| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91790029
Identifier: 91790029
GI number: 91790029
Start: 4404691
End: 4405065
Strand: Reverse
Name: 91790029
Synonym: Bpro_4191
Alternate gene names: NA
Gene position: 4405065-4404691 (Counterclockwise)
Preceding gene: 91790030
Following gene: 91790028
Centisome position: 84.71
GC content: 66.13
Gene sequence:
>375_bases ATGCAGCACCTCGGTGCGCGGCTGCTGCGGGTGGAGGCCGGCTTGTGCGAAATTGCACTGCCTTACTCAGAACGTGTCAC CCAGCAGCAGGGCGGCTTCCATGGCGGCGCCATGGGCGCGCTGGCAGACATTGCCGGCGGCTATGCCGCGCTGACGGTGG CGCCTCCCGAGGCCGAAGTCACCACGGTCGAATACAAGATCAATTTTCTGGCCGCCTTCAGGGATGGTGAGCTCCGGGCA ACCGGCCGTGTCGCCCGGGCCGGCAAGCGCATCATCGTGACCACCGCCGACGTGGTGCACGTCGACGCCAATGGCAAGGA AAGCGCCTGCGCGCTGATGCAGCAGACGCTCGTTCCCGTGCCCAAGACCTACTGA
Upstream 100 bases:
>100_bases CCCCCTCCACTCCCGAAAGAAGGCTTTCCCCATGGACGCACTTTCCGCGCCGTCAGCGCTTTTTCAGCGCATTGAAGCGA GCTTTTTACGCCAGGGCATG
Downstream 100 bases:
>100_bases CAACCCGCAAGAACCAGCCCGGTCGCCCCCATGCACCTGGCTACCTCTGTAACCTCCCGCGAAAGACGCCATCATGACCA ACCTGCCAGGACTTGACTTC
Product: phenylacetic acid degradation-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MQHLGARLLRVEAGLCEIALPYSERVTQQQGGFHGGAMGALADIAGGYAALTVAPPEAEVTTVEYKINFLAAFRDGELRA TGRVARAGKRIIVTTADVVHVDANGKESACALMQQTLVPVPKTY
Sequences:
>Translated_124_residues MQHLGARLLRVEAGLCEIALPYSERVTQQQGGFHGGAMGALADIAGGYAALTVAPPEAEVTTVEYKINFLAAFRDGELRA TGRVARAGKRIIVTTADVVHVDANGKESACALMQQTLVPVPKTY >Mature_124_residues MQHLGARLLRVEAGLCEIALPYSERVTQQQGGFHGGAMGALADIAGGYAALTVAPPEAEVTTVEYKINFLAAFRDGELRA TGRVARAGKRIIVTTADVVHVDANGKESACALMQQTLVPVPKTY
Specific function: Unknown
COG id: COG2050
COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thioesterase PaaI family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003736 - InterPro: IPR006683 [H]
Pfam domain/function: PF03061 4HBT [H]
EC number: NA
Molecular weight: Translated: 13109; Mature: 13109
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQHLGARLLRVEAGLCEIALPYSERVTQQQGGFHGGAMGALADIAGGYAALTVAPPEAEV CCCHHHHHEEEECCCEEEECCHHHHHHHHCCCCCCCHHHHHHHHCCCEEEEEECCCCCCE TTVEYKINFLAAFRDGELRATGRVARAGKRIIVTTADVVHVDANGKESACALMQQTLVPV EEEEEEEEEEEEECCCCEEECCHHHHCCCEEEEEEEEEEEEECCCCHHHHHHHHHHCCCC PKTY CCCC >Mature Secondary Structure MQHLGARLLRVEAGLCEIALPYSERVTQQQGGFHGGAMGALADIAGGYAALTVAPPEAEV CCCHHHHHEEEECCCEEEECCHHHHHHHHCCCCCCCHHHHHHHHCCCEEEEEECCCCCCE TTVEYKINFLAAFRDGELRATGRVARAGKRIIVTTADVVHVDANGKESACALMQQTLVPV EEEEEEEEEEEEECCCCEEECCHHHHCCCEEEEEEEEEEEEECCCCHHHHHHHHHHCCCC PKTY CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8899719; 11427726 [H]