| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91790009
Identifier: 91790009
GI number: 91790009
Start: 4387038
End: 4388375
Strand: Reverse
Name: 91790009
Synonym: Bpro_4171
Alternate gene names: NA
Gene position: 4388375-4387038 (Counterclockwise)
Preceding gene: 91790011
Following gene: 91790008
Centisome position: 84.39
GC content: 65.25
Gene sequence:
>1338_bases ATGAAAATCATCCGCATTGGTGCCGGTGCTGGTTACTCGGGGGACCGCATTCCGCCCGCCGTAGAGCTGGCCGAAAAGGG CAACCTGGACTATCTGGTGTTTGAGTGCCTGGCAGAGCGCACCATTGCGCTGGCCCAGTTGGAGCGAAGCAGGGATGCCC GTCTGGGCTTTGACCCCTTGCTCCGGGACCGCATGGAGGCGGTGCTGCCTTCATGCGTCGCCCAGGGTGTGAAGATCATC ACCAACATGGGGGCCGCAAATCCCCAGGCGGCGGGTGAAGAAATCATCAGGATCGCGCGGGAGCTGGGGCTGCAGCGGCT GAAGGTGGCGGTGGTCCAGGGCGACGATGTGCTGCCGCGCCTCCATGATCACGAGCTGACCATCATGGAGAGTGGTGCGC CGCTTCGCTCATTGGGTGACACCGTGCTTTCAGCGAACGCGTACATCGGTGCCGAGGCGCTGGTGAGGGCGCTGCGCCTG GGCGCCGATGTGGTCGTCACGGGACGTGTCGCCGATCCGGCCCTGTTTCTCGCCCCCCTCATTCATGAGTTTGGCTGGTC CATGTCGGACTGGCACATGATGGGCCGGGGCATTGTGGTCGGGCACCTTCTGGAGTGCGCGGGGCAGGTCACGGGCGGAT ATTTTGCCGATCCTGGTTACCGCGATGTGCCTGACCTGGCCAGGCTTGGTTTTCCCCTGGCCGAAGTATCCGAAGACGGG CGCGCCATCATCACCAAGGTGGAGGGCTCGGGCGGCTGCGTCACCACCGCCACCTGCGCGGCGCAGCTCTTGTATGAGGT CGAAAACCCCGCCAGCTACCTGCAGCCGGATGTGGTCGCGGATTTTTCAGGTGTCACGCTGACCCAAGTCGGGCCCGACC GGGTACAGATCGACGGTGCCACTGGTCATCCGCGCCCGGCAACCTTGAAGGTGACCGTGGGACACCGTGACGGATTCATC GGGGAAGGGCAGATTTCCTACGCCGGCCTGGGGGCCGAGGCGCGGGGCCGGCTGGCCCTGGATGTACTGCGGCAGCGCCT GGAGAGCTCGGGCATCCAGGCGCTCGATAGCCGGTACGAGCTCATCGGCGTGAACGCCATTCATGGGGAAACCCTGGCCC GCGGCTATGAGCCTTATGAAGTCCGCGCCCGCGTGGCCATGCGGGTGGAAACCAGGCAGGACGCCGAGCGGGTGGCCAAT GAGGTGGAGGCGATGTACCTCAACGGGCCCGCCAGCGGCGGCGGTGTCACCAAGTCGGTCCGCGAGGTGATCGCCGCGGC TTCCACGCTGGTTCCGCGCGACCTTGTCCAGCCAACTGTCACCACGATGGAGCTTTAA
Upstream 100 bases:
>100_bases TCGGCCATAGTTCGTCTGGTGCGGCCTGTACGACCGATACGACCGGTGTGGCCCGGTTCCGCTGCCCTGCGACATAGAGA CATTTTTGAAAGACCATTCC
Downstream 100 bases:
>100_bases AAATGCTGCTGCGAGAAATTGCCCATTCCCGTACCGGAGACAAGGGAAACCGGTCGACCATTTCCGTCATTGCCTACGAT CTCAAGGACTTCCCTGCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 445; Mature: 445
Protein sequence:
>445_residues MKIIRIGAGAGYSGDRIPPAVELAEKGNLDYLVFECLAERTIALAQLERSRDARLGFDPLLRDRMEAVLPSCVAQGVKII TNMGAANPQAAGEEIIRIARELGLQRLKVAVVQGDDVLPRLHDHELTIMESGAPLRSLGDTVLSANAYIGAEALVRALRL GADVVVTGRVADPALFLAPLIHEFGWSMSDWHMMGRGIVVGHLLECAGQVTGGYFADPGYRDVPDLARLGFPLAEVSEDG RAIITKVEGSGGCVTTATCAAQLLYEVENPASYLQPDVVADFSGVTLTQVGPDRVQIDGATGHPRPATLKVTVGHRDGFI GEGQISYAGLGAEARGRLALDVLRQRLESSGIQALDSRYELIGVNAIHGETLARGYEPYEVRARVAMRVETRQDAERVAN EVEAMYLNGPASGGGVTKSVREVIAAASTLVPRDLVQPTVTTMEL
Sequences:
>Translated_445_residues MKIIRIGAGAGYSGDRIPPAVELAEKGNLDYLVFECLAERTIALAQLERSRDARLGFDPLLRDRMEAVLPSCVAQGVKII TNMGAANPQAAGEEIIRIARELGLQRLKVAVVQGDDVLPRLHDHELTIMESGAPLRSLGDTVLSANAYIGAEALVRALRL GADVVVTGRVADPALFLAPLIHEFGWSMSDWHMMGRGIVVGHLLECAGQVTGGYFADPGYRDVPDLARLGFPLAEVSEDG RAIITKVEGSGGCVTTATCAAQLLYEVENPASYLQPDVVADFSGVTLTQVGPDRVQIDGATGHPRPATLKVTVGHRDGFI GEGQISYAGLGAEARGRLALDVLRQRLESSGIQALDSRYELIGVNAIHGETLARGYEPYEVRARVAMRVETRQDAERVAN EVEAMYLNGPASGGGVTKSVREVIAAASTLVPRDLVQPTVTTMEL >Mature_445_residues MKIIRIGAGAGYSGDRIPPAVELAEKGNLDYLVFECLAERTIALAQLERSRDARLGFDPLLRDRMEAVLPSCVAQGVKII TNMGAANPQAAGEEIIRIARELGLQRLKVAVVQGDDVLPRLHDHELTIMESGAPLRSLGDTVLSANAYIGAEALVRALRL GADVVVTGRVADPALFLAPLIHEFGWSMSDWHMMGRGIVVGHLLECAGQVTGGYFADPGYRDVPDLARLGFPLAEVSEDG RAIITKVEGSGGCVTTATCAAQLLYEVENPASYLQPDVVADFSGVTLTQVGPDRVQIDGATGHPRPATLKVTVGHRDGFI GEGQISYAGLGAEARGRLALDVLRQRLESSGIQALDSRYELIGVNAIHGETLARGYEPYEVRARVAMRVETRQDAERVAN EVEAMYLNGPASGGGVTKSVREVIAAASTLVPRDLVQPTVTTMEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47494; Mature: 47494
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIIRIGAGAGYSGDRIPPAVELAEKGNLDYLVFECLAERTIALAQLERSRDARLGFDPL CEEEEEECCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH LRDRMEAVLPSCVAQGVKIITNMGAANPQAAGEEIIRIARELGLQRLKVAVVQGDDVLPR HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHEEEEEEECCCCCCC LHDHELTIMESGAPLRSLGDTVLSANAYIGAEALVRALRLGADVVVTGRVADPALFLAPL CCCCEEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHH IHEFGWSMSDWHMMGRGIVVGHLLECAGQVTGGYFADPGYRDVPDLARLGFPLAEVSEDG HHHHCCCCCHHHHHCCHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHCCCHHHHCCCC RAIITKVEGSGGCVTTATCAAQLLYEVENPASYLQPDVVADFSGVTLTQVGPDRVQIDGA CEEEEEEECCCCEEHHHHHHHHHHHHHCCCHHHCCCCHHCCCCCEEEEECCCCEEEECCC TGHPRPATLKVTVGHRDGFIGEGQISYAGLGAEARGRLALDVLRQRLESSGIQALDSRYE CCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHCCEE LIGVNAIHGETLARGYEPYEVRARVAMRVETRQDAERVANEVEAMYLNGPASGGGVTKSV EEEEEEECCHHHHCCCCCHHHHHHHHEEEHHHHHHHHHHHHHHEEEECCCCCCCCHHHHH REVIAAASTLVPRDLVQPTVTTMEL HHHHHHHHHHCCHHHHCCCHHEECC >Mature Secondary Structure MKIIRIGAGAGYSGDRIPPAVELAEKGNLDYLVFECLAERTIALAQLERSRDARLGFDPL CEEEEEECCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH LRDRMEAVLPSCVAQGVKIITNMGAANPQAAGEEIIRIARELGLQRLKVAVVQGDDVLPR HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHEEEEEEECCCCCCC LHDHELTIMESGAPLRSLGDTVLSANAYIGAEALVRALRLGADVVVTGRVADPALFLAPL CCCCEEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHH IHEFGWSMSDWHMMGRGIVVGHLLECAGQVTGGYFADPGYRDVPDLARLGFPLAEVSEDG HHHHCCCCCHHHHHCCHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHCCCHHHHCCCC RAIITKVEGSGGCVTTATCAAQLLYEVENPASYLQPDVVADFSGVTLTQVGPDRVQIDGA CEEEEEEECCCCEEHHHHHHHHHHHHHCCCHHHCCCCHHCCCCCEEEEECCCCEEEECCC TGHPRPATLKVTVGHRDGFIGEGQISYAGLGAEARGRLALDVLRQRLESSGIQALDSRYE CCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHCCEE LIGVNAIHGETLARGYEPYEVRARVAMRVETRQDAERVANEVEAMYLNGPASGGGVTKSV EEEEEEECCHHHHCCCCCHHHHHHHHEEEHHHHHHHHHHHHHHEEEECCCCCCCCHHHHH REVIAAASTLVPRDLVQPTVTTMEL HHHHHHHHHHCCHHHHCCCHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA