| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is livK [H]
Identifier: 91789978
GI number: 91789978
Start: 4352091
End: 4353203
Strand: Direct
Name: livK [H]
Synonym: Bpro_4140
Alternate gene names: 91789978
Gene position: 4352091-4353203 (Clockwise)
Preceding gene: 91789975
Following gene: 91789981
Centisome position: 83.69
GC content: 61.1
Gene sequence:
>1113_bases ATGAAAAAACTGAATTTATGGTGCGGCGCCATCGTGCTGATGGCCTTGGGTCACGCCAGCCAGGCGCAAATCCTGATCGG ACAGACCGCCGGGTTTACCGGCGCGGTGGGCGCAGGTGTCAAGGAAACCACAGAAGGCGCCAAGCTTTACATTGACACCA TCAACGCCAAGGGCGGTGTCAACGGCCAGAAGATTGAGCTGGTCTCGCTCGACGACAAGTTCGACCCCAAGCTGGCGGCC GAAAACGCGCGCAAGCTGATAGAAGAGCAGAACGTGGTGGCAATGTTCCTGACGCGCGGCACGCCCCACACGGAAGGCAT CATTCCCATCCTTGAAAAAAATGGCGTGCCGCTGATAGGCCCGTCCACCGGTGCCATGGTGCTGCACCAGCCCGTCAAGA AGCATGTCTTCAATGTGCGCGCCACCTACCAGCGCGAAGCCGAAAAGGCCATCACCCATCTGCATTCCATGGGCATCACG CGGATCGGCATTGTCTACGCGGACGACAGCTTCGGCGCCGATGGCGTGGCCGGCGCGCAAAAAGGCCTGACGACGGCCAA GCTGCAGCCCGTTGTGCTGGAAAAATTCAACCGCGCCAAGCCCGACTTCGGGCCGATTGCTCCCAAGGTTTTTCAGTCCA ATGCGCAGGCCATCATGATGGTGGCCTCCGGCCAGGCGGTGGTGGATGGCGTCAAGGCCTTCCGCGCGGCGGGCTCTGCG GCACAGATTGTGACGCTGTCCAACAATGCCTCCAGCGGTTTTGTGAAGAGCCTGGGCGAGAACGCGCGGGGCGTGATCGT CACGCAGGTCTTTCCCTACGAGCGCTCCATTGCCTTCCCCATGGTCAGGGAAGCCCAGGAAATGGCCAAGGCGAAGGGAC AGGGCGAAATCACTCCGGCCATGCTGGAGGGCTTTGCCGCGGCCAAGGTGCTGGTGGAAGGCCTGCGCCGGGCCGGCGCC AAACCCACCCGCGAAAAAATCCAGGCAGCCCTGGAAGGTCTTCGCAAACTGGATATTGGCGGACTGGAAGTGAACTACAG CGCAGAGGACCACACCGGGCTTGATTTCGCCGATCTGTCCATCATCGGGACCGACGGGAAATTCAAGCGCTGA
Upstream 100 bases:
>100_bases GCTCCTGCCCATGATTTCCTGTTCGTGGTTTCCTGTTCGTGATTTCCCCACTTCCTTATTCAGCGGGGATGCGTAAACTG AACTCCACCAGGAGCAAAAC
Downstream 100 bases:
>100_bases GGTGAACGCCCCGGCATCATGTCGAGACGGGGCCCTGTCATGCCCGGAGCACGGTAGCGCCACTCGCCGTCGCGGCCTCA GTCATACAGGGCGCGCTCCA
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: L-BP; LS-BP [H]
Number of amino acids: Translated: 370; Mature: 370
Protein sequence:
>370_residues MKKLNLWCGAIVLMALGHASQAQILIGQTAGFTGAVGAGVKETTEGAKLYIDTINAKGGVNGQKIELVSLDDKFDPKLAA ENARKLIEEQNVVAMFLTRGTPHTEGIIPILEKNGVPLIGPSTGAMVLHQPVKKHVFNVRATYQREAEKAITHLHSMGIT RIGIVYADDSFGADGVAGAQKGLTTAKLQPVVLEKFNRAKPDFGPIAPKVFQSNAQAIMMVASGQAVVDGVKAFRAAGSA AQIVTLSNNASSGFVKSLGENARGVIVTQVFPYERSIAFPMVREAQEMAKAKGQGEITPAMLEGFAAAKVLVEGLRRAGA KPTREKIQAALEGLRKLDIGGLEVNYSAEDHTGLDFADLSIIGTDGKFKR
Sequences:
>Translated_370_residues MKKLNLWCGAIVLMALGHASQAQILIGQTAGFTGAVGAGVKETTEGAKLYIDTINAKGGVNGQKIELVSLDDKFDPKLAA ENARKLIEEQNVVAMFLTRGTPHTEGIIPILEKNGVPLIGPSTGAMVLHQPVKKHVFNVRATYQREAEKAITHLHSMGIT RIGIVYADDSFGADGVAGAQKGLTTAKLQPVVLEKFNRAKPDFGPIAPKVFQSNAQAIMMVASGQAVVDGVKAFRAAGSA AQIVTLSNNASSGFVKSLGENARGVIVTQVFPYERSIAFPMVREAQEMAKAKGQGEITPAMLEGFAAAKVLVEGLRRAGA KPTREKIQAALEGLRKLDIGGLEVNYSAEDHTGLDFADLSIIGTDGKFKR >Mature_370_residues MKKLNLWCGAIVLMALGHASQAQILIGQTAGFTGAVGAGVKETTEGAKLYIDTINAKGGVNGQKIELVSLDDKFDPKLAA ENARKLIEEQNVVAMFLTRGTPHTEGIIPILEKNGVPLIGPSTGAMVLHQPVKKHVFNVRATYQREAEKAITHLHSMGIT RIGIVYADDSFGADGVAGAQKGLTTAKLQPVVLEKFNRAKPDFGPIAPKVFQSNAQAIMMVASGQAVVDGVKAFRAAGSA AQIVTLSNNASSGFVKSLGENARGVIVTQVFPYERSIAFPMVREAQEMAKAKGQGEITPAMLEGFAAAKVLVEGLRRAGA KPTREKIQAALEGLRKLDIGGLEVNYSAEDHTGLDFADLSIIGTDGKFKR
