| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789981
Identifier: 91789981
GI number: 91789981
Start: 4356194
End: 4356694
Strand: Direct
Name: 91789981
Synonym: Bpro_4143
Alternate gene names: NA
Gene position: 4356194-4356694 (Clockwise)
Preceding gene: 91789978
Following gene: 91789986
Centisome position: 83.77
GC content: 60.28
Gene sequence:
>501_bases ATGTCCGAACTCCAGGCAAGCACCGTATTGCGCAAGACCGAAGCCGGCATCAACGGCATCAAGCAAAGGGACCCGCGGCT AAGCCCAAAGCTGCGCATGTCGCTGATTTTGGTGGACGGTACGAAGTCCGTCGCGGAGCTGCTCAAATCTTTGCCCAACC CGGAGGAAGTCATGCAGATGCTGACGCAGTTGCTGGGCGTCGGCTTTGTCTCCATCGTTGACGCGCCCCAGGCTGCGCCC AAGCCGGCGCTGGCACCCACTCAACCCGCCAAGGCCAAAGACAATGAACCGGATGCCGCCGACCTGACGGCGGCGATGCG GCGTGCAACACACTTGCTGGACGTTATGCTTGGACCGGATTCCGAGGTCCTCTGCCTGCAGATCGAGCGCTGCACCTCCA GCGTGCAATTGAACGTCAAAATCATTGAGATCTCGCGCATCGTCGCGGCCATGCGCTCAGAGAAAAAAGCCGCAGAGTTC TTGCTCGCCGCCACCTCATAG
Upstream 100 bases:
>100_bases CAGGAAGTCCGCACGGATAAAATGAAACGAAAGCAGAATGCCCGCTTTTCTCTCAGATGCCGATCGGGTACTTCATGCAA ATTCAAGGAGACAGTCACCC
Downstream 100 bases:
>100_bases CCCCAATACCGTTCAGTTAAGCCCTTGCCCCTGGTTTGTCATCCCGGACTTGATCCGGGATCCATGGATTGCGGGTCAAG CCCGCAATGACAAGTCAACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MSELQASTVLRKTEAGINGIKQRDPRLSPKLRMSLILVDGTKSVAELLKSLPNPEEVMQMLTQLLGVGFVSIVDAPQAAP KPALAPTQPAKAKDNEPDAADLTAAMRRATHLLDVMLGPDSEVLCLQIERCTSSVQLNVKIIEISRIVAAMRSEKKAAEF LLAATS
Sequences:
>Translated_166_residues MSELQASTVLRKTEAGINGIKQRDPRLSPKLRMSLILVDGTKSVAELLKSLPNPEEVMQMLTQLLGVGFVSIVDAPQAAP KPALAPTQPAKAKDNEPDAADLTAAMRRATHLLDVMLGPDSEVLCLQIERCTSSVQLNVKIIEISRIVAAMRSEKKAAEF LLAATS >Mature_165_residues SELQASTVLRKTEAGINGIKQRDPRLSPKLRMSLILVDGTKSVAELLKSLPNPEEVMQMLTQLLGVGFVSIVDAPQAAPK PALAPTQPAKAKDNEPDAADLTAAMRRATHLLDVMLGPDSEVLCLQIERCTSSVQLNVKIIEISRIVAAMRSEKKAAEFL LAATS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17855; Mature: 17724
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELQASTVLRKTEAGINGIKQRDPRLSPKLRMSLILVDGTKSVAELLKSLPNPEEVMQM CCCHHHHHHHHHHHHCCCCHHHCCCCCCCCEEEEEEEEECCHHHHHHHHHCCCHHHHHHH LTQLLGVGFVSIVDAPQAAPKPALAPTQPAKAKDNEPDAADLTAAMRRATHLLDVMLGPD HHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC SEVLCLQIERCTSSVQLNVKIIEISRIVAAMRSEKKAAEFLLAATS CCEEEEEEECCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SELQASTVLRKTEAGINGIKQRDPRLSPKLRMSLILVDGTKSVAELLKSLPNPEEVMQM CCHHHHHHHHHHHHCCCCHHHCCCCCCCCEEEEEEEEECCHHHHHHHHHCCCHHHHHHH LTQLLGVGFVSIVDAPQAAPKPALAPTQPAKAKDNEPDAADLTAAMRRATHLLDVMLGPD HHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC SEVLCLQIERCTSSVQLNVKIIEISRIVAAMRSEKKAAEFLLAATS CCEEEEEEECCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA