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The map label for this gene is rlpA [C]

Identifier: 91789968

GI number: 91789968

Start: 4334743

End: 4335384

Strand: Reverse

Name: rlpA [C]

Synonym: Bpro_4129

Alternate gene names: 91789968

Gene position: 4335384-4334743 (Counterclockwise)

Preceding gene: 91789969

Following gene: 91789967

Centisome position: 83.37

GC content: 71.5

Gene sequence:

>642_bases
ATGGCATGCAACACTGCACCAGGTAAGCCTGTGCACCAGGGCGCTGTCAGGGTCTGGATTGTTGCAAGCCTGCTGGCCGT
GCTGGCGGGCTGTGCGACAGCCCCGCCGGTGCAGCCGCCGTCCGGCTTTCCACCCGGCCCGGCCACCAAGCCTGCGGTCA
CTGCTCCGACGGCACCGGCAGATCCGATGGGGGGTCCCGCGCCGGCCAACCCGTCCGTGGCGGCCGAGCCGGAGTTGCTG
GCCGGCGAGGTACCCCGCGAACTCGAGCGCGGCCAGGCATCGTGGTACGGGCCCCGCTTTCATGGCCGGCGCACGGCCAG
CGGTGAACGCTACGACATGCATGCGCTGACGGCAGCCCACAAGACCCTGCCCTTCGGCACGCTGGTGCGCGTGCGCAGCC
TCGTGACGGGACGCGAGGTCGAGGTGCGCATCAACGACCGCGGCCCCTTCGGCGCGGGCCGGGTCATCGATGTGAGCCGC
GCCGCGGCCGAGGCCCTGGGCATGATGGGACTGGGCGTGAAAGACGTGCTGCTGCTGGTGCCGGAGTCCACGCCGGTAGT
CGAGGCGCCCGTGCCACCGGTGGCCAAAAAACGCCGTGCGCGCAAGGTGCACCAGGGCCGCTCAGGGGGCAACGCCCTGT
AG

Upstream 100 bases:

>100_bases
ACCAGCTCTGCACGGCTGGCGTGCCCGGCATTCATTTTTATACGATGAACCAGGCCGCTGCGACGACGGAGATTCTTCGG
CGTTTGCAGTACAGGGCCTG

Downstream 100 bases:

>100_bases
CGGGCTTTTGGGCTCTTGGCCGCCTCTTTCGGCGGCGCGCGAGTGCGCTACATTTTGAACATGACGAGCAAAGCAAAAGA
AGCCAGGCCCCGGCCCACGC

Product: rare lipoprotein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MACNTAPGKPVHQGAVRVWIVASLLAVLAGCATAPPVQPPSGFPPGPATKPAVTAPTAPADPMGGPAPANPSVAAEPELL
AGEVPRELERGQASWYGPRFHGRRTASGERYDMHALTAAHKTLPFGTLVRVRSLVTGREVEVRINDRGPFGAGRVIDVSR
AAAEALGMMGLGVKDVLLLVPESTPVVEAPVPPVAKKRRARKVHQGRSGGNAL

Sequences:

>Translated_213_residues
MACNTAPGKPVHQGAVRVWIVASLLAVLAGCATAPPVQPPSGFPPGPATKPAVTAPTAPADPMGGPAPANPSVAAEPELL
AGEVPRELERGQASWYGPRFHGRRTASGERYDMHALTAAHKTLPFGTLVRVRSLVTGREVEVRINDRGPFGAGRVIDVSR
AAAEALGMMGLGVKDVLLLVPESTPVVEAPVPPVAKKRRARKVHQGRSGGNAL
>Mature_212_residues
ACNTAPGKPVHQGAVRVWIVASLLAVLAGCATAPPVQPPSGFPPGPATKPAVTAPTAPADPMGGPAPANPSVAAEPELLA
GEVPRELERGQASWYGPRFHGRRTASGERYDMHALTAAHKTLPFGTLVRVRSLVTGREVEVRINDRGPFGAGRVIDVSRA
AAEALGMMGLGVKDVLLLVPESTPVVEAPVPPVAKKRRARKVHQGRSGGNAL

Specific function: Unknown

COG id: COG0797

COG function: function code M; Lipoproteins

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rlpA family [H]

Homologues:

Organism=Escherichia coli, GI1786852, Length=82, Percent_Identity=48.780487804878, Blast_Score=75, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014733
- InterPro:   IPR009009
- InterPro:   IPR012997 [H]

Pfam domain/function: PF03330 DPBB_1 [H]

EC number: NA

Molecular weight: Translated: 22064; Mature: 21933

Theoretical pI: Translated: 10.89; Mature: 10.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MACNTAPGKPVHQGAVRVWIVASLLAVLAGCATAPPVQPPSGFPPGPATKPAVTAPTAPA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCCCC
DPMGGPAPANPSVAAEPELLAGEVPRELERGQASWYGPRFHGRRTASGERYDMHALTAAH
CCCCCCCCCCCCCCCCCHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
KTLPFGTLVRVRSLVTGREVEVRINDRGPFGAGRVIDVSRAAAEALGMMGLGVKDVLLLV
HHCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEHHHHHHHHHHHHCCCHHHEEEEC
PESTPVVEAPVPPVAKKRRARKVHQGRSGGNAL
CCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
ACNTAPGKPVHQGAVRVWIVASLLAVLAGCATAPPVQPPSGFPPGPATKPAVTAPTAPA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCCCC
DPMGGPAPANPSVAAEPELLAGEVPRELERGQASWYGPRFHGRRTASGERYDMHALTAAH
CCCCCCCCCCCCCCCCCHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
KTLPFGTLVRVRSLVTGREVEVRINDRGPFGAGRVIDVSRAAAEALGMMGLGVKDVLLLV
HHCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEHHHHHHHHHHHHCCCHHHEEEEC
PESTPVVEAPVPPVAKKRRARKVHQGRSGGNAL
CCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]