| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is erpA [H]
Identifier: 91789948
GI number: 91789948
Start: 4317148
End: 4317513
Strand: Reverse
Name: erpA [H]
Synonym: Bpro_4109
Alternate gene names: 91789948
Gene position: 4317513-4317148 (Counterclockwise)
Preceding gene: 91789949
Following gene: 91789945
Centisome position: 83.02
GC content: 56.83
Gene sequence:
>366_bases ATGAGCGCAGTTGCTGAAATTATCCAGACCGAAATGCCCGCACCCTTTGTCTTCACCGACAGCGCGGCAGCCAAGGTCGC CGAGCTGATTGCCGAAGAGGGCAATCCCGACCTGAAATTGCGCGTGTTTGTGCAGGGTGGGGGCTGCTCCGGTTTTCAGT ATGGTTTCACCTTTGATGAGATCACCAACGAAGACGACACCACCATGACCAAAAATGGCGTGTCGCTGCTGATCGACGCC ATGAGCTACCAGTACCTGGTCGGCGCCGAGATCGACTACAAGGACGACCTCGAAGGCGCGCAGTTCGTGATCAAGAACCC GAATGCGACCAGCACCTGTGGCTGCGGTTCCAGTTTTTCCGCCTGA
Upstream 100 bases:
>100_bases CCAGTCTGGCAGCCGTGGAACACTGCTTAGACGTATGAGTCCTATGGTTGATCGATTTGCTGTACTATTTGTTTGTTGAG ACCAGAATTACGGAGTTTCC
Downstream 100 bases:
>100_bases GCCGTCCGCTCTCCTCTAACCATCAAAAGCCGCCTTCGGGCGGCTTTTTGCTTTTGGTTTGGTTTGTACGGGTCTTGGGC GCTTGTCAGCCCTGATCATT
Product: iron-sulfur cluster insertion protein ErpA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MSAVAEIIQTEMPAPFVFTDSAAAKVAELIAEEGNPDLKLRVFVQGGGCSGFQYGFTFDEITNEDDTTMTKNGVSLLIDA MSYQYLVGAEIDYKDDLEGAQFVIKNPNATSTCGCGSSFSA
Sequences:
>Translated_121_residues MSAVAEIIQTEMPAPFVFTDSAAAKVAELIAEEGNPDLKLRVFVQGGGCSGFQYGFTFDEITNEDDTTMTKNGVSLLIDA MSYQYLVGAEIDYKDDLEGAQFVIKNPNATSTCGCGSSFSA >Mature_120_residues SAVAEIIQTEMPAPFVFTDSAAAKVAELIAEEGNPDLKLRVFVQGGGCSGFQYGFTFDEITNEDDTTMTKNGVSLLIDAM SYQYLVGAEIDYKDDLEGAQFVIKNPNATSTCGCGSSFSA
Specific function: Required for insertion of 4Fe-4S clusters (Potential) [H]
COG id: COG0316
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hesB/iscA family [H]
Homologues:
Organism=Homo sapiens, GI160420328, Length=104, Percent_Identity=40.3846153846154, Blast_Score=84, Evalue=3e-17, Organism=Homo sapiens, GI52426768, Length=107, Percent_Identity=31.7757009345794, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1786351, Length=110, Percent_Identity=62.7272727272727, Blast_Score=152, Evalue=4e-39, Organism=Escherichia coli, GI1788877, Length=104, Percent_Identity=34.6153846153846, Blast_Score=67, Evalue=4e-13, Organism=Caenorhabditis elegans, GI71998452, Length=105, Percent_Identity=38.0952380952381, Blast_Score=77, Evalue=2e-15, Organism=Caenorhabditis elegans, GI193209025, Length=115, Percent_Identity=30.4347826086957, Blast_Score=76, Evalue=5e-15, Organism=Caenorhabditis elegans, GI25146411, Length=123, Percent_Identity=29.2682926829268, Blast_Score=72, Evalue=5e-14, Organism=Saccharomyces cerevisiae, GI6323001, Length=95, Percent_Identity=36.8421052631579, Blast_Score=72, Evalue=2e-14, Organism=Drosophila melanogaster, GI24649697, Length=82, Percent_Identity=48.780487804878, Blast_Score=80, Evalue=4e-16, Organism=Drosophila melanogaster, GI24642263, Length=108, Percent_Identity=32.4074074074074, Blast_Score=68, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000361 - InterPro: IPR016092 - InterPro: IPR017870 - InterPro: IPR023063 [H]
Pfam domain/function: PF01521 Fe-S_biosyn [H]
EC number: NA
Molecular weight: Translated: 12899; Mature: 12768
Theoretical pI: Translated: 3.74; Mature: 3.74
Prosite motif: PS01152 HESB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAVAEIIQTEMPAPFVFTDSAAAKVAELIAEEGNPDLKLRVFVQGGGCSGFQYGFTFDE CHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCHHH ITNEDDTTMTKNGVSLLIDAMSYQYLVGAEIDYKDDLEGAQFVIKNPNATSTCGCGSSFS HCCCCCCEEECCCCEEEEHHHCCEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC A C >Mature Secondary Structure SAVAEIIQTEMPAPFVFTDSAAAKVAELIAEEGNPDLKLRVFVQGGGCSGFQYGFTFDE HHHHHHHHHCCCCCEEEECHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCHHH ITNEDDTTMTKNGVSLLIDAMSYQYLVGAEIDYKDDLEGAQFVIKNPNATSTCGCGSSFS HCCCCCCEEECCCCEEEEHHHCCEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA