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The map label for this gene is fmt [H]

Identifier: 91790011

GI number: 91790011

Start: 4388749

End: 4389906

Strand: Reverse

Name: fmt [H]

Synonym: Bpro_4173

Alternate gene names: 91790011

Gene position: 4389906-4388749 (Counterclockwise)

Preceding gene: 91790012

Following gene: 91790009

Centisome position: 84.42

GC content: 65.37

Gene sequence:

>1158_bases
ATGAAATGTGCATTGGTGGGGTCCCGTTTTTTCGCTGCTTCGGTGTTTGAGGCGCTACGCAAGGAAGAAGGCATCGAGTT
CACCAGCATCGTCGCTCCCGCTGTGGACGATCGGCTGGCGCTGGCTGCGCAGGCGGCCGGCGTCGCGGTGCATGTGCTTG
AGAACCCCAGGTTCGTGCCGGGCAACGCGATTGCCGAGGGCACCGACCTCATCATCGCCGCGCACACGCACGCACGGGTG
AGCGACGAGGCGCTCGCGCGTTCGCGCCTGGGCGGCGTCGGTTATCACCCCTCGCTGCTGCCCCGGCATCGTGGCATCGC
CGCCGTCGAATGGACGATTCTGGAAGGCGACCCGATCGCTGGTGGCTCGATCTATCACCTGGCCGACGGGTGGGACGCGG
GCGCCATCGCCGCCCAGGACTGGTGCTTTGTCGCCAAGGGCGAGACGGCGCGCGAATTATGGGAGCGCGCTCTGGCGCCG
ATGGGTCTGGCCCTTTTGCGCAAGGTGGTTCATCACGCCCGCATGCAGGGTTCCGTTCCCGCCTACCCGCAAGATCCGGG
CTTTGCCACCAAGGCCCCCATGATCCGCAAGTCGGTCGTGTTGACCGAGGAGGTCTCCTCGACGACCACCTCGCTTGTCG
TCTCTATCGTGGGGGCTGACCGCCATGGCATCGTGAGCTCGCTGGCCGAACGGGCGGAGCGTTTCGGTGCCAACTGGGCG
GCGAGCCGCATGACAAAACTGGCCAATGAATTTGCCGGCACGGTTCACTTCGAGGTGCCGCCCGAGAACGCGGACGCACT
GGCGGCCGCGCTGCGCGGACTCGAGTCCAGCGGCTTGCAGGTGGTCATTGCCCGGAGCGACGGCGCCAGGGTGCCCACCT
CGCTGCGCGTGGTTGAGCTTGAGCTGGTCGGCGAGGATCGGGTCGGCATCGTCAGCAAGCTGACGAAGATACTGGCCGAG
CGCGCCATCAGCATCGAGAGCATTCATACCGAAATCATCCGCAGCGGCGTGTCCGGCAAACAGACCTTCAAGATCGAAGC
GCACTTGCTGGTGCCTGCCGCCCTGTCCGTCGATGCGTTGCGACAGGAACTCGGCACCTTGGCCCGCGAGATGATGGTCG
ACATCGCTTTGGGAGAGCGGCAGAATCCCGCTCAATGA

Upstream 100 bases:

>100_bases
GCTGCCGACGCCCTGGCTGGCTGAAGACCGGCCGGCGCCGGAACTTCCCCTTCAGGAATTTTCCTTTACTTTTCCTTTTA
ATGAATGAAGAGATGTGTCA

Downstream 100 bases:

>100_bases
GTTGAATGCCGGCCCGGCAGCAGGCAGCGCACGCCGGCATTCAGTCCGGCTGCAACCTCATCGGCCAGAACCATCCCGTC
CGCTCAACCCAGCAGGCGAA

Product: formyl transferase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MKCALVGSRFFAASVFEALRKEEGIEFTSIVAPAVDDRLALAAQAAGVAVHVLENPRFVPGNAIAEGTDLIIAAHTHARV
SDEALARSRLGGVGYHPSLLPRHRGIAAVEWTILEGDPIAGGSIYHLADGWDAGAIAAQDWCFVAKGETARELWERALAP
MGLALLRKVVHHARMQGSVPAYPQDPGFATKAPMIRKSVVLTEEVSSTTTSLVVSIVGADRHGIVSSLAERAERFGANWA
ASRMTKLANEFAGTVHFEVPPENADALAAALRGLESSGLQVVIARSDGARVPTSLRVVELELVGEDRVGIVSKLTKILAE
RAISIESIHTEIIRSGVSGKQTFKIEAHLLVPAALSVDALRQELGTLAREMMVDIALGERQNPAQ

Sequences:

>Translated_385_residues
MKCALVGSRFFAASVFEALRKEEGIEFTSIVAPAVDDRLALAAQAAGVAVHVLENPRFVPGNAIAEGTDLIIAAHTHARV
SDEALARSRLGGVGYHPSLLPRHRGIAAVEWTILEGDPIAGGSIYHLADGWDAGAIAAQDWCFVAKGETARELWERALAP
MGLALLRKVVHHARMQGSVPAYPQDPGFATKAPMIRKSVVLTEEVSSTTTSLVVSIVGADRHGIVSSLAERAERFGANWA
ASRMTKLANEFAGTVHFEVPPENADALAAALRGLESSGLQVVIARSDGARVPTSLRVVELELVGEDRVGIVSKLTKILAE
RAISIESIHTEIIRSGVSGKQTFKIEAHLLVPAALSVDALRQELGTLAREMMVDIALGERQNPAQ
>Mature_385_residues
MKCALVGSRFFAASVFEALRKEEGIEFTSIVAPAVDDRLALAAQAAGVAVHVLENPRFVPGNAIAEGTDLIIAAHTHARV
SDEALARSRLGGVGYHPSLLPRHRGIAAVEWTILEGDPIAGGSIYHLADGWDAGAIAAQDWCFVAKGETARELWERALAP
MGLALLRKVVHHARMQGSVPAYPQDPGFATKAPMIRKSVVLTEEVSSTTTSLVVSIVGADRHGIVSSLAERAERFGANWA
ASRMTKLANEFAGTVHFEVPPENADALAAALRGLESSGLQVVIARSDGARVPTSLRVVELELVGEDRVGIVSKLTKILAE
RAISIESIHTEIIRSGVSGKQTFKIEAHLLVPAALSVDALRQELGTLAREMMVDIALGERQNPAQ

Specific function: Modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by:(I) promoting its recognition by IF2 and (II) impairing its binding to EFTu-

COG id: COG2716

COG function: function code E; Glycine cleavage system regulatory protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fmt family [H]

Homologues:

Organism=Homo sapiens, GI238814322, Length=195, Percent_Identity=33.8461538461538, Blast_Score=97, Evalue=4e-20,
Organism=Homo sapiens, GI21614513, Length=198, Percent_Identity=33.8383838383838, Blast_Score=94, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI133930964, Length=369, Percent_Identity=29.2682926829268, Blast_Score=85, Evalue=5e-17,
Organism=Drosophila melanogaster, GI24585660, Length=210, Percent_Identity=30.4761904761905, Blast_Score=80, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005794
- InterPro:   IPR005793
- InterPro:   IPR002376
- InterPro:   IPR011034
- InterPro:   IPR001555
- InterPro:   IPR015518 [H]

Pfam domain/function: PF02911 Formyl_trans_C; PF00551 Formyl_trans_N [H]

EC number: =2.1.2.9 [H]

Molecular weight: Translated: 40977; Mature: 40977

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKCALVGSRFFAASVFEALRKEEGIEFTSIVAPAVDDRLALAAQAAGVAVHVLENPRFVP
CCEEEECCHHHHHHHHHHHHHHCCCCEEHEECCCCCHHHHHHHHHCCEEEEEECCCEECC
GNAIAEGTDLIIAAHTHARVSDEALARSRLGGVGYHPSLLPRHRGIAAVEWTILEGDPIA
CCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCC
GGSIYHLADGWDAGAIAAQDWCFVAKGETARELWERALAPMGLALLRKVVHHARMQGSVP
CCCEEEECCCCCCCCEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
AYPQDPGFATKAPMIRKSVVLTEEVSSTTTSLVVSIVGADRHGIVSSLAERAERFGANWA
CCCCCCCCCCCCCHHHHHEEEHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHCCCHH
ASRMTKLANEFAGTVHFEVPPENADALAAALRGLESSGLQVVIARSDGARVPTSLRVVEL
HHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEEEEE
ELVGEDRVGIVSKLTKILAERAISIESIHTEIIRSGVSGKQTFKIEAHLLVPAALSVDAL
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECHHHHHHHH
RQELGTLAREMMVDIALGERQNPAQ
HHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKCALVGSRFFAASVFEALRKEEGIEFTSIVAPAVDDRLALAAQAAGVAVHVLENPRFVP
CCEEEECCHHHHHHHHHHHHHHCCCCEEHEECCCCCHHHHHHHHHCCEEEEEECCCEECC
GNAIAEGTDLIIAAHTHARVSDEALARSRLGGVGYHPSLLPRHRGIAAVEWTILEGDPIA
CCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCC
GGSIYHLADGWDAGAIAAQDWCFVAKGETARELWERALAPMGLALLRKVVHHARMQGSVP
CCCEEEECCCCCCCCEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
AYPQDPGFATKAPMIRKSVVLTEEVSSTTTSLVVSIVGADRHGIVSSLAERAERFGANWA
CCCCCCCCCCCCCHHHHHEEEHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHCCCHH
ASRMTKLANEFAGTVHFEVPPENADALAAALRGLESSGLQVVIARSDGARVPTSLRVVEL
HHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEEEEE
ELVGEDRVGIVSKLTKILAERAISIESIHTEIIRSGVSGKQTFKIEAHLLVPAALSVDAL
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECHHHHHHHH
RQELGTLAREMMVDIALGERQNPAQ
HHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA