| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789975
Identifier: 91789975
GI number: 91789975
Start: 4342416
End: 4343756
Strand: Direct
Name: 91789975
Synonym: Bpro_4136
Alternate gene names: NA
Gene position: 4342416-4343756 (Clockwise)
Preceding gene: 91789974
Following gene: 91789978
Centisome position: 83.5
GC content: 60.55
Gene sequence:
>1341_bases ATGGCAATGAAGGCACGCAAGCCCGAATGGACGATCACGCACCCTGATGCCGCAGGCATTGACGTAGGGTCGGCGTCGCA TTTTGTGGCGATTCCCCCGCAGCGCCAAGAGCAAACGGTGCGCGAGTTTGGCTGTCACACGGCCGATCTTGGTCAACTGG CCGACTGGCTGGTAGCCAGCGGCGTCAAGACCGTTGCGGTGGAATCTACGGGGGTGTACTGGGTCGGGCTGTATGAGGTG CTGCAGGCGCGTGGACTGGACGTGTGGCTGGTCAATGCCAAGAGCGTGCGCCACGTCAGCGGGCGCAAGTCTGATGTACT CGATTGCCAATGGCTGCAGCAGCTGCACACCTTTGGCCTATTGCAGCGCGCGTTTCGCCCGACCTCGGCGGTGTGTGGTT TGCGCGAGATCGTGCGCTTGCGCCAGACCCAGTTGCAAGAGCGTGCGCGCCATGTGCAGCGCATGCAAAAGGCACTGACA CAGATGAATTTGCAACTCACCAATGTGCTCAGCGATATCGTGGGCAACAGCGGCCTGGCCATCTTGAGAGCCATCGTGCA AGGCGAGCGCGATACGTACAAGCTGGCGGCCTTGTGCAACTACCGGGTTCGGGCCAGTCGGGACGAGGTCGCCAAGAGTT TGGAAGGCACTTGGGCTTTCGAGCACCTACTGTGCTTGAAGCTTGAATTAGCGGCCTTCGAGCACGCCAGCGCACAACTG GGTGAGATTGATGAGCACATTCAGACCCTGCTCAAAGGCTTTGCCGTGCATGAGCGAGAGGCCAAAGCCGACCCGAACAA AGGACGTGGCAAGAATGCGCCCAGGTTTAATCTGCGCACGGCGCTGCTCAATTGGAGTGGCGTGGACTTGACGGCCGTGC CCGGCATTGACGCGACCACAGCCATGAATGTGCTGTGCGAGTTGGGCTGCACGCTGCACGAGTTTGCCACTGCAGGGCAT TTCTGTTCATGGCTGGGCTTGTGCCCGGGCACGCGCATCACGGGCGGCAAGCGCCTGTCCGGCGCCACCAAGCGAGTGCC CAATCGGGTCAGCTTGGCGCTCAAGCTGGCCGCGCAAGGGCTGACACGCGCCCACTGCGCATTGGGCGGGTATTACCGAC GCATGGCGCTACGCATGGGCACAGCCAAAGCCATCACAGCAGTGGCTCACAAACTGGCACGCATCATTTACGCCATGCTC ACCAAGAGCCAAGAATTTGTTGAGACTGATCAATCGGCGTACGAGCAACGCAGCCAAGCCAAGAGGCTCAAGACCGTTCA GCGCCAAGCTGCACAAATGGGCTTCGACCTTGTCCCAAAGACCTGCCCCATCGCCGTTTGA
Upstream 100 bases:
>100_bases GCATTGTGGTGATGTGCCCGTATCCCGATTGAGAGACTGAGCTTTACGACATGTCCATGCCCCAGAAGCTTTCACGGTAA CTCAACGGTGAAGGACTTTT
Downstream 100 bases:
>100_bases GCCTCAAAGCACCGCCAACACAAATACGCTAACCTATTGAATAAAAAAGAGATTCTTAGCTGTTTCTTGAGAGCCTGTCG AAGGACATTCCCATGCCCCA
Product: transposase
Products: NA
Alternate protein names: ISPpu9 Transposase; LOW QUALITY PROTEIN Transposase; Transposase And Inactivated Derivatives; Pyruvate Water Dikinase; ISAfe3 Transposase; Phosphoenolpyruvate Synthase; Transposase For Insertion Sequences
Number of amino acids: Translated: 446; Mature: 445
Protein sequence:
>446_residues MAMKARKPEWTITHPDAAGIDVGSASHFVAIPPQRQEQTVREFGCHTADLGQLADWLVASGVKTVAVESTGVYWVGLYEV LQARGLDVWLVNAKSVRHVSGRKSDVLDCQWLQQLHTFGLLQRAFRPTSAVCGLREIVRLRQTQLQERARHVQRMQKALT QMNLQLTNVLSDIVGNSGLAILRAIVQGERDTYKLAALCNYRVRASRDEVAKSLEGTWAFEHLLCLKLELAAFEHASAQL GEIDEHIQTLLKGFAVHEREAKADPNKGRGKNAPRFNLRTALLNWSGVDLTAVPGIDATTAMNVLCELGCTLHEFATAGH FCSWLGLCPGTRITGGKRLSGATKRVPNRVSLALKLAAQGLTRAHCALGGYYRRMALRMGTAKAITAVAHKLARIIYAML TKSQEFVETDQSAYEQRSQAKRLKTVQRQAAQMGFDLVPKTCPIAV
Sequences:
>Translated_446_residues MAMKARKPEWTITHPDAAGIDVGSASHFVAIPPQRQEQTVREFGCHTADLGQLADWLVASGVKTVAVESTGVYWVGLYEV LQARGLDVWLVNAKSVRHVSGRKSDVLDCQWLQQLHTFGLLQRAFRPTSAVCGLREIVRLRQTQLQERARHVQRMQKALT QMNLQLTNVLSDIVGNSGLAILRAIVQGERDTYKLAALCNYRVRASRDEVAKSLEGTWAFEHLLCLKLELAAFEHASAQL GEIDEHIQTLLKGFAVHEREAKADPNKGRGKNAPRFNLRTALLNWSGVDLTAVPGIDATTAMNVLCELGCTLHEFATAGH FCSWLGLCPGTRITGGKRLSGATKRVPNRVSLALKLAAQGLTRAHCALGGYYRRMALRMGTAKAITAVAHKLARIIYAML TKSQEFVETDQSAYEQRSQAKRLKTVQRQAAQMGFDLVPKTCPIAV >Mature_445_residues AMKARKPEWTITHPDAAGIDVGSASHFVAIPPQRQEQTVREFGCHTADLGQLADWLVASGVKTVAVESTGVYWVGLYEVL QARGLDVWLVNAKSVRHVSGRKSDVLDCQWLQQLHTFGLLQRAFRPTSAVCGLREIVRLRQTQLQERARHVQRMQKALTQ MNLQLTNVLSDIVGNSGLAILRAIVQGERDTYKLAALCNYRVRASRDEVAKSLEGTWAFEHLLCLKLELAAFEHASAQLG EIDEHIQTLLKGFAVHEREAKADPNKGRGKNAPRFNLRTALLNWSGVDLTAVPGIDATTAMNVLCELGCTLHEFATAGHF CSWLGLCPGTRITGGKRLSGATKRVPNRVSLALKLAAQGLTRAHCALGGYYRRMALRMGTAKAITAVAHKLARIIYAMLT KSQEFVETDQSAYEQRSQAKRLKTVQRQAAQMGFDLVPKTCPIAV
Specific function: Unknown
COG id: COG3547
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49182; Mature: 49051
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMKARKPEWTITHPDAAGIDVGSASHFVAIPPQRQEQTVREFGCHTADLGQLADWLVAS CCCCCCCCCEEEECCCCCCCCCCCCCCEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHC GVKTVAVESTGVYWVGLYEVLQARGLDVWLVNAKSVRHVSGRKSDVLDCQWLQQLHTFGL CCCEEEEECCCEEEHHHHHHHHHCCCCEEEECCCHHHHHCCCCCCCCCHHHHHHHHHHHH LQRAFRPTSAVCGLREIVRLRQTQLQERARHVQRMQKALTQMNLQLTNVLSDIVGNSGLA HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH ILRAIVQGERDTYKLAALCNYRVRASRDEVAKSLEGTWAFEHLLCLKLELAAFEHASAQL HHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH GEIDEHIQTLLKGFAVHEREAKADPNKGRGKNAPRFNLRTALLNWSGVDLTAVPGIDATT HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHEECCCCCCEEECCCCCHHH AMNVLCELGCTLHEFATAGHFCSWLGLCPGTRITGGKRLSGATKRVPNRVSLALKLAAQG HHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHH LTRAHCALGGYYRRMALRMGTAKAITAVAHKLARIIYAMLTKSQEFVETDQSAYEQRSQA HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH KRLKTVQRQAAQMGFDLVPKTCPIAV HHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure AMKARKPEWTITHPDAAGIDVGSASHFVAIPPQRQEQTVREFGCHTADLGQLADWLVAS CCCCCCCCEEEECCCCCCCCCCCCCCEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHC GVKTVAVESTGVYWVGLYEVLQARGLDVWLVNAKSVRHVSGRKSDVLDCQWLQQLHTFGL CCCEEEEECCCEEEHHHHHHHHHCCCCEEEECCCHHHHHCCCCCCCCCHHHHHHHHHHHH LQRAFRPTSAVCGLREIVRLRQTQLQERARHVQRMQKALTQMNLQLTNVLSDIVGNSGLA HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH ILRAIVQGERDTYKLAALCNYRVRASRDEVAKSLEGTWAFEHLLCLKLELAAFEHASAQL HHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH GEIDEHIQTLLKGFAVHEREAKADPNKGRGKNAPRFNLRTALLNWSGVDLTAVPGIDATT HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHEECCCCCCEEECCCCCHHH AMNVLCELGCTLHEFATAGHFCSWLGLCPGTRITGGKRLSGATKRVPNRVSLALKLAAQG HHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHH LTRAHCALGGYYRRMALRMGTAKAITAVAHKLARIIYAMLTKSQEFVETDQSAYEQRSQA HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH KRLKTVQRQAAQMGFDLVPKTCPIAV HHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA