| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is proP [H]
Identifier: 91789980
GI number: 91789980
Start: 4354251
End: 4355909
Strand: Reverse
Name: proP [H]
Synonym: Bpro_4142
Alternate gene names: 91789980
Gene position: 4355909-4354251 (Counterclockwise)
Preceding gene: 91789982
Following gene: 91789979
Centisome position: 83.76
GC content: 59.43
Gene sequence:
>1659_bases ATGTCAACAGCAGTCGACAACCGACCCATGACAGCTGAGCAGAAGAAAGTGATCTTCGCCTCATCGCTGGGCACCGTATT TGAGTGGTATGACTTTTACCTCTACGGTTCACTCGCCGCCATCATTGCCAAGCAGTTCTTCAGCGGACTGGACGCCGGCT CGGCGTTCATTTTTGCACTGCTGGCATTCGCCGCCGGTTTCATCGTGCGTCCCTTCGGCGCGCTGGTGTTCGGCCGCCTC GGCGACATGATTGGACGCAAGTACACCTTCCTGGTCACCATCGTGATCATGGGCCTGTCGACCTTCATCGTGGGCTTGCT GCCCAGCTATGCCTCCATCGGCGTTGCCGCTCCGGTGATCCTGATCGCATTGCGCATGTTGCAGGGCCTGGCACTCGGTG GCGAGTACGGCGGTGCGGCGGTGTATGTGGCCGAGCATGCGCCGGCACACAAGCGCGGTGCTTATACCTCGTGGATTCAG ACCACGGCAACGCTGGGTCTCTTCCTGTCGCTGATGGTGATTCTGGGCACACGCACCGCCATTGGCGAGGCCGCCTTTGC CGACTGGGGCTGGCGTGTTCCCTTCATCGTCTCGATCCTGTTGCTGGCCGTGTCTGTGTACATCCGCCTGTCCATGAACG AGTCGCCTGCCTTCCAGAAAATGAAGGCAGAGGGCAAGACCTCCAAGGCGCCGCTGTCCGAATCTTTCGGCCAGTGGAAA AACCTGAAGATCGTGATTCTGGCGCTGATCGGTTTGACCGCCGGCCAGGCCGTGGTCTGGTACTCCGGCCAGTTTTATGC GCTGTTCTTCCTGACGCAGGCGCTCAAGGTCGACGGTCCTACCGCCAACGTTCTGGTGGCTTATTCGCTGATCCTGGGCA CGCCGTTTTTCGTCGTGTTCGGCGCGCTGTCTGACAAGATTGGCCGCAAGCCCATCATCATGGCAGGCTGTCTGCTCGCG GTGATTACCTACTTCCCGGTGTTCGGCGCACTGACCAAAGCCGCCAATCCTGATCTGGCTGCAGCACAAGCCAAGAACAA GGTGGTGGTGACTGCAGATACGAAAGAGTGTTCGTTCCAGTTCAACCCGACCGGTACGGCCAAGTTCACCAGCTCCTGCG ACATCGCCAAGCAGGTGCTGGCCGGGGCATCGGTGAGCTATGAAAACGCCGAAGCGCCTGCAGGTACTGTCGCCACCATC AAGATTGGCGAAACCGCCATTCCCAGCTACTCCTCCAAAGGCCTGAGCGCCGACGAAGCCAAGAAGAAGGACGCCGAGTT CAAGAAGGCGGTTGCGGATGACCTGAAGGCCGCCGGCTACCCCAGCAAGGCAGACCCCGCCAAGGTGGATAAGGTCATGG TCACGGCCATCCTGTTCTATCTGGTTCTACTGGTGACCATGGTGTACGGACCGATCGCCGCCATGCTGGTGGAGCTGTTT CCCACCCGTATTCGCTACACGTCCATGAGCCTGCCTTATCACATCGGCAATGGCTGGTTCGGCGGCTTGCTGCCGACCAC CGCCTTCGCCATCGTGGCCCAGACCGGCAACATGTACAACGGCCTGTGGTACCCGATCATCATTGCCGGCGCTACCTTTG TGATCGGCACCCTGTTCATCAGGGAAACCAAGAACGTTGACATCTACGCCAACGACTGA
Upstream 100 bases:
>100_bases AAGCTCCTGTTGGTTTCACGTCAGAGCTGGGTCAGCGGTCAGCAAAATAATGGACTCAGCTTCCACGTCGGAAGCCCTAC TATTTTGGAGACAAACCATC
Downstream 100 bases:
>100_bases CTGATCTTGAGGCGGCGCGGGCCCTGGCTGCCCGTGCTGACCAGAACGATTCCGTAAATTCAAAGGCCTTCGTCATCATC TGCCGGGGGCCTTTTTTTGG
Product: general substrate transporter
Products: betaine [Cytoplasm]; Proton [Cytoplasm]; L-proline [Cytoplasm] [C]
Alternate protein names: Proline porter II; PPII [H]
Number of amino acids: Translated: 552; Mature: 551
Protein sequence:
>552_residues MSTAVDNRPMTAEQKKVIFASSLGTVFEWYDFYLYGSLAAIIAKQFFSGLDAGSAFIFALLAFAAGFIVRPFGALVFGRL GDMIGRKYTFLVTIVIMGLSTFIVGLLPSYASIGVAAPVILIALRMLQGLALGGEYGGAAVYVAEHAPAHKRGAYTSWIQ TTATLGLFLSLMVILGTRTAIGEAAFADWGWRVPFIVSILLLAVSVYIRLSMNESPAFQKMKAEGKTSKAPLSESFGQWK NLKIVILALIGLTAGQAVVWYSGQFYALFFLTQALKVDGPTANVLVAYSLILGTPFFVVFGALSDKIGRKPIIMAGCLLA VITYFPVFGALTKAANPDLAAAQAKNKVVVTADTKECSFQFNPTGTAKFTSSCDIAKQVLAGASVSYENAEAPAGTVATI KIGETAIPSYSSKGLSADEAKKKDAEFKKAVADDLKAAGYPSKADPAKVDKVMVTAILFYLVLLVTMVYGPIAAMLVELF PTRIRYTSMSLPYHIGNGWFGGLLPTTAFAIVAQTGNMYNGLWYPIIIAGATFVIGTLFIRETKNVDIYAND
Sequences:
>Translated_552_residues MSTAVDNRPMTAEQKKVIFASSLGTVFEWYDFYLYGSLAAIIAKQFFSGLDAGSAFIFALLAFAAGFIVRPFGALVFGRL GDMIGRKYTFLVTIVIMGLSTFIVGLLPSYASIGVAAPVILIALRMLQGLALGGEYGGAAVYVAEHAPAHKRGAYTSWIQ TTATLGLFLSLMVILGTRTAIGEAAFADWGWRVPFIVSILLLAVSVYIRLSMNESPAFQKMKAEGKTSKAPLSESFGQWK NLKIVILALIGLTAGQAVVWYSGQFYALFFLTQALKVDGPTANVLVAYSLILGTPFFVVFGALSDKIGRKPIIMAGCLLA VITYFPVFGALTKAANPDLAAAQAKNKVVVTADTKECSFQFNPTGTAKFTSSCDIAKQVLAGASVSYENAEAPAGTVATI KIGETAIPSYSSKGLSADEAKKKDAEFKKAVADDLKAAGYPSKADPAKVDKVMVTAILFYLVLLVTMVYGPIAAMLVELF PTRIRYTSMSLPYHIGNGWFGGLLPTTAFAIVAQTGNMYNGLWYPIIIAGATFVIGTLFIRETKNVDIYAND >Mature_551_residues STAVDNRPMTAEQKKVIFASSLGTVFEWYDFYLYGSLAAIIAKQFFSGLDAGSAFIFALLAFAAGFIVRPFGALVFGRLG DMIGRKYTFLVTIVIMGLSTFIVGLLPSYASIGVAAPVILIALRMLQGLALGGEYGGAAVYVAEHAPAHKRGAYTSWIQT TATLGLFLSLMVILGTRTAIGEAAFADWGWRVPFIVSILLLAVSVYIRLSMNESPAFQKMKAEGKTSKAPLSESFGQWKN LKIVILALIGLTAGQAVVWYSGQFYALFFLTQALKVDGPTANVLVAYSLILGTPFFVVFGALSDKIGRKPIIMAGCLLAV ITYFPVFGALTKAANPDLAAAQAKNKVVVTADTKECSFQFNPTGTAKFTSSCDIAKQVLAGASVSYENAEAPAGTVATIK IGETAIPSYSSKGLSADEAKKKDAEFKKAVADDLKAAGYPSKADPAKVDKVMVTAILFYLVLLVTMVYGPIAAMLVELFP TRIRYTSMSLPYHIGNGWFGGLLPTTAFAIVAQTGNMYNGLWYPIIIAGATFVIGTLFIRETKNVDIYAND
Specific function: Proton symporter that senses osmotic shifts and responds by importing osmolytes such as proline, glycine betaine, stachydrine, pipecolic acid, ectoine and taurine. It is both an osmosensor and an osmoregulator which is available to participate early in th
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1790550, Length=326, Percent_Identity=37.7300613496933, Blast_Score=216, Evalue=4e-57, Organism=Escherichia coli, GI1788292, Length=349, Percent_Identity=31.5186246418338, Blast_Score=180, Evalue=2e-46, Organism=Escherichia coli, GI1789941, Length=335, Percent_Identity=35.8208955223881, Blast_Score=158, Evalue=1e-39, Organism=Escherichia coli, GI1788942, Length=335, Percent_Identity=30.7462686567164, Blast_Score=156, Evalue=3e-39, Organism=Escherichia coli, GI87082231, Length=236, Percent_Identity=26.271186440678, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI87082404, Length=222, Percent_Identity=26.1261261261261, Blast_Score=69, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6323653, Length=164, Percent_Identity=29.2682926829268, Blast_Score=64, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004736 - InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR015041 - InterPro: IPR005828 - InterPro: IPR005829 [H]
Pfam domain/function: PF08946 Osmo_CC; PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 59005; Mature: 58874
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTAVDNRPMTAEQKKVIFASSLGTVFEWYDFYLYGSLAAIIAKQFFSGLDAGSAFIFAL CCCCCCCCCCCCHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH LAFAAGFIVRPFGALVFGRLGDMIGRKYTFLVTIVIMGLSTFIVGLLPSYASIGVAAPVI HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIALRMLQGLALGGEYGGAAVYVAEHAPAHKRGAYTSWIQTTATLGLFLSLMVILGTRTA HHHHHHHHHHCCCCCCCCEEEEEECCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHH IGEAAFADWGWRVPFIVSILLLAVSVYIRLSMNESPAFQKMKAEGKTSKAPLSESFGQWK HCCHHHHCCCCCHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHCCCCCCCCCHHHHCCCC NLKIVILALIGLTAGQAVVWYSGQFYALFFLTQALKVDGPTANVLVAYSLILGTPFFVVF CHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHH GALSDKIGRKPIIMAGCLLAVITYFPVFGALTKAANPDLAAAQAKNKVVVTADTKECSFQ HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEEECCCCCEEE FNPTGTAKFTSSCDIAKQVLAGASVSYENAEAPAGTVATIKIGETAIPSYSSKGLSADEA ECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHH KKKDAEFKKAVADDLKAAGYPSKADPAKVDKVMVTAILFYLVLLVTMVYGPIAAMLVELF HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PTRIRYTSMSLPYHIGNGWFGGLLPTTAFAIVAQTGNMYNGLWYPIIIAGATFVIGTLFI HHHHEEEEECCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH RETKNVDIYAND EECCCEEEEECC >Mature Secondary Structure STAVDNRPMTAEQKKVIFASSLGTVFEWYDFYLYGSLAAIIAKQFFSGLDAGSAFIFAL CCCCCCCCCCCHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH LAFAAGFIVRPFGALVFGRLGDMIGRKYTFLVTIVIMGLSTFIVGLLPSYASIGVAAPVI HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIALRMLQGLALGGEYGGAAVYVAEHAPAHKRGAYTSWIQTTATLGLFLSLMVILGTRTA HHHHHHHHHHCCCCCCCCEEEEEECCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHH IGEAAFADWGWRVPFIVSILLLAVSVYIRLSMNESPAFQKMKAEGKTSKAPLSESFGQWK HCCHHHHCCCCCHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHCCCCCCCCCHHHHCCCC NLKIVILALIGLTAGQAVVWYSGQFYALFFLTQALKVDGPTANVLVAYSLILGTPFFVVF CHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHH GALSDKIGRKPIIMAGCLLAVITYFPVFGALTKAANPDLAAAQAKNKVVVTADTKECSFQ HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEEECCCCCEEE FNPTGTAKFTSSCDIAKQVLAGASVSYENAEAPAGTVATIKIGETAIPSYSSKGLSADEA ECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHH KKKDAEFKKAVADDLKAAGYPSKADPAKVDKVMVTAILFYLVLLVTMVYGPIAAMLVELF HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PTRIRYTSMSLPYHIGNGWFGGLLPTTAFAIVAQTGNMYNGLWYPIIIAGATFVIGTLFI HHHHEEEEECCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH RETKNVDIYAND EECCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: betaine [Periplasm]; Proton [Periplasm]; L-proline [Periplasm] [C]
Specific reaction: Proton [Periplasm] + betaine [Periplasm] = Proton [Cytoplasm] + betaine [Cytoplasm] Proton [Periplasm] + L-proline [Periplasm] = Proton [Cytoplasm] + L-proline [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]