Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is lnt [H]

Identifier: 91790046

GI number: 91790046

Start: 4426853

End: 4428499

Strand: Reverse

Name: lnt [H]

Synonym: Bpro_4208

Alternate gene names: 91790046

Gene position: 4428499-4426853 (Counterclockwise)

Preceding gene: 91790047

Following gene: 91790044

Centisome position: 85.16

GC content: 66.12

Gene sequence:

>1647_bases
ATGGAGCCGAGTTCAATCCAAAGCATGATGTCTGCGCTGCCGACCTTGCCGGCGCTGCTGCAACACTTCGGTCAGACACC
AACGCGCAGTCGCCTGTCGTGGCTCCAGTTCGTGATTGTTCTGGTCGCCGGCAGTGCTCATGCGGCCAGCCTCGCATGGC
CGTTTCCCTTTGTCTTTGCGCAAGGCCAGCCCTTGTGGGGCCTGCAATTGCTGGCGCTGACGCTGCTGGCAGCGCAACTC
GATGGCTGCCGGTCCTGGGGGCGCACCGCCTGGCTGGGCGGGACATTTTCCGCTGCCATGCTGTGCGGCACGTTCTGGTG
GCTGTTCATCTCCATGCATGACTACGGCGGCCTGGCTGCGCCGCTGACGGTGCTGGCCATTGTGCTGCTGGCGGTGTTTC
TGGGGCTGTACTATGCCGCCGCCGCTGCCTTGTTTGTCGTGCTGGCCCCCGCTCAGCGGGCGCAACGTGCATTGGTTTTT
GCCGCGCTCTGGCTGCTGGCCGAGCTGGCCCGCGTGAAGCTGTTCACCGGCTTTCCCTGGGGAGAAGGCGGCTATGCCCA
TGTGGACGGCTGGGCCAGGCCGCTGGCGGCGTGGGTCGGTGTGCACGGGCTGACCTTTCTGGCCGCGCTGGTGGCGGCCT
CGCTGGCCGTGTGCCTGCGCGCGCGCAAGACCCGCTGGCTGGCAGCGATCAGCCTGGTTTTTGTCAGTGTGGCGGTGGCC
TGGCTGCCGGCGACGGACGTAGCCTACGGCCAGGACCAGCCTCCCCTGCTGCCGGTGACGCTGCTGCAGGGCAACATTCC
CCAGAACGAAAAATTCCAGCCGGGCACCGGTGTGGTCACGTCGCTGCGCTGGTACGGCGAGCAGTTGCGTGATGCGAAGA
CCGCGCTGGTGGTCGCGCCTGAAACCGCCATTCCCCTGCTGCCGCAGCAACTGCCCCCTGGCTACTGGCAGGCCGTGCAG
GGGCGTTTTGCCGTGGGTGAACAGGCCGCGCTGATAGGCATGCCGCTGGGCAATACCCAGACGGGTTACGCCAACTCGGT
GCTGGGGCTCAAGCCGGCTTCATCAACGGGTTCATCGCCCAATCCCGCCCAGCCCTACCGGTATGACAAGCATCACCTGG
TGCCGTTTGGCGAATTCATTCCACCGGGGTTCCGGTGGTTCACCAACATGATGAACATCCCGCTGGGTGACTTCAACCGC
GGCACGGTGGTGCAGGCTTCCTTCGACTGGAAGGGCCAGCGGCTGGCTCCCAACATCTGCTACGAAGACCTGTTTGGCGA
GGAGCTGGGCGCGCGCTTTACCGATCCGGCGCTGGCGCCCACCATGTTTGTCAACCTCAGCAACATTGCCTGGTTTGGCA
ACACCGTGGCGATTGACCAGCACCTGCAGATCTCGCGCATGCGGGCACTGGAGTTCAGCCGGCCCATGCTTCGGGCCACC
AACACCGGCGCCACCGCCATCATTGACCACCGCGGTCAGGTGACGCATGCGCTGCCGCGCCACACACGCGGTGCGCTGGT
TGGCGAAGTGCAGGGGCGCAGCGGCATCACGCCCTATGCCTGGTGGGTGTCGCGCTATGGCCTGTGGCCGCTGTGGGCGC
TGGGCCTGGGGATTGCGGGGCTGGCGCTGGTGCTGCGCCGCCGCTGA

Upstream 100 bases:

>100_bases
TGCAATTCACGGTGCTGCACACCAAGGGTGGAGCCGTGCGCTGGTTCAAGGTGTCGCCTGTTGTGGCCAGGGCCTGAGCC
CTCTGAAAAGAAAGGGACCG

Downstream 100 bases:

>100_bases
GCCCTTCTCGCGATACGCGATATCCGGCCTGCTCAATGGCTGGACGCCATCACCCCGCGCAGCAAGTCTGGCAGCATGCC
CAGCAGGCGCAAGGCGTCCT

Product: apolipoprotein N-acyltransferase

Products: NA

Alternate protein names: ALP N-acyltransferase [H]

Number of amino acids: Translated: 548; Mature: 548

Protein sequence:

>548_residues
MEPSSIQSMMSALPTLPALLQHFGQTPTRSRLSWLQFVIVLVAGSAHAASLAWPFPFVFAQGQPLWGLQLLALTLLAAQL
DGCRSWGRTAWLGGTFSAAMLCGTFWWLFISMHDYGGLAAPLTVLAIVLLAVFLGLYYAAAAALFVVLAPAQRAQRALVF
AALWLLAELARVKLFTGFPWGEGGYAHVDGWARPLAAWVGVHGLTFLAALVAASLAVCLRARKTRWLAAISLVFVSVAVA
WLPATDVAYGQDQPPLLPVTLLQGNIPQNEKFQPGTGVVTSLRWYGEQLRDAKTALVVAPETAIPLLPQQLPPGYWQAVQ
GRFAVGEQAALIGMPLGNTQTGYANSVLGLKPASSTGSSPNPAQPYRYDKHHLVPFGEFIPPGFRWFTNMMNIPLGDFNR
GTVVQASFDWKGQRLAPNICYEDLFGEELGARFTDPALAPTMFVNLSNIAWFGNTVAIDQHLQISRMRALEFSRPMLRAT
NTGATAIIDHRGQVTHALPRHTRGALVGEVQGRSGITPYAWWVSRYGLWPLWALGLGIAGLALVLRRR

Sequences:

>Translated_548_residues
MEPSSIQSMMSALPTLPALLQHFGQTPTRSRLSWLQFVIVLVAGSAHAASLAWPFPFVFAQGQPLWGLQLLALTLLAAQL
DGCRSWGRTAWLGGTFSAAMLCGTFWWLFISMHDYGGLAAPLTVLAIVLLAVFLGLYYAAAAALFVVLAPAQRAQRALVF
AALWLLAELARVKLFTGFPWGEGGYAHVDGWARPLAAWVGVHGLTFLAALVAASLAVCLRARKTRWLAAISLVFVSVAVA
WLPATDVAYGQDQPPLLPVTLLQGNIPQNEKFQPGTGVVTSLRWYGEQLRDAKTALVVAPETAIPLLPQQLPPGYWQAVQ
GRFAVGEQAALIGMPLGNTQTGYANSVLGLKPASSTGSSPNPAQPYRYDKHHLVPFGEFIPPGFRWFTNMMNIPLGDFNR
GTVVQASFDWKGQRLAPNICYEDLFGEELGARFTDPALAPTMFVNLSNIAWFGNTVAIDQHLQISRMRALEFSRPMLRAT
NTGATAIIDHRGQVTHALPRHTRGALVGEVQGRSGITPYAWWVSRYGLWPLWALGLGIAGLALVLRRR
>Mature_548_residues
MEPSSIQSMMSALPTLPALLQHFGQTPTRSRLSWLQFVIVLVAGSAHAASLAWPFPFVFAQGQPLWGLQLLALTLLAAQL
DGCRSWGRTAWLGGTFSAAMLCGTFWWLFISMHDYGGLAAPLTVLAIVLLAVFLGLYYAAAAALFVVLAPAQRAQRALVF
AALWLLAELARVKLFTGFPWGEGGYAHVDGWARPLAAWVGVHGLTFLAALVAASLAVCLRARKTRWLAAISLVFVSVAVA
WLPATDVAYGQDQPPLLPVTLLQGNIPQNEKFQPGTGVVTSLRWYGEQLRDAKTALVVAPETAIPLLPQQLPPGYWQAVQ
GRFAVGEQAALIGMPLGNTQTGYANSVLGLKPASSTGSSPNPAQPYRYDKHHLVPFGEFIPPGFRWFTNMMNIPLGDFNR
GTVVQASFDWKGQRLAPNICYEDLFGEELGARFTDPALAPTMFVNLSNIAWFGNTVAIDQHLQISRMRALEFSRPMLRAT
NTGATAIIDHRGQVTHALPRHTRGALVGEVQGRSGITPYAWWVSRYGLWPLWALGLGIAGLALVLRRR

Specific function: Transfers the fatty acyl group on membrane lipoproteins [H]

COG id: COG0815

COG function: function code M; Apolipoprotein N-acyltransferase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CN hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI1786878, Length=455, Percent_Identity=33.4065934065934, Blast_Score=218, Evalue=8e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004563
- InterPro:   IPR003010 [H]

Pfam domain/function: PF00795 CN_hydrolase [H]

EC number: 2.3.1.- [C]

Molecular weight: Translated: 59610; Mature: 59610

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPSSIQSMMSALPTLPALLQHFGQTPTRSRLSWLQFVIVLVAGSAHAASLAWPFPFVFA
CCCHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEE
QGQPLWGLQLLALTLLAAQLDGCRSWGRTAWLGGTFSAAMLCGTFWWLFISMHDYGGLAA
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCHHH
PLTVLAIVLLAVFLGLYYAAAAALFVVLAPAQRAQRALVFAALWLLAELARVKLFTGFPW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCC
GEGGYAHVDGWARPLAAWVGVHGLTFLAALVAASLAVCLRARKTRWLAAISLVFVSVAVA
CCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WLPATDVAYGQDQPPLLPVTLLQGNIPQNEKFQPGTGVVTSLRWYGEQLRDAKTALVVAP
HCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECC
ETAIPLLPQQLPPGYWQAVQGRFAVGEQAALIGMPLGNTQTGYANSVLGLKPASSTGSSP
CCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCCCC
NPAQPYRYDKHHLVPFGEFIPPGFRWFTNMMNIPLGDFNRGTVVQASFDWKGQRLAPNIC
CCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCHHH
YEDLFGEELGARFTDPALAPTMFVNLSNIAWFGNTVAIDQHLQISRMRALEFSRPMLRAT
HHHHHHHHHCCCCCCCCCCHHHEEEECCCEEECCEEEECCHHHHHHHHHHHHCCCHHHCC
NTGATAIIDHRGQVTHALPRHTRGALVGEVQGRSGITPYAWWVSRYGLWPLWALGLGIAG
CCCCEEEEECCCCHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHH
LALVLRRR
HHHHHHCC
>Mature Secondary Structure
MEPSSIQSMMSALPTLPALLQHFGQTPTRSRLSWLQFVIVLVAGSAHAASLAWPFPFVFA
CCCHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEE
QGQPLWGLQLLALTLLAAQLDGCRSWGRTAWLGGTFSAAMLCGTFWWLFISMHDYGGLAA
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCHHH
PLTVLAIVLLAVFLGLYYAAAAALFVVLAPAQRAQRALVFAALWLLAELARVKLFTGFPW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCC
GEGGYAHVDGWARPLAAWVGVHGLTFLAALVAASLAVCLRARKTRWLAAISLVFVSVAVA
CCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WLPATDVAYGQDQPPLLPVTLLQGNIPQNEKFQPGTGVVTSLRWYGEQLRDAKTALVVAP
HCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECC
ETAIPLLPQQLPPGYWQAVQGRFAVGEQAALIGMPLGNTQTGYANSVLGLKPASSTGSSP
CCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCCCC
NPAQPYRYDKHHLVPFGEFIPPGFRWFTNMMNIPLGDFNRGTVVQASFDWKGQRLAPNIC
CCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCHHH
YEDLFGEELGARFTDPALAPTMFVNLSNIAWFGNTVAIDQHLQISRMRALEFSRPMLRAT
HHHHHHHHHCCCCCCCCCCHHHEEEECCCEEECCEEEECCHHHHHHHHHHHHCCCHHHCC
NTGATAIIDHRGQVTHALPRHTRGALVGEVQGRSGITPYAWWVSRYGLWPLWALGLGIAG
CCCCEEEEECCCCHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHH
LALVLRRR
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Transferases; Acyltransferases; Transferring groups other than amino-acyl groups [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA