| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is ybeZ [H]
Identifier: 91789934
GI number: 91789934
Start: 4303885
End: 4304898
Strand: Direct
Name: ybeZ [H]
Synonym: Bpro_4095
Alternate gene names: 91789934
Gene position: 4303885-4304898 (Clockwise)
Preceding gene: 91789931
Following gene: 91789935
Centisome position: 82.76
GC content: 65.78
Gene sequence:
>1014_bases TTGATCCTTCGCTACACCTTCACGCCGCCCAACAACACCCGCATGGGGCATCTGTGCGGGCCCATGGACTCCCATATCCG CACCATCGAGGCCGCGCTGCAGGTGACGATTGCGCACCGGTTCGAGCAGTTCAAGATCGACGGCCCCAAGGTCAGGGCCC AGCAGGCGCTGGAGGTGCTGCAGGCGCTGTACGAGATGGCCCAGCGGCCCATTGCCGAGGAAACCGTGCAGCTCATGCTG GCCAGCGACACCCCGATGAGCGCGGCGCCCGACGGTGCCATGGCGCTGTCGACGCGGCGCGCCGACCTGCGCGCCCGCAC CACCAACCAGGGCCAATACCTCGAGAACATTGCCACCCACGACATCACCTTTGGCATTGGCCCGGCTGGCACCGGCAAGA CCTACCTGGCGGTCGCCTGCGCGGTCGACGCACTGGAGCGCAGCACCGTGCAGCGCATCGTGCTGACGCGCCCGGCCGTG GAGGCGGGCGAGCGCCTGGGCTTTTTGCCGGGCGACCTGAGCCAGAAGGTCGACCCTTACCTGCGCCCGCTCTATGACGC GCTGTATGAACTGATGGGCTTTGAACGCGTGCAAAAAGCCTTTGAACGCCAGCAGATCGAAATCGCCCCGCTGGCCTTCA TGCGCGGCCGCACGCTGAACCACGCCTTTGTGATCCTGGACGAGGCGCAGAACACCACGCCCGAGCAGATGAAGATGTTT CTGACCCGCATCGGCTTTGGCGCCAAGGCGGTGGTGACCGGCGATGTCAGCCAGGTCGATTTGCCGCGCACGCAGCTCAG CGGACTGATCGACGCCGAACGCGTGCTGCGGCGTGTCAAGGGGATTGCGATCACGCGCCTGACCAGCGCCGACGTGGTGC GGCACCCGCTGGTGGCGCGCATTGTGGACGCCTACGACAAACAGCGCACTCCCGAAGTGGCCTCGGTTGACGCTATCGAT TCAATAGGCCCCATCAAGCGCCCTTCGCGGGTCAGGAGCCGAAATGGCTCCTGA
Upstream 100 bases:
>100_bases GAGATTCTTCCGATCATGGCCAAATCTTATCAGTCAGGCAGGCGCGGAAATTTGGGGGGACAATCTCGCGAGAACCCACC CTTTCAGAAAAAGCCGCGCC
Downstream 100 bases:
>100_bases TGTTCCGCTCAGGCAGCTCGACCTTTCCCTGCAGTTCGGCCAGTTCCCCGGCGTCGCCCGGCATCGCGCCGCCCTGCCGC GCCGCCGCGTGCAGCGCTGG
Product: PhoH-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MILRYTFTPPNNTRMGHLCGPMDSHIRTIEAALQVTIAHRFEQFKIDGPKVRAQQALEVLQALYEMAQRPIAEETVQLML ASDTPMSAAPDGAMALSTRRADLRARTTNQGQYLENIATHDITFGIGPAGTGKTYLAVACAVDALERSTVQRIVLTRPAV EAGERLGFLPGDLSQKVDPYLRPLYDALYELMGFERVQKAFERQQIEIAPLAFMRGRTLNHAFVILDEAQNTTPEQMKMF LTRIGFGAKAVVTGDVSQVDLPRTQLSGLIDAERVLRRVKGIAITRLTSADVVRHPLVARIVDAYDKQRTPEVASVDAID SIGPIKRPSRVRSRNGS
Sequences:
>Translated_337_residues MILRYTFTPPNNTRMGHLCGPMDSHIRTIEAALQVTIAHRFEQFKIDGPKVRAQQALEVLQALYEMAQRPIAEETVQLML ASDTPMSAAPDGAMALSTRRADLRARTTNQGQYLENIATHDITFGIGPAGTGKTYLAVACAVDALERSTVQRIVLTRPAV EAGERLGFLPGDLSQKVDPYLRPLYDALYELMGFERVQKAFERQQIEIAPLAFMRGRTLNHAFVILDEAQNTTPEQMKMF LTRIGFGAKAVVTGDVSQVDLPRTQLSGLIDAERVLRRVKGIAITRLTSADVVRHPLVARIVDAYDKQRTPEVASVDAID SIGPIKRPSRVRSRNGS >Mature_337_residues MILRYTFTPPNNTRMGHLCGPMDSHIRTIEAALQVTIAHRFEQFKIDGPKVRAQQALEVLQALYEMAQRPIAEETVQLML ASDTPMSAAPDGAMALSTRRADLRARTTNQGQYLENIATHDITFGIGPAGTGKTYLAVACAVDALERSTVQRIVLTRPAV EAGERLGFLPGDLSQKVDPYLRPLYDALYELMGFERVQKAFERQQIEIAPLAFMRGRTLNHAFVILDEAQNTTPEQMKMF LTRIGFGAKAVVTGDVSQVDLPRTQLSGLIDAERVLRRVKGIAITRLTSADVVRHPLVARIVDAYDKQRTPEVASVDAID SIGPIKRPSRVRSRNGS
Specific function: Unknown
COG id: COG1702
COG function: function code T; Phosphate starvation-inducible protein PhoH, predicted ATPase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoH family [H]
Homologues:
Organism=Escherichia coli, GI145693103, Length=322, Percent_Identity=54.9689440993789, Blast_Score=325, Evalue=2e-90, Organism=Escherichia coli, GI1787257, Length=203, Percent_Identity=46.3054187192118, Blast_Score=184, Evalue=9e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 37293; Mature: 37293
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILRYTFTPPNNTRMGHLCGPMDSHIRTIEAALQVTIAHRFEQFKIDGPKVRAQQALEVL CEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH QALYEMAQRPIAEETVQLMLASDTPMSAAPDGAMALSTRRADLRARTTNQGQYLENIATH HHHHHHHHCCHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHH DITFGIGPAGTGKTYLAVACAVDALERSTVQRIVLTRPAVEAGERLGFLPGDLSQKVDPY CEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHCCHH LRPLYDALYELMGFERVQKAFERQQIEIAPLAFMRGRTLNHAFVILDEAQNTTPEQMKMF HHHHHHHHHHHHCHHHHHHHHHHCCEEEHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHH LTRIGFGAKAVVTGDVSQVDLPRTQLSGLIDAERVLRRVKGIAITRLTSADVVRHPLVAR HHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCHHEEEECHHHHHHHHHHHH IVDAYDKQRTPEVASVDAIDSIGPIKRPSRVRSRNGS HHHHHHHCCCCCCCCHHHHHCCCCCCCCHHHHCCCCC >Mature Secondary Structure MILRYTFTPPNNTRMGHLCGPMDSHIRTIEAALQVTIAHRFEQFKIDGPKVRAQQALEVL CEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH QALYEMAQRPIAEETVQLMLASDTPMSAAPDGAMALSTRRADLRARTTNQGQYLENIATH HHHHHHHHCCHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHH DITFGIGPAGTGKTYLAVACAVDALERSTVQRIVLTRPAVEAGERLGFLPGDLSQKVDPY CEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHCCHH LRPLYDALYELMGFERVQKAFERQQIEIAPLAFMRGRTLNHAFVILDEAQNTTPEQMKMF HHHHHHHHHHHHCHHHHHHHHHHCCEEEHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHH LTRIGFGAKAVVTGDVSQVDLPRTQLSGLIDAERVLRRVKGIAITRLTSADVVRHPLVAR HHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCHHEEEECHHHHHHHHHHHH IVDAYDKQRTPEVASVDAIDSIGPIKRPSRVRSRNGS HHHHHHHCCCCCCCCHHHHHCCCCCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]