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The map label for this gene is perR [H]

Identifier: 91789922

GI number: 91789922

Start: 4293512

End: 4294459

Strand: Direct

Name: perR [H]

Synonym: Bpro_4083

Alternate gene names: 91789922

Gene position: 4293512-4294459 (Clockwise)

Preceding gene: 91789920

Following gene: 91789926

Centisome position: 82.56

GC content: 64.24

Gene sequence:

>948_bases
ATGAATTTCATTCATGAATCAAGAAACACTATGAGACGCGCCCCGAATTTCGTCTTGCTGCGGGCGTTTGAGTCTGCGGC
CCGGCTGGAAAGCTTTACGCTTGCCGCGCGTGAATTGCACCTGACCCAGTCGGCGATCAGCCACCAGGTGCGAGAGCTGG
AGGACTATTTCGGCCGACCCCTCTTCATCCGGCGCAACCGCCGCGTCGAACTGGTGGCCGAGGGGCGGCGGCTGCTTGAC
AGTCTTTCGCGGGTGTTTGATGTCATCGAGGCGGCCTGCGACGAGGTGGCGCTGGCGCCGCGGGCACAGGTGCTGGCGCT
GCATTGCGCACCCAGCTTTGCCGCCAAATGGCTGGGGCCCCGCCTGCCTGAATTCATGCAAGCCCATGCCGACATCACCA
TCCGGTTGACCTCGGGCGCAGAGCCTGTCGACCTCACCCGCATGCGGGAGATCGACGTGGCGATTGCCTATGGGCCCGTG
CAGGAACGGGCGGGCGTGCTCTCCATCGCCCTGGGGCGCGAGCGCATCGTTCCCCTGTGCTCGCCGCAACTGGTGGATGG
CACGCGCCCCATCCGCCAGCAAATCCGTGACCTGGTCCTGATCGACTCCCAGCTCAGCGCCATCACCTGGCCCGGCTGGT
TTGCGCGCAACGGGCTCACGCTGCCTGCGCGGCCCCGGCCGTCGTTCGACCGCGCGGCGCTCTCCATTTCTGCCGCTGTC
GACGCCATGGGTGTCGCCCTGGAAAGCGTCCGTCTTGCCGAGCGCGAAATCTCCCGCGGCGAACTGGTTGAACTGGGAAG
GGACGTTTTTTTCCCCATTGCAGAGGAAACCCACTTTGTGTCCTGCCGGGTGAATGAGCAGCACACGGAAAAGGTCCGGC
TTTTCCGTGAATGGCTTTTCAAGGCGGCAGGCGTCGATGTGGGCCGGGGCAACGCGCCAATTCCTTGA

Upstream 100 bases:

>100_bases
AGGCCAGAGGACTCCGCTGCATACCGCGCACCCGTCTTTTCGGTGAGGCCATGTTCGCGCTCTTTTCAGACGTTGACAAA
CGATAGATGTTCATGAAAAG

Downstream 100 bases:

>100_bases
AGGCGGATACCTGGGGCGATTTTGAGTCGAGCCCCAAGGCCGTCACGCTGACCCCGACGGAGTGCTGTGGGCTAACTGAC
CAGCGCCAGGGCCCCGAAAT

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: Peroxide resistance protein perR [H]

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MNFIHESRNTMRRAPNFVLLRAFESAARLESFTLAARELHLTQSAISHQVRELEDYFGRPLFIRRNRRVELVAEGRRLLD
SLSRVFDVIEAACDEVALAPRAQVLALHCAPSFAAKWLGPRLPEFMQAHADITIRLTSGAEPVDLTRMREIDVAIAYGPV
QERAGVLSIALGRERIVPLCSPQLVDGTRPIRQQIRDLVLIDSQLSAITWPGWFARNGLTLPARPRPSFDRAALSISAAV
DAMGVALESVRLAEREISRGELVELGRDVFFPIAEETHFVSCRVNEQHTEKVRLFREWLFKAAGVDVGRGNAPIP

Sequences:

>Translated_315_residues
MNFIHESRNTMRRAPNFVLLRAFESAARLESFTLAARELHLTQSAISHQVRELEDYFGRPLFIRRNRRVELVAEGRRLLD
SLSRVFDVIEAACDEVALAPRAQVLALHCAPSFAAKWLGPRLPEFMQAHADITIRLTSGAEPVDLTRMREIDVAIAYGPV
QERAGVLSIALGRERIVPLCSPQLVDGTRPIRQQIRDLVLIDSQLSAITWPGWFARNGLTLPARPRPSFDRAALSISAAV
DAMGVALESVRLAEREISRGELVELGRDVFFPIAEETHFVSCRVNEQHTEKVRLFREWLFKAAGVDVGRGNAPIP
>Mature_315_residues
MNFIHESRNTMRRAPNFVLLRAFESAARLESFTLAARELHLTQSAISHQVRELEDYFGRPLFIRRNRRVELVAEGRRLLD
SLSRVFDVIEAACDEVALAPRAQVLALHCAPSFAAKWLGPRLPEFMQAHADITIRLTSGAEPVDLTRMREIDVAIAYGPV
QERAGVLSIALGRERIVPLCSPQLVDGTRPIRQQIRDLVLIDSQLSAITWPGWFARNGLTLPARPRPSFDRAALSISAAV
DAMGVALESVRLAEREISRGELVELGRDVFFPIAEETHFVSCRVNEQHTEKVRLFREWLFKAAGVDVGRGNAPIP

Specific function: Apparent regulatory gene involved in peroxide resistance in stationary phase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786448, Length=299, Percent_Identity=37.123745819398, Blast_Score=165, Evalue=4e-42,
Organism=Escherichia coli, GI1789173, Length=299, Percent_Identity=32.1070234113712, Blast_Score=141, Evalue=6e-35,
Organism=Escherichia coli, GI1788706, Length=307, Percent_Identity=29.9674267100977, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI157672245, Length=144, Percent_Identity=34.0277777777778, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI145693193, Length=173, Percent_Identity=30.0578034682081, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI1786401, Length=297, Percent_Identity=25.2525252525253, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI48994962, Length=144, Percent_Identity=31.25, Blast_Score=62, Evalue=5e-11,
Organism=Escherichia coli, GI1790208, Length=186, Percent_Identity=29.0322580645161, Blast_Score=61, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 35316; Mature: 35316

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFIHESRNTMRRAPNFVLLRAFESAARLESFTLAARELHLTQSAISHQVRELEDYFGRP
CCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE
LFIRRNRRVELVAEGRRLLDSLSRVFDVIEAACDEVALAPRAQVLALHCAPSFAAKWLGP
EEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHCCC
RLPEFMQAHADITIRLTSGAEPVDLTRMREIDVAIAYGPVQERAGVLSIALGRERIVPLC
CCHHHHHCCCCEEEEECCCCCCCCHHHHHHEEEEEEECCHHHHCCEEEEECCCCCCCCCC
SPQLVDGTRPIRQQIRDLVLIDSQLSAITWPGWFARNGLTLPARPRPSFDRAALSISAAV
CCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCHHHCCCCCCCCCCCCCHHHHHHHHHHHH
DAMGVALESVRLAEREISRGELVELGRDVFFPIAEETHFVSCRVNEQHTEKVRLFREWLF
HHHHHHHHHHHHHHHHCCCCHHHHHCCHHEEECCCCCEEEEEEECHHHHHHHHHHHHHHH
KAAGVDVGRGNAPIP
HHCCCCCCCCCCCCC
>Mature Secondary Structure
MNFIHESRNTMRRAPNFVLLRAFESAARLESFTLAARELHLTQSAISHQVRELEDYFGRP
CCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE
LFIRRNRRVELVAEGRRLLDSLSRVFDVIEAACDEVALAPRAQVLALHCAPSFAAKWLGP
EEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHCCC
RLPEFMQAHADITIRLTSGAEPVDLTRMREIDVAIAYGPVQERAGVLSIALGRERIVPLC
CCHHHHHCCCCEEEEECCCCCCCCHHHHHHEEEEEEECCHHHHCCEEEEECCCCCCCCCC
SPQLVDGTRPIRQQIRDLVLIDSQLSAITWPGWFARNGLTLPARPRPSFDRAALSISAAV
CCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCHHHCCCCCCCCCCCCCHHHHHHHHHHHH
DAMGVALESVRLAEREISRGELVELGRDVFFPIAEETHFVSCRVNEQHTEKVRLFREWLF
HHHHHHHHHHHHHHHHCCCCHHHHHCCHHEEECCCCCEEEEEEECHHHHHHHHHHHHHHH
KAAGVDVGRGNAPIP
HHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]