Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91789949

Identifier: 91789949

GI number: 91789949

Start: 4317621

End: 4318067

Strand: Reverse

Name: 91789949

Synonym: Bpro_4110

Alternate gene names: NA

Gene position: 4318067-4317621 (Counterclockwise)

Preceding gene: 91789950

Following gene: 91789948

Centisome position: 83.04

GC content: 56.38

Gene sequence:

>447_bases
ATGTTCGGTAAAAAGAAGCAGCCCCCCATTAGAAGCCTGATTGCCCAGGGTAGCTGCATTGAAGGCAGCCTCAAATTCAC
CGACGGCCTGCGGATCGATGGCGAAGTGATTGGTGACATTCGCGCCAACGAAGGCAGCCCCAGCATTCTGGTGATTAGCG
AGTCGGCCGTGGTGACCGGGCTGGTGCATGCGGACCACGTGATCATCAATGGCCGCGTGATGGGCCCCGTTCACGCCTCG
GAACTGCTGGAACTCCAGCCCAAGGCCAGGATTGAAGGGGACGTGGCATACAAGGCGCTTGAAATGCACCAGGGCGCCGT
CATCTTTGGACAGTTGCGGCCCACAACGCTCCAGCAGCTGGAAGAAAAGCCACCCTTGAAGTTGGCCGCCAACAACAGCC
TGAACATTGCTGACGAAACAAAGACAGTAAGTACTTACAGTAAATAG

Upstream 100 bases:

>100_bases
GTGCTTGAAGGCACGACAGTCCGCTCCGTTCAGACCTTCAAGCTCTGACTTCCCGCCTCGTCCTCCATTCCAATCCAGCC
CCACCTCGAGGAACCCGTAT

Downstream 100 bases:

>100_bases
TCGAAAGCCAGTCTGGCAGCCGTGGAACACTGCTTAGACGTATGAGTCCTATGGTTGATCGATTTGCTGTACTATTTGTT
TGTTGAGACCAGAATTACGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MFGKKKQPPIRSLIAQGSCIEGSLKFTDGLRIDGEVIGDIRANEGSPSILVISESAVVTGLVHADHVIINGRVMGPVHAS
ELLELQPKARIEGDVAYKALEMHQGAVIFGQLRPTTLQQLEEKPPLKLAANNSLNIADETKTVSTYSK

Sequences:

>Translated_148_residues
MFGKKKQPPIRSLIAQGSCIEGSLKFTDGLRIDGEVIGDIRANEGSPSILVISESAVVTGLVHADHVIINGRVMGPVHAS
ELLELQPKARIEGDVAYKALEMHQGAVIFGQLRPTTLQQLEEKPPLKLAANNSLNIADETKTVSTYSK
>Mature_148_residues
MFGKKKQPPIRSLIAQGSCIEGSLKFTDGLRIDGEVIGDIRANEGSPSILVISESAVVTGLVHADHVIINGRVMGPVHAS
ELLELQPKARIEGDVAYKALEMHQGAVIFGQLRPTTLQQLEEKPPLKLAANNSLNIADETKTVSTYSK

Specific function: Unknown

COG id: COG1664

COG function: function code M; Integral membrane protein CcmA involved in cell shape determination

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15925; Mature: 15925

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGKKKQPPIRSLIAQGSCIEGSLKFTDGLRIDGEVIGDIRANEGSPSILVISESAVVTG
CCCCCCCCHHHHHHHCCCCCCCCEEECCCEEECCEEEEEEECCCCCCEEEEEECCCEEEE
LVHADHVIINGRVMGPVHASELLELQPKARIEGDVAYKALEMHQGAVIFGQLRPTTLQQL
EEECCEEEECCEEECCCCHHHHHHCCCCCCCCCHHHHEEEHHCCCEEEEECCCCHHHHHH
EEKPPLKLAANNSLNIADETKTVSTYSK
HCCCCEEEECCCCCCCCCCCCEEECCCC
>Mature Secondary Structure
MFGKKKQPPIRSLIAQGSCIEGSLKFTDGLRIDGEVIGDIRANEGSPSILVISESAVVTG
CCCCCCCCHHHHHHHCCCCCCCCEEECCCEEECCEEEEEEECCCCCCEEEEEECCCEEEE
LVHADHVIINGRVMGPVHASELLELQPKARIEGDVAYKALEMHQGAVIFGQLRPTTLQQL
EEECCEEEECCEEECCCCHHHHHHCCCCCCCCCHHHHEEEHHCCCEEEEECCCCHHHHHH
EEKPPLKLAANNSLNIADETKTVSTYSK
HCCCCEEEECCCCCCCCCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA