Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is yjcG [C]

Identifier: 91789982

GI number: 91789982

Start: 4356922

End: 4359039

Strand: Reverse

Name: yjcG [C]

Synonym: Bpro_4144

Alternate gene names: 91789982

Gene position: 4359039-4356922 (Counterclockwise)

Preceding gene: 91789983

Following gene: 91789980

Centisome position: 83.82

GC content: 61.8

Gene sequence:

>2118_bases
ATGGGAATGTTTGGCGCCGCAAATCAGTCGCAGAGCGACTTCAAGAAAGGCCTGCACAAGGTCTACGGGTGGTACACGGG
AGGCTTCATCGGTTTTGTGATCGTGCTGGCGATCCTGGAGCAGCTGGGGCTACCGAAGAACTGGATCGGTTACCTGTTCC
TGGCCGCGACGGTGCTGCTGTATGCGGGCATCGGGGTCATGAGCCGCACCAGCGATGCGGCCGAATACTACGTGGCCGGG
CGTCGCGTGCCCGCCATGTACAACGGCATGGCCACCGGGGCGGACTGGATGTCGGCGGCCTCCTTCATTGGCATGGCCGG
CACGCTGTACCTGACCGGTTACGGGGGGCTGGCCTTTATTCTGGGCTGGACCGGCGGCTACTGCCTGGTGGCGCTTTTTC
TGGCGCCTTACCTGCGCAAGTTTGGCCAGTTCACCATTCCAGACTTTTTGGGCGCACGCTATGAGGGCAACCTGCCGCGC
CTGATTGGTGTGTTCGCCGCCATTCTGTGCTCCTTCACCTACGTGGTGGCGCAGATCTATGGCGTGGGCCTGATCACTGC
GCGTCTGACCGGACTGGCATTCGAGATCGGTATCTTTGCCGGTCTGGGCGGCATTCTGGTGTGCTCGTTCCTCGGCGGCA
TGCGTGCCGTGACCTGGACCCAGGTGGCGCAGTACGTGATTCTCATCATTGCCTACCTGCTGCCGGTGATCTGGCTGTCG
GTCAAGCACACCGGCGTGCCGGTTCCGCAGGCGGTCTATGGCTACACGCTTCAGAAGGTGACAGCCAAGGAAGAACAGTT
GCTGAAGGACCCGAAAGAGCTCGAAGTACGTGATCTCTTCAAGGCGCGTTCGGAAGCGGCTGTTGCCAAACTGAAGGACG
TTCCCGCTGCCATGGCTGCCGACAAGGCCGCCGCGCAGAAGAGGCTGGACGACCTGAAAGCTGCGAACGGCGCTGTGGCC
GACATCCGGGCCGCTGAGGCAGCCTTGGCAGGACTGCCCAAGGATGAGGCTGCGGCCAGGGCTGCCTACACTGCCGCGCG
TGTCGGGAACGCCGCACGGTCTGCGCCACCGATTCGTCATGCCCAACCCTTCCCGGGCAAGGATGAAGCTGCGCAGGATA
TTTCGCGCAAAAACTTCCTGGCGCTGGTGTTCTGCCTGATGATCGGTACCGCCGCACTGCCGCACATCCTGATGCGTTAC
TACACCGTGCCTTCGGTGAAGGAAGCGCGTCAGTCGGTGAGCTGGTCGCTGTTCTTCATCTTCCTGCTCTACTTCACGGC
GCCGGCGCTGGCGGTGATGGCCAAATATGAGGTGTACACCGTGCTGGTGAACACGCCGTTTGACAGTTTGCCAGGCTGGA
TCGCGCGCTGGAACGCCGTCGACCCGACCTTGTTGTCGGTGGTGGACATCAACAAGGACGGCATCCTGCAGCTGGCCGAA
ATCAGCATTGGTGGCGACATCATTGTGTTGGCCACGCCTGAGATTGGCGGGCTGCCCTACGTGGTGTCGGGCATGGTGGC
TGCGGGTGGTCTGGCGGCTGCGCTGTCTACCGCGGATGGTTTGCTGCTGACGATTGCCAACGCGCTGTCGCATGATCTGT
ACTACAAGGTGCTGGATCCGAATGCGTCTACCGCACGCCGTGTGATGGTGTCCAAGGTGCTGTTGCTGGTTGTTGCCTTG
TGTGCGGCCTATGTGGCGGCCCAGAAGCCAGCGGACATCCTGTTCCTGGTGTCGGCTGCGTTCTCGTTCGCCGCGGCGGC
ATTCTTCCCTGCGCTGACTCTGGGCATCTTCTGGAAGCGCGCCAACAAGTGGGGTGCCTCGCTGGGCATGATCGCAGGCT
TGGGCACCACCTTCTACTACATGATGACCACCCAGCCATGGCTCTACAAGCTGACCCACAGCGGAGCCGCCATCACGCCT
GAAATCCTCAAGGCCAATACATGGTGGGATATTGCCCCGATCTCGGCCGGCCTGTTTGGTGTGCCGCTGGGCTTTGCAGT
AATCATCGTTGTGTCGCTGCTGACCAAGGCCCCGGGCAAGGACGTTCAGGAGCTGGTGGAGCATGTGCGTTACCCCAGCC
TGGATGGCAAGGTTGCCGCTGCCGGTGCCGGCCACTGA

Upstream 100 bases:

>100_bases
CGCAAGGGGCTCTGGTGGTGTACTGCGTGATCATCTGGTTCTACGCGCGCTACATGAACAACCTGGACAACGAATACGGC
GTGGCCGAAGGAGAAGAATA

Downstream 100 bases:

>100_bases
GCACGGTCGCAGCTGAATCAAAAACCCCGCCTTGGCGGGGTTTTTTACGGAGTCTTCTCGCCGGGACTGGTCGGGCTAGG
AGCAATACAGTTCAGTAAGT

Product: Na+/solute symporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 705; Mature: 704

Protein sequence:

>705_residues
MGMFGAANQSQSDFKKGLHKVYGWYTGGFIGFVIVLAILEQLGLPKNWIGYLFLAATVLLYAGIGVMSRTSDAAEYYVAG
RRVPAMYNGMATGADWMSAASFIGMAGTLYLTGYGGLAFILGWTGGYCLVALFLAPYLRKFGQFTIPDFLGARYEGNLPR
LIGVFAAILCSFTYVVAQIYGVGLITARLTGLAFEIGIFAGLGGILVCSFLGGMRAVTWTQVAQYVILIIAYLLPVIWLS
VKHTGVPVPQAVYGYTLQKVTAKEEQLLKDPKELEVRDLFKARSEAAVAKLKDVPAAMAADKAAAQKRLDDLKAANGAVA
DIRAAEAALAGLPKDEAAARAAYTAARVGNAARSAPPIRHAQPFPGKDEAAQDISRKNFLALVFCLMIGTAALPHILMRY
YTVPSVKEARQSVSWSLFFIFLLYFTAPALAVMAKYEVYTVLVNTPFDSLPGWIARWNAVDPTLLSVVDINKDGILQLAE
ISIGGDIIVLATPEIGGLPYVVSGMVAAGGLAAALSTADGLLLTIANALSHDLYYKVLDPNASTARRVMVSKVLLLVVAL
CAAYVAAQKPADILFLVSAAFSFAAAAFFPALTLGIFWKRANKWGASLGMIAGLGTTFYYMMTTQPWLYKLTHSGAAITP
EILKANTWWDIAPISAGLFGVPLGFAVIIVVSLLTKAPGKDVQELVEHVRYPSLDGKVAAAGAGH

Sequences:

>Translated_705_residues
MGMFGAANQSQSDFKKGLHKVYGWYTGGFIGFVIVLAILEQLGLPKNWIGYLFLAATVLLYAGIGVMSRTSDAAEYYVAG
RRVPAMYNGMATGADWMSAASFIGMAGTLYLTGYGGLAFILGWTGGYCLVALFLAPYLRKFGQFTIPDFLGARYEGNLPR
LIGVFAAILCSFTYVVAQIYGVGLITARLTGLAFEIGIFAGLGGILVCSFLGGMRAVTWTQVAQYVILIIAYLLPVIWLS
VKHTGVPVPQAVYGYTLQKVTAKEEQLLKDPKELEVRDLFKARSEAAVAKLKDVPAAMAADKAAAQKRLDDLKAANGAVA
DIRAAEAALAGLPKDEAAARAAYTAARVGNAARSAPPIRHAQPFPGKDEAAQDISRKNFLALVFCLMIGTAALPHILMRY
YTVPSVKEARQSVSWSLFFIFLLYFTAPALAVMAKYEVYTVLVNTPFDSLPGWIARWNAVDPTLLSVVDINKDGILQLAE
ISIGGDIIVLATPEIGGLPYVVSGMVAAGGLAAALSTADGLLLTIANALSHDLYYKVLDPNASTARRVMVSKVLLLVVAL
CAAYVAAQKPADILFLVSAAFSFAAAAFFPALTLGIFWKRANKWGASLGMIAGLGTTFYYMMTTQPWLYKLTHSGAAITP
EILKANTWWDIAPISAGLFGVPLGFAVIIVVSLLTKAPGKDVQELVEHVRYPSLDGKVAAAGAGH
>Mature_704_residues
GMFGAANQSQSDFKKGLHKVYGWYTGGFIGFVIVLAILEQLGLPKNWIGYLFLAATVLLYAGIGVMSRTSDAAEYYVAGR
RVPAMYNGMATGADWMSAASFIGMAGTLYLTGYGGLAFILGWTGGYCLVALFLAPYLRKFGQFTIPDFLGARYEGNLPRL
IGVFAAILCSFTYVVAQIYGVGLITARLTGLAFEIGIFAGLGGILVCSFLGGMRAVTWTQVAQYVILIIAYLLPVIWLSV
KHTGVPVPQAVYGYTLQKVTAKEEQLLKDPKELEVRDLFKARSEAAVAKLKDVPAAMAADKAAAQKRLDDLKAANGAVAD
IRAAEAALAGLPKDEAAARAAYTAARVGNAARSAPPIRHAQPFPGKDEAAQDISRKNFLALVFCLMIGTAALPHILMRYY
TVPSVKEARQSVSWSLFFIFLLYFTAPALAVMAKYEVYTVLVNTPFDSLPGWIARWNAVDPTLLSVVDINKDGILQLAEI
SIGGDIIVLATPEIGGLPYVVSGMVAAGGLAAALSTADGLLLTIANALSHDLYYKVLDPNASTARRVMVSKVLLLVVALC
AAYVAAQKPADILFLVSAAFSFAAAAFFPALTLGIFWKRANKWGASLGMIAGLGTTFYYMMTTQPWLYKLTHSGAAITPE
ILKANTWWDIAPISAGLFGVPLGFAVIIVVSLLTKAPGKDVQELVEHVRYPSLDGKVAAAGAGH

Specific function: Unknown

COG id: COG4147

COG function: function code R; Predicted symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]

Homologues:

Organism=Escherichia coli, GI1790503, Length=205, Percent_Identity=29.7560975609756, Blast_Score=95, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001734
- InterPro:   IPR019899 [H]

Pfam domain/function: PF00474 SSF [H]

EC number: NA

Molecular weight: Translated: 75244; Mature: 75113

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: PS00018 EF_HAND_1 ; PS00457 NA_SOLUT_SYMP_2 ; PS50283 NA_SOLUT_SYMP_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GMFGAANQSQSDFKKGLHKVYGWYTGGFIGFVIVLAILEQLGLPKNWIGYLFLAATVLL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH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HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1356967 [H]