| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is gmhB [H]
Identifier: 91790039
GI number: 91790039
Start: 4418906
End: 4419490
Strand: Reverse
Name: gmhB [H]
Synonym: Bpro_4201
Alternate gene names: 91790039
Gene position: 4419490-4418906 (Counterclockwise)
Preceding gene: 91790040
Following gene: 91790038
Centisome position: 84.99
GC content: 65.3
Gene sequence:
>585_bases ATGCAAAGCACCATGAAACTCGTCATCCTTGACCGCGACGGCACCATCAACAGCGACAGCGACGACTTCGTCAAGACGCC GGAGGAATGGCTGCCGCTGCCCGGTGCGCTGGAGGCGATTGCCCGGCTCAACCATGCAGGCTGGCATGTCGTCATTGCAT CCAACCAGTCAGGCCTGGGGCGGGGCTTGTTTGATGTGGCCTCGCTCAATGCGATACACGCCAAAATGAACAAGATGCTG GCCGCCCTCGGCGGGCGCGTCGATGCCGTGTTTTACTGTCCGCACAGCCCCGAGGAAAGCTGTAACTGCCGCAAACCGCT GCCGGGCCTGTTCGAGCAGATTGGCGCGCGTTTTGGTGTGCCACTCAAGGGGGTGCCCACCGCCGGCGATTCCCTGCGCG ATCTGCTGGCGGGGGCCGCGGCCGGCTGCGAGCCGCACCTGGTGCTCACCGGCAAGTCGGCGCAATACCGCAACGGCGTG CCGCCCGAAGGCATGCCGCCGGGCACCTTGGTGCATCGCGACCTGTCGGCCTTTGCCGACTTCATCCTGGAGCGCAGTGC CCGGCCCGCACCAGCGTCGCTATAA
Upstream 100 bases:
>100_bases CAACCGCCTCGGCCTGCTGGCCACGCTGCACCAGGCCATGAACCGCGTGGCCGACCTGTCCAAGCTGGCAACATGAGCCC CCTCGCAGTCTGACCCTTCA
Downstream 100 bases:
>100_bases AGAAGATAGCTGACTGTGCCCGTGAAGTAGGGGTGTAGTGGCTGCAGGCCTTCAGAGAACTTTCAAATTCACCCCGAACG CCGGAAACACCTGACATGCC
Product: D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase
Products: NA
Alternate protein names: D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [H]
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MQSTMKLVILDRDGTINSDSDDFVKTPEEWLPLPGALEAIARLNHAGWHVVIASNQSGLGRGLFDVASLNAIHAKMNKML AALGGRVDAVFYCPHSPEESCNCRKPLPGLFEQIGARFGVPLKGVPTAGDSLRDLLAGAAAGCEPHLVLTGKSAQYRNGV PPEGMPPGTLVHRDLSAFADFILERSARPAPASL
Sequences:
>Translated_194_residues MQSTMKLVILDRDGTINSDSDDFVKTPEEWLPLPGALEAIARLNHAGWHVVIASNQSGLGRGLFDVASLNAIHAKMNKML AALGGRVDAVFYCPHSPEESCNCRKPLPGLFEQIGARFGVPLKGVPTAGDSLRDLLAGAAAGCEPHLVLTGKSAQYRNGV PPEGMPPGTLVHRDLSAFADFILERSARPAPASL >Mature_194_residues MQSTMKLVILDRDGTINSDSDDFVKTPEEWLPLPGALEAIARLNHAGWHVVIASNQSGLGRGLFDVASLNAIHAKMNKML AALGGRVDAVFYCPHSPEESCNCRKPLPGLFEQIGARFGVPLKGVPTAGDSLRDLLAGAAAGCEPHLVLTGKSAQYRNGV PPEGMPPGTLVHRDLSAFADFILERSARPAPASL
Specific function: Converts the D-glycero-beta-D-manno-heptose 1,7- bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1- phosphate by removing the phosphate group at the C-7 position [H]
COG id: COG0241
COG function: function code E; Histidinol phosphatase and related phosphatases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gmhB family [H]
Homologues:
Organism=Escherichia coli, GI1786399, Length=160, Percent_Identity=33.125, Blast_Score=91, Evalue=6e-20, Organism=Escherichia coli, GI87082027, Length=141, Percent_Identity=31.2056737588652, Blast_Score=75, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006549 - InterPro: IPR006543 - InterPro: IPR013954 [H]
Pfam domain/function: PF08645 PNK3P [H]
EC number: NA
Molecular weight: Translated: 20589; Mature: 20589
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSTMKLVILDRDGTINSDSDDFVKTPEEWLPLPGALEAIARLNHAGWHVVIASNQSGLG CCCCEEEEEECCCCCCCCCCCHHHCCCHHHCCCCHHHHHHHHHCCCCEEEEEECCCCCCC RGLFDVASLNAIHAKMNKMLAALGGRVDAVFYCPHSPEESCNCRKPLPGLFEQIGARFGV CCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCC PLKGVPTAGDSLRDLLAGAAAGCEPHLVLTGKSAQYRNGVPPEGMPPGTLVHRDLSAFAD CCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCHHCCCCCCCCCCCCHHHHHHHHHHHH FILERSARPAPASL HHHHHCCCCCCCCC >Mature Secondary Structure MQSTMKLVILDRDGTINSDSDDFVKTPEEWLPLPGALEAIARLNHAGWHVVIASNQSGLG CCCCEEEEEECCCCCCCCCCCHHHCCCHHHCCCCHHHHHHHHHCCCCEEEEEECCCCCCC RGLFDVASLNAIHAKMNKMLAALGGRVDAVFYCPHSPEESCNCRKPLPGLFEQIGARFGV CCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCC PLKGVPTAGDSLRDLLAGAAAGCEPHLVLTGKSAQYRNGVPPEGMPPGTLVHRDLSAFAD CCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCHHCCCCCCCCCCCCHHHHHHHHHHHH FILERSARPAPASL HHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043; 12101286 [H]