Specific function: This protein is a component of the leucine-specific transport system, which is one of the two periplasmic binding protein-dependent transport systems of the high-affinity transport of the branched-chain amino acids in E.coli [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1789867, Length=315, Percent_Identity=22.2222222222222, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI48994941, Length=317, Percent_Identity=23.3438485804416, Blast_Score=65, Evalue=6e-12,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 39186; Mature: 39186
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLNLWCGAIVLMALGHASQAQILIGQTAGFTGAVGAGVKETTEGAKLYIDTINAKGGV CCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCC NGQKIELVSLDDKFDPKLAAENARKLIEEQNVVAMFLTRGTPHTEGIIPILEKNGVPLIG CCCEEEEEECCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCEEEEECCCCEEEC PSTGAMVLHQPVKKHVFNVRATYQREAEKAITHLHSMGITRIGIVYADDSFGADGVAGAQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCHHH KGLTTAKLQPVVLEKFNRAKPDFGPIAPKVFQSNAQAIMMVASGQAVVDGVKAFRAAGSA CCCCHHHCCHHHHHHHCCCCCCCCCCCHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCC AQIVTLSNNASSGFVKSLGENARGVIVTQVFPYERSIAFPMVREAQEMAKAKGQGEITPA EEEEEECCCCCCHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCHH MLEGFAAAKVLVEGLRRAGAKPTREKIQAALEGLRKLDIGGLEVNYSAEDHTGLDFADLS HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEE IIGTDGKFKR EEECCCCCCC >Mature Secondary Structure MKKLNLWCGAIVLMALGHASQAQILIGQTAGFTGAVGAGVKETTEGAKLYIDTINAKGGV CCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCC NGQKIELVSLDDKFDPKLAAENARKLIEEQNVVAMFLTRGTPHTEGIIPILEKNGVPLIG CCCEEEEEECCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCEEEEECCCCEEEC PSTGAMVLHQPVKKHVFNVRATYQREAEKAITHLHSMGITRIGIVYADDSFGADGVAGAQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCHHH KGLTTAKLQPVVLEKFNRAKPDFGPIAPKVFQSNAQAIMMVASGQAVVDGVKAFRAAGSA CCCCHHHCCHHHHHHHCCCCCCCCCCCHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCC AQIVTLSNNASSGFVKSLGENARGVIVTQVFPYERSIAFPMVREAQEMAKAKGQGEITPA EEEEEECCCCCCHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCHH MLEGFAAAKVLVEGLRRAGAKPTREKIQAALEGLRKLDIGGLEVNYSAEDHTGLDFADLS HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEE IIGTDGKFKR EEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3891753; 4077929; 2195019; 8041620; 9278503; 6990419; 9298646; 2649683 [H]