Click here to switch to the map view.

The map label for this gene is yycF [H]

Identifier: 91789988

GI number: 91789988

Start: 4363446

End: 4363823

Strand: Direct

Name: yycF [H]

Synonym: Bpro_4150

Alternate gene names: 91789988

Gene position: 4363446-4363823 (Clockwise)

Preceding gene: 91789987

Following gene: 91789989

Centisome position: 83.91

GC content: 60.85

Gene sequence:

>378_bases
ATGAGCAAACGCATCCTGATTGCGGACGACGAACCCAACATCGTGGTGTCGCTCGAGTTTCTGATGAAACGCGAAGGGTT
CGATGTACAGGTGGCCGTGGACGGAGAGGCGGCGCTGCAGGCCATCGCCGCGCAGGTGCCGGACCTGATCCTGCTCGACA
TCATGCTGCCCAGGAAAGACGGGTTTGAGGTGTGCCAGCAAATCCGCGCCAACCCCCAGTGGCAATCGGTCAAGGTGGTG
ATGCTCACCGCCAAAGGGCGCGACACCGAGGTCAGCAAGGGCCTTGCACTCGGCGCGGACGCCTACATGACCAAACCCTT
TTCCACCAAGGATCTGGTTGCACAGGTGCGTCAACTGCTCGGACTGCCAGTGCAGTAG

Upstream 100 bases:

>100_bases
TGCAAAGCGAACCCGGCAACGGGGCCACATTCTCGTTTACACTGCCCTTCAGTCAGGGCACCGGGGCCGCAGCGCCTCAA
TAGCCAGATTGGACCAGCAC

Downstream 100 bases:

>100_bases
CCGTCCATTGGTCGACGTGCCCGCCCAACCCATTGCCCAGCCGCCATGACCCCTCGAATCCGGCTCGCTGTGGGACTCGG
CGGTCTGTATGGACTGCTGG

Product: response regulator receiver protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 124

Protein sequence:

>125_residues
MSKRILIADDEPNIVVSLEFLMKREGFDVQVAVDGEAALQAIAAQVPDLILLDIMLPRKDGFEVCQQIRANPQWQSVKVV
MLTAKGRDTEVSKGLALGADAYMTKPFSTKDLVAQVRQLLGLPVQ

Sequences:

>Translated_125_residues
MSKRILIADDEPNIVVSLEFLMKREGFDVQVAVDGEAALQAIAAQVPDLILLDIMLPRKDGFEVCQQIRANPQWQSVKVV
MLTAKGRDTEVSKGLALGADAYMTKPFSTKDLVAQVRQLLGLPVQ
>Mature_124_residues
SKRILIADDEPNIVVSLEFLMKREGFDVQVAVDGEAALQAIAAQVPDLILLDIMLPRKDGFEVCQQIRANPQWQSVKVVM
LTAKGRDTEVSKGLALGADAYMTKPFSTKDLVAQVRQLLGLPVQ

Specific function: Member of the two-component regulatory system YycG/YycF involved in the regulation of the ftsAZ operon, the yocH, ykvT, cwlO, lytE, ydjM, yjeA, yoeB genes and the tagAB and tagDEF operons. Probably phosphorylates YycF. Binds to the ftsAZ P1 promoter seque

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786599, Length=120, Percent_Identity=38.3333333333333, Blast_Score=91, Evalue=2e-20,
Organism=Escherichia coli, GI1790860, Length=117, Percent_Identity=38.4615384615385, Blast_Score=84, Evalue=4e-18,
Organism=Escherichia coli, GI1789809, Length=119, Percent_Identity=32.7731092436975, Blast_Score=80, Evalue=3e-17,
Organism=Escherichia coli, GI1788394, Length=119, Percent_Identity=36.1344537815126, Blast_Score=80, Evalue=3e-17,
Organism=Escherichia coli, GI2367329, Length=118, Percent_Identity=38.9830508474576, Blast_Score=77, Evalue=5e-16,
Organism=Escherichia coli, GI1790863, Length=121, Percent_Identity=35.5371900826446, Blast_Score=75, Evalue=1e-15,
Organism=Escherichia coli, GI1787229, Length=120, Percent_Identity=33.3333333333333, Blast_Score=72, Evalue=9e-15,
Organism=Escherichia coli, GI1786784, Length=117, Percent_Identity=35.8974358974359, Blast_Score=69, Evalue=1e-13,
Organism=Escherichia coli, GI1788713, Length=115, Percent_Identity=35.6521739130435, Blast_Score=68, Evalue=2e-13,
Organism=Escherichia coli, GI1786911, Length=113, Percent_Identity=35.3982300884956, Blast_Score=67, Evalue=3e-13,
Organism=Escherichia coli, GI1788550, Length=120, Percent_Identity=32.5, Blast_Score=65, Evalue=1e-12,
Organism=Escherichia coli, GI1790552, Length=117, Percent_Identity=32.4786324786325, Blast_Score=62, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 13736; Mature: 13605

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKRILIADDEPNIVVSLEFLMKREGFDVQVAVDGEAALQAIAAQVPDLILLDIMLPRKD
CCCCEEEECCCCCEEEEEEHHHCCCCCEEEEEECCHHHHHHHHHHCCCEEEEEEECCCCC
GFEVCQQIRANPQWQSVKVVMLTAKGRDTEVSKGLALGADAYMTKPFSTKDLVAQVRQLL
CHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCEEECCCCEEECCCCHHHHHHHHHHHH
GLPVQ
CCCCC
>Mature Secondary Structure 
SKRILIADDEPNIVVSLEFLMKREGFDVQVAVDGEAALQAIAAQVPDLILLDIMLPRKD
CCCEEEECCCCCEEEEEEHHHCCCCCEEEEEECCHHHHHHHHHHCCCEEEEEEECCCCC
GFEVCQQIRANPQWQSVKVVMLTAKGRDTEVSKGLALGADAYMTKPFSTKDLVAQVRQLL
CHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCEEECCCCEEECCCCHHHHHHHHHHHH
GLPVQ
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377; 9829949; 10878122 [H]