| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789966
Identifier: 91789966
GI number: 91789966
Start: 4332543
End: 4333871
Strand: Reverse
Name: 91789966
Synonym: Bpro_4127
Alternate gene names: NA
Gene position: 4333871-4332543 (Counterclockwise)
Preceding gene: 91789967
Following gene: 91789965
Centisome position: 83.34
GC content: 68.85
Gene sequence:
>1329_bases ATGACAGCAACCGATCCAGGCAAAACCGCGAGCACCGCGTCACAGCCCGCCTCACAGGCGACCGCGGGATTTCTGAATAC CGACTGGAACCCGCGCGATGTGCCGCAAGGCACGCGCACCACCAATGTGGTGTTGCGTACCGCCGATGGCGCCGCCACGA GCGGCTCGCTGTACCAGCCCGCCACCCCGGCGGACACCGTGGTGTGCGTCATGCACCCGCGGGAATTCATGGCCTGCCAT TACCTGATCCCGGACATCGTCGGGGCGGGTTATGCCGCCTGGTCGCAGGCGCCGCGCTCGGTCGGCAACGACTTGCGGCT CGAACATGAATTCGCGCTGCACGACGTGGCCACCGGCCTGGCTTATCTCCGGTCGCGCGGTTTCAGGCGCATCGTGCTGC TGGGCAACTCAGGCGGCGCCGGCCTGTATGCCTTCTATGCGCAGCAGGCCGCACTGCCGGGTCAGGTGCGCATTGCCAAA ACACCCGGCGGCAAGCCCACCCAGCTGGCAGAGCTGGACATGCCCGTGCCCGATGGCATGGTGTTCATCGGCCCGCACGC GGGGCAGGGCGCGCTGCTGATGAACTGCATCGACCCTTCGGTGGCCGACGAAAATGATGCGCTGTCGGTTGACGCCTCGC TCGACCCGCTCAACCCGGCGAACGGTTATGCCGGCCCGAAAGCCACGCGCTATGCGCCGGAGTTTGTGGCGCGCTACCGG GCAGCCCAGCGTGACCGCGTCGCCCGCCTGGACGCGACGGCCCGCGCACTGATCGAGCGACGCCTGGCCGCGCGCCGGCG CGTCAAGGCCGCGGTTGACGCCGCGGGCAAGGCCGCGGTTGACGGCGCGAGCATGGGCGCCAGCGACGAAGACCGGCGGC TGGCAGGCCACACGCCCATCATCAACGTCTGGCGCACCGATGGCGATTTGCGCTGCCTTGATTTGTCGCTGGACCCGTCG GACCGCAAGTTTGGATCGTTGTGGGGCGCCGAGCCCTTTGCCTCCAACTATGGCGCGGTCGGCTTTGCACGGCAGTGCAC GCCGGAGAGCTGGCTTTCCACCTGGTCGGGCATCTCGTCCAACGCCACGCTGGCCAAGACCGCCGCGGCCATCACACAGT CGGTGCTGGTGGTCGAGTACACCGGCGATCAGGCCTGCTTTCCGGGCGACGTGCGTCAGATTTTCGAATCGCTCGCGAGC GCCGACAAGCGCCACCTGCGCGTGCGCGGCGACCACCACGGCCGTGCGCTGTCGCCCGGTGAAGAGCCCGGGCGGCTGGA GGCCGGCCGGCTGCTCGGCGCCTGGCTCCAGGAACGCTTCCCGCAGTGA
Upstream 100 bases:
>100_bases CGGCATTCGGGTTAACACTAACGTCAAATAATTGACACTTCTGTCGAATCTACCTATCATTGATCCAAATCAATGACGGG GCCGCGCTGCGGCTTGACAG
Downstream 100 bases:
>100_bases TGGCCCCGCGCCTTTTCGCACAACCTTTTTCACCCTCACGACAGAAAGACCACCATGTCAGCCCGTGACCTGCTTCCCCA ACCCGCATTGCGCGGCGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 442; Mature: 441
Protein sequence:
>442_residues MTATDPGKTASTASQPASQATAGFLNTDWNPRDVPQGTRTTNVVLRTADGAATSGSLYQPATPADTVVCVMHPREFMACH YLIPDIVGAGYAAWSQAPRSVGNDLRLEHEFALHDVATGLAYLRSRGFRRIVLLGNSGGAGLYAFYAQQAALPGQVRIAK TPGGKPTQLAELDMPVPDGMVFIGPHAGQGALLMNCIDPSVADENDALSVDASLDPLNPANGYAGPKATRYAPEFVARYR AAQRDRVARLDATARALIERRLAARRRVKAAVDAAGKAAVDGASMGASDEDRRLAGHTPIINVWRTDGDLRCLDLSLDPS DRKFGSLWGAEPFASNYGAVGFARQCTPESWLSTWSGISSNATLAKTAAAITQSVLVVEYTGDQACFPGDVRQIFESLAS ADKRHLRVRGDHHGRALSPGEEPGRLEAGRLLGAWLQERFPQ
Sequences:
>Translated_442_residues MTATDPGKTASTASQPASQATAGFLNTDWNPRDVPQGTRTTNVVLRTADGAATSGSLYQPATPADTVVCVMHPREFMACH YLIPDIVGAGYAAWSQAPRSVGNDLRLEHEFALHDVATGLAYLRSRGFRRIVLLGNSGGAGLYAFYAQQAALPGQVRIAK TPGGKPTQLAELDMPVPDGMVFIGPHAGQGALLMNCIDPSVADENDALSVDASLDPLNPANGYAGPKATRYAPEFVARYR AAQRDRVARLDATARALIERRLAARRRVKAAVDAAGKAAVDGASMGASDEDRRLAGHTPIINVWRTDGDLRCLDLSLDPS DRKFGSLWGAEPFASNYGAVGFARQCTPESWLSTWSGISSNATLAKTAAAITQSVLVVEYTGDQACFPGDVRQIFESLAS ADKRHLRVRGDHHGRALSPGEEPGRLEAGRLLGAWLQERFPQ >Mature_441_residues TATDPGKTASTASQPASQATAGFLNTDWNPRDVPQGTRTTNVVLRTADGAATSGSLYQPATPADTVVCVMHPREFMACHY LIPDIVGAGYAAWSQAPRSVGNDLRLEHEFALHDVATGLAYLRSRGFRRIVLLGNSGGAGLYAFYAQQAALPGQVRIAKT PGGKPTQLAELDMPVPDGMVFIGPHAGQGALLMNCIDPSVADENDALSVDASLDPLNPANGYAGPKATRYAPEFVARYRA AQRDRVARLDATARALIERRLAARRRVKAAVDAAGKAAVDGASMGASDEDRRLAGHTPIINVWRTDGDLRCLDLSLDPSD RKFGSLWGAEPFASNYGAVGFARQCTPESWLSTWSGISSNATLAKTAAAITQSVLVVEYTGDQACFPGDVRQIFESLASA DKRHLRVRGDHHGRALSPGEEPGRLEAGRLLGAWLQERFPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47119; Mature: 46988
Theoretical pI: Translated: 7.56; Mature: 7.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATDPGKTASTASQPASQATAGFLNTDWNPRDVPQGTRTTNVVLRTADGAATSGSLYQP CCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC ATPADTVVCVMHPREFMACHYLIPDIVGAGYAAWSQAPRSVGNDLRLEHEFALHDVATGL CCCCCEEEEEECCHHHHHHHHHHHHHHCCCHHHHHHCHHHCCCCCEEEHHHHHHHHHHHH AYLRSRGFRRIVLLGNSGGAGLYAFYAQQAALPGQVRIAKTPGGKPTQLAELDMPVPDGM HHHHCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCEEEEECCCCCCCE VFIGPHAGQGALLMNCIDPSVADENDALSVDASLDPLNPANGYAGPKATRYAPEFVARYR EEECCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHH AAQRDRVARLDATARALIERRLAARRRVKAAVDAAGKAAVDGASMGASDEDRRLAGHTPI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCEECCCCCE INVWRTDGDLRCLDLSLDPSDRKFGSLWGAEPFASNYGAVGFARQCTPESWLSTWSGISS EEEEECCCCEEEEEECCCCCCCHHHHHCCCCCHHCCCCCCCCHHHCCHHHHHHHHCCCCC NATLAKTAAAITQSVLVVEYTGDQACFPGDVRQIFESLASADKRHLRVRGDHHGRALSPG CCHHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHHHHHCCHHEEEEECCCCCCCCCCC EEPGRLEAGRLLGAWLQERFPQ CCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure TATDPGKTASTASQPASQATAGFLNTDWNPRDVPQGTRTTNVVLRTADGAATSGSLYQP CCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC ATPADTVVCVMHPREFMACHYLIPDIVGAGYAAWSQAPRSVGNDLRLEHEFALHDVATGL CCCCCEEEEEECCHHHHHHHHHHHHHHCCCHHHHHHCHHHCCCCCEEEHHHHHHHHHHHH AYLRSRGFRRIVLLGNSGGAGLYAFYAQQAALPGQVRIAKTPGGKPTQLAELDMPVPDGM HHHHCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCEEEEECCCCCCCE VFIGPHAGQGALLMNCIDPSVADENDALSVDASLDPLNPANGYAGPKATRYAPEFVARYR EEECCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHH AAQRDRVARLDATARALIERRLAARRRVKAAVDAAGKAAVDGASMGASDEDRRLAGHTPI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCEECCCCCE INVWRTDGDLRCLDLSLDPSDRKFGSLWGAEPFASNYGAVGFARQCTPESWLSTWSGISS EEEEECCCCEEEEEECCCCCCCHHHHHCCCCCHHCCCCCCCCHHHCCHHHHHHHHCCCCC NATLAKTAAAITQSVLVVEYTGDQACFPGDVRQIFESLASADKRHLRVRGDHHGRALSPG CCHHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHHHHHCCHHEEEEECCCCCCCCCCC EEPGRLEAGRLLGAWLQERFPQ CCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA