| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is plsC [H]
Identifier: 91790038
GI number: 91790038
Start: 4418040
End: 4418810
Strand: Reverse
Name: plsC [H]
Synonym: Bpro_4200
Alternate gene names: 91790038
Gene position: 4418810-4418040 (Counterclockwise)
Preceding gene: 91790039
Following gene: 91790037
Centisome position: 84.97
GC content: 62.13
Gene sequence:
>771_bases ATGCCCCTGATTCGATCCATTCTGCACATTCTGTGGATGGCCCTCACGGTGATTCCGTGGGCCATTTTCGTGATCATTGC CTCCATCTTCGTCAGCAGCACCACGATGTACTGGATGTGCGCCGGCTGGCTGCGCCTGGCCGTCAGCAGCGGCACGGTGA TTCTCGGCATCAAAAACCGGGTGACGGGCTGGGAAAACCTGCCCACGGGCAAAACCAGCGCCGCGGTGCTGCTGGTCAAG CACCAGAGCACCTGGGAGACGTTTTGCATGCCTACGCTGATGCCGCATCCGCTGGCCTACGTGTTCAAGAAAGAGCTGCT TTACGTGCCGTTTTTTGGCTGGGCCATGGCGCGCATGGACATGATCCACATCGACCGCAGCCAGCGGGCGCAGGCCTTCA ACAAGGTCGTCGCGCAGGGCAAGCGGCTGATGAGCCAGGGCACCTGGGTGATCATGTTCCCCGAGGGCACACGAATCCCG CGCGGGCAAAAAGGGGTTTACAAATCCGGGGGGACCCGCCTGGCCATTGAGACCGGCGCGCCTGTCATTCCGATTGCCGT GACGTCGGCCAAGTGCTGGCCGCGCAAAGCCTTCATCAAAAGGCCGGGCGTGGTGGACATCTCGATCGGCAAGCCGATCG ACAGCACCGGCCGAAAACCCGATGAACTGATGCGGGAAGTGGAAGCGTGGATTGAAGCCGAGATGCACCGCCTCGACCCG GAGGCTTACACCACCGTCGGTGGCGCTGTGCCAACCGTGCCAGCGGCCTGA
Upstream 100 bases:
>100_bases TATAAAGAAGATAGCTGACTGTGCCCGTGAAGTAGGGGTGTAGTGGCTGCAGGCCTTCAGAGAACTTTCAAATTCACCCC GAACGCCGGAAACACCTGAC
Downstream 100 bases:
>100_bases GCCATTCAGGCGTGCAATCCGTGATCGGTCTGGTGCCCGGCCGCCGCGCCCGCTAAACTGCCATGATGCAAAGGCTTGTC CAGCTCACTCTCGATCTCTT
Product: 1-acyl-sn-glycerol-3-phosphate acyltransferase
Products: NA
Alternate protein names: 1-AGP acyltransferase; 1-AGPAT; Lysophosphatidic acid acyltransferase; LPAAT [H]
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MPLIRSILHILWMALTVIPWAIFVIIASIFVSSTTMYWMCAGWLRLAVSSGTVILGIKNRVTGWENLPTGKTSAAVLLVK HQSTWETFCMPTLMPHPLAYVFKKELLYVPFFGWAMARMDMIHIDRSQRAQAFNKVVAQGKRLMSQGTWVIMFPEGTRIP RGQKGVYKSGGTRLAIETGAPVIPIAVTSAKCWPRKAFIKRPGVVDISIGKPIDSTGRKPDELMREVEAWIEAEMHRLDP EAYTTVGGAVPTVPAA
Sequences:
>Translated_256_residues MPLIRSILHILWMALTVIPWAIFVIIASIFVSSTTMYWMCAGWLRLAVSSGTVILGIKNRVTGWENLPTGKTSAAVLLVK HQSTWETFCMPTLMPHPLAYVFKKELLYVPFFGWAMARMDMIHIDRSQRAQAFNKVVAQGKRLMSQGTWVIMFPEGTRIP RGQKGVYKSGGTRLAIETGAPVIPIAVTSAKCWPRKAFIKRPGVVDISIGKPIDSTGRKPDELMREVEAWIEAEMHRLDP EAYTTVGGAVPTVPAA >Mature_255_residues PLIRSILHILWMALTVIPWAIFVIIASIFVSSTTMYWMCAGWLRLAVSSGTVILGIKNRVTGWENLPTGKTSAAVLLVKH QSTWETFCMPTLMPHPLAYVFKKELLYVPFFGWAMARMDMIHIDRSQRAQAFNKVVAQGKRLMSQGTWVIMFPEGTRIPR GQKGVYKSGGTRLAIETGAPVIPIAVTSAKCWPRKAFIKRPGVVDISIGKPIDSTGRKPDELMREVEAWIEAEMHRLDPE AYTTVGGAVPTVPAA
Specific function: Converts lysophosphatidic acid (LPA) into phosphatidic acid by incorporating acyl moiety at the 2 position [H]
COG id: COG0204
COG function: function code I; 1-acyl-sn-glycerol-3-phosphate acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI5453718, Length=183, Percent_Identity=27.3224043715847, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI15100175, Length=183, Percent_Identity=27.3224043715847, Blast_Score=72, Evalue=7e-13, Organism=Escherichia coli, GI1789395, Length=173, Percent_Identity=28.9017341040462, Blast_Score=70, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17564032, Length=170, Percent_Identity=27.6470588235294, Blast_Score=72, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6320151, Length=227, Percent_Identity=29.5154185022026, Blast_Score=80, Evalue=3e-16, Organism=Drosophila melanogaster, GI281364648, Length=194, Percent_Identity=27.319587628866, Blast_Score=80, Evalue=9e-16, Organism=Drosophila melanogaster, GI24582856, Length=194, Percent_Identity=27.319587628866, Blast_Score=80, Evalue=9e-16, Organism=Drosophila melanogaster, GI24582854, Length=194, Percent_Identity=27.319587628866, Blast_Score=80, Evalue=9e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002123 - InterPro: IPR004552 [H]
Pfam domain/function: PF01553 Acyltransferase [H]
EC number: =2.3.1.51 [H]
Molecular weight: Translated: 28466; Mature: 28335
Theoretical pI: Translated: 10.46; Mature: 10.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLIRSILHILWMALTVIPWAIFVIIASIFVSSTTMYWMCAGWLRLAVSSGTVILGIKNR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC VTGWENLPTGKTSAAVLLVKHQSTWETFCMPTLMPHPLAYVFKKELLYVPFFGWAMARMD CCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHH MIHIDRSQRAQAFNKVVAQGKRLMSQGTWVIMFPEGTRIPRGQKGVYKSGGTRLAIETGA HHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEECCC PVIPIAVTSAKCWPRKAFIKRPGVVDISIGKPIDSTGRKPDELMREVEAWIEAEMHRLDP CEEEEEEECCCCCCHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC EAYTTVGGAVPTVPAA HHHHHCCCCCCCCCCC >Mature Secondary Structure PLIRSILHILWMALTVIPWAIFVIIASIFVSSTTMYWMCAGWLRLAVSSGTVILGIKNR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC VTGWENLPTGKTSAAVLLVKHQSTWETFCMPTLMPHPLAYVFKKELLYVPFFGWAMARMD CCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHH MIHIDRSQRAQAFNKVVAQGKRLMSQGTWVIMFPEGTRIPRGQKGVYKSGGTRLAIETGA HHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEECCC PVIPIAVTSAKCWPRKAFIKRPGVVDISIGKPIDSTGRKPDELMREVEAWIEAEMHRLDP CEEEEEEECCCCCCHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC EAYTTVGGAVPTVPAA HHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]