| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789974
Identifier: 91789974
GI number: 91789974
Start: 4341555
End: 4342139
Strand: Direct
Name: 91789974
Synonym: Bpro_4135
Alternate gene names: NA
Gene position: 4341555-4342139 (Clockwise)
Preceding gene: 91789972
Following gene: 91789975
Centisome position: 83.49
GC content: 67.69
Gene sequence:
>585_bases ATGAACACCCCCATGACGCCCCAGATCAAACGCCCCGGCGGCCGCAGCGCGCAGGTGCAGTCCGTGGTGCGAAAAGCGCT GGAAGAACTGATTGCCGAGGAAGGCCGCGACAAGGTCACCGTGCCGGCCGTGGCCGAGCGCGCCGGCGTCAGCGCCTCCA GCATTTACAGGCGCTGGGGCGACGTGAACGGCCTGCTGGGCGAAACCGCGACCGAGCGGCTGGACCCGAACCGCCCGCTG CCCGAGACAGGCAACCTGAAAGCCGAACTCGCGGCCTGGGCCCGGGGGCTGATCACCCACCTCAACAAGCCCGGCAACAC CTCGATGCTGAAGGCGGCGGCCGCGCTGGCCGGATCGGAAGAGACCAACTGCCTGAAAAACCGCCGCGCCGAAGCCACCG TGCTGGTGAACCGGGCCCAGGCGCGCGGCGACGCCACACCCAGCGTGCAGCAGGTACTGGACCACATGATGGCCCCCATC ATTTACCGGCTGATTTTTGGCTCCGGCGTGGAGCCTGCGCTTGCCGACCAGCTGGCCGACGAGCTGTTTGCAATGGCCGG CATCACACATACCCGTTCGTCCTGA
Upstream 100 bases:
>100_bases AAACGCTCGACTTTCTTAAAGCAAATTTATTTGCGTTTGTGAATTCTACGCCCAGTTTTAAATTAACGCAAATATCATTG CTTTAAGCTAGAATCAGCGC
Downstream 100 bases:
>100_bases GCAAGATATTCGTCCGCGGGCCGAAAGGCGTTTGGAAGAAACAGCGGGCGCGCGAAGGTGCTAGTGTGCGTGGCGTGGAG TCTCTGGGATCAAGACCGAT
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator; Transcriptional Regulator TetR Family; Regulatory Protein TetR; TetR-Family Transcriptional Regulator; TetR Family Receptor Protein; HTH-Type Transcriptional Regulator; Transcriptional Regulator Protein TetR Family; Transcriptional Regulator TetR Family Protein; TetR-Family Transcriptional Regulartory; Transcriptional Regulator Protein; TetR-Family Protein Transcriptional Regulator; TetR Family Regulatory Protein; Transcriptional Regulator TetR
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MNTPMTPQIKRPGGRSAQVQSVVRKALEELIAEEGRDKVTVPAVAERAGVSASSIYRRWGDVNGLLGETATERLDPNRPL PETGNLKAELAAWARGLITHLNKPGNTSMLKAAAALAGSEETNCLKNRRAEATVLVNRAQARGDATPSVQQVLDHMMAPI IYRLIFGSGVEPALADQLADELFAMAGITHTRSS
Sequences:
>Translated_194_residues MNTPMTPQIKRPGGRSAQVQSVVRKALEELIAEEGRDKVTVPAVAERAGVSASSIYRRWGDVNGLLGETATERLDPNRPL PETGNLKAELAAWARGLITHLNKPGNTSMLKAAAALAGSEETNCLKNRRAEATVLVNRAQARGDATPSVQQVLDHMMAPI IYRLIFGSGVEPALADQLADELFAMAGITHTRSS >Mature_194_residues MNTPMTPQIKRPGGRSAQVQSVVRKALEELIAEEGRDKVTVPAVAERAGVSASSIYRRWGDVNGLLGETATERLDPNRPL PETGNLKAELAAWARGLITHLNKPGNTSMLKAAAALAGSEETNCLKNRRAEATVLVNRAQARGDATPSVQQVLDHMMAPI IYRLIFGSGVEPALADQLADELFAMAGITHTRSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20777; Mature: 20777
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTPMTPQIKRPGGRSAQVQSVVRKALEELIAEEGRDKVTVPAVAERAGVSASSIYRRWG CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHH DVNGLLGETATERLDPNRPLPETGNLKAELAAWARGLITHLNKPGNTSMLKAAAALAGSE CCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC ETNCLKNRRAEATVLVNRAQARGDATPSVQQVLDHMMAPIIYRLIFGSGVEPALADQLAD HHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH ELFAMAGITHTRSS HHHHHHHCHHCCCC >Mature Secondary Structure MNTPMTPQIKRPGGRSAQVQSVVRKALEELIAEEGRDKVTVPAVAERAGVSASSIYRRWG CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHH DVNGLLGETATERLDPNRPLPETGNLKAELAAWARGLITHLNKPGNTSMLKAAAALAGSE CCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC ETNCLKNRRAEATVLVNRAQARGDATPSVQQVLDHMMAPIIYRLIFGSGVEPALADQLAD HHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH ELFAMAGITHTRSS HHHHHHHCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA