHRSTRSEFDRVREMLEYLIERHRRLPTPRAWLAKWHVLQVTRGLSSGGKDETKRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHH LEQTQRALDVDPGCSLALAIEGFVHCHMLKDLDGAAQRYESALAANPNDSLAWLFSGVLH HHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHH SFRDEGVKALAASDRALNLSPLDPMLYFYQSLAASAALSAGDYKRVIELATASLRSNRGH HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC TSTYRVLAVAQTLDGNLDEARATVKSLMLLEPNFTVQNFLQRSPSSNYAIGQLCAQALRD CHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHH AGVPEQI CCCCCCC >Mature Secondary Structure MRRRIIVTPLTMSSSLIELPHFMHRSTKVLLVMDVVESVRLMEQDEHDFVQRWQQLVQQA CCCCEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH EQQILPLHGGRIVKSLGDGLMLEFANAQSGVRAAFALQQFSQQANAGLRPEQQMHLRMGG HHHHCCCCCCHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC HLASFVTDQHDIYGTDVNLTARFCTLAGPSEIVVSAELRDQLVPVLDADIEDMGECYLKH HHHHHHCCCCCEECCCCEEHHHEEECCCCCCEEEEHHHHHHHHHHHCCCHHHHHHHHHHH VEKPIHTYRVAPPGKAPTFVTLPTDDTELRPTIAVIPFTARTSDPDHAVLGEILAEEIIA HHCHHHHEECCCCCCCCEEEECCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHH ALSRTPDLNVISRLSTSALRGRDASLPEVQNHLHASYVLSGAYRVLGQQLILVTELIEAR HHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TGRAVWGDSLKSTVQEVLHGEDRITAEVVSQLGAQIVRTEMQRAASRPLPNLESSTLLMG CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH AISLMHRSTRSEFDRVREMLEYLIERHRRLPTPRAWLAKWHVLQVTRGLSSGGKDETKRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHH LEQTQRALDVDPGCSLALAIEGFVHCHMLKDLDGAAQRYESALAANPNDSLAWLFSGVLH HHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHH SFRDEGVKALAASDRALNLSPLDPMLYFYQSLAASAALSAGDYKRVIELATASLRSNRGH HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC TSTYRVLAVAQTLDGNLDEARATVKSLMLLEPNFTVQNFLQRSPSSNYAIGQLCAQALRD CHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHH AGVPEQI CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10485295; 11481432 [H]