| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is livK [C]
Identifier: 91789903
GI number: 91789903
Start: 4272521
End: 4273726
Strand: Reverse
Name: livK [C]
Synonym: Bpro_4064
Alternate gene names: 91789903
Gene position: 4273726-4272521 (Counterclockwise)
Preceding gene: 91789904
Following gene: 91789902
Centisome position: 82.18
GC content: 59.04
Gene sequence:
>1206_bases ATGAACATGCAACACAAAATACTGAGCGCCGTGACCTGTCTTGGTCTGATGGCCTCGCTGGTGACCGCTCAGGCACAAGA CGTCATCAAGATTGGCGAGATCAACAGCTACAAGGCCCAGCCGGCCTTTCTGGAGCCCTACAAGAAAGGCATGGAGCTGG CTGTCGAGGAAATCAACGCCTCCGGCGGCGTCAACGGCAAGAAGGTGCAGCTGATCATCCGGGACGACAACGCCAATCCG GGTGACGCGGTGCGTGCGGCCGAGGAACTTGTCTCACGTGAGAAGGTGGATGTGCTGACCGGCTCCTTCCTGTCCCACAT TGGCCTGGCGCTGACGGACTTTGCCAAACAGAAGAAGTTTTTCTTCCTGGCCGCGGAACCGCTGACCGACAAAATTGTCT GGCAAAACGGCAACCGCTATACCTTCCGCCTGCGCACCTCGACTTATATGCAGGTGGCCATGCTGGTTCCGGAAGCTGCG GCAATGAAGAAAAAGCGCTGGGCGGTGGTGTACCCCAACTATGAGTACGGCCAGTCCGCAGCGGCCACCTTCAAAACGCT GCTGAAGGCGGCCCAGCCCGATGTGGAGTTCGTCGCCGAGCAGGCGCCACCCCTGGGCAAGGTCGATTCCGGCAGCGTGG TGCAGGCCCTCGCTGACGCCAAACCTGATGCCATCTTCAACGTGCTGTTTGGTGCCGATCTGTCGAAGTTCGTTCGCGAA GGCAACACCCGTGGCCTGTTCCAGGGCCGTGAAGTCGTGAGTCTGCTGACCGGCGAGCCCGAGTACCTTGATCCTCTGAA GGACGAAACGCCCAATGGCTGGGTCGTCACCGGTTACCCCTGGTACGGCATCCAGACGCCGGAGCACAAGGCATTCTTTC TGGCTTACCACGGGAAATACAAAGACTATCCCCGCCTGGGCTCCGTCGTTGGGTACAGCGCCATCAAGTCCCTGGCCGAA GGCATGAAAAAAGCCAGGTCGACCGACACGGAAAAGCTGATTGCAGCCTTCAGCGGCCTGCAGGTGAAAACGCCCTTCGG CCCTGTGGTTTACCGTCCGGAAGATCACCAGTCCACCATGGGCATCTATGTCGGGCGCACCAAAAACGAAGGGGGAAAAG GCGTGATGGTCGACTACCGCTACATGGACGGTGCGAAGTTTCAGCCTGGCAACGCAGAAGTGAAGAAGTTGCGCGCCGCT GACTAA
Upstream 100 bases:
>100_bases AGGTCCACGAAATCAAAGGTGAAGATGGACTCCGGTAAGCCGGGCGCATCACAAATTAATCCGATCCACGTAATCCGATC CACGACAAGCAGGAGTTTTT
Downstream 100 bases:
>100_bases CAAGGCGAATGCACCGCGAAACGCCGCTTGGCACTCGCAGCTCAAGCACGCGGGTGTCAGCCGCCAGGTTTGCCGTCGTC CGTTTCGCAAAGTCATCATG
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 401; Mature: 401
Protein sequence:
>401_residues MNMQHKILSAVTCLGLMASLVTAQAQDVIKIGEINSYKAQPAFLEPYKKGMELAVEEINASGGVNGKKVQLIIRDDNANP GDAVRAAEELVSREKVDVLTGSFLSHIGLALTDFAKQKKFFFLAAEPLTDKIVWQNGNRYTFRLRTSTYMQVAMLVPEAA AMKKKRWAVVYPNYEYGQSAAATFKTLLKAAQPDVEFVAEQAPPLGKVDSGSVVQALADAKPDAIFNVLFGADLSKFVRE GNTRGLFQGREVVSLLTGEPEYLDPLKDETPNGWVVTGYPWYGIQTPEHKAFFLAYHGKYKDYPRLGSVVGYSAIKSLAE GMKKARSTDTEKLIAAFSGLQVKTPFGPVVYRPEDHQSTMGIYVGRTKNEGGKGVMVDYRYMDGAKFQPGNAEVKKLRAA D
Sequences:
>Translated_401_residues MNMQHKILSAVTCLGLMASLVTAQAQDVIKIGEINSYKAQPAFLEPYKKGMELAVEEINASGGVNGKKVQLIIRDDNANP GDAVRAAEELVSREKVDVLTGSFLSHIGLALTDFAKQKKFFFLAAEPLTDKIVWQNGNRYTFRLRTSTYMQVAMLVPEAA AMKKKRWAVVYPNYEYGQSAAATFKTLLKAAQPDVEFVAEQAPPLGKVDSGSVVQALADAKPDAIFNVLFGADLSKFVRE GNTRGLFQGREVVSLLTGEPEYLDPLKDETPNGWVVTGYPWYGIQTPEHKAFFLAYHGKYKDYPRLGSVVGYSAIKSLAE GMKKARSTDTEKLIAAFSGLQVKTPFGPVVYRPEDHQSTMGIYVGRTKNEGGKGVMVDYRYMDGAKFQPGNAEVKKLRAA D >Mature_401_residues MNMQHKILSAVTCLGLMASLVTAQAQDVIKIGEINSYKAQPAFLEPYKKGMELAVEEINASGGVNGKKVQLIIRDDNANP GDAVRAAEELVSREKVDVLTGSFLSHIGLALTDFAKQKKFFFLAAEPLTDKIVWQNGNRYTFRLRTSTYMQVAMLVPEAA AMKKKRWAVVYPNYEYGQSAAATFKTLLKAAQPDVEFVAEQAPPLGKVDSGSVVQALADAKPDAIFNVLFGADLSKFVRE GNTRGLFQGREVVSLLTGEPEYLDPLKDETPNGWVVTGYPWYGIQTPEHKAFFLAYHGKYKDYPRLGSVVGYSAIKSLAE GMKKARSTDTEKLIAAFSGLQVKTPFGPVVYRPEDHQSTMGIYVGRTKNEGGKGVMVDYRYMDGAKFQPGNAEVKKLRAA D
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI48994941, Length=360, Percent_Identity=24.1666666666667, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1789867, Length=354, Percent_Identity=23.4463276836158, Blast_Score=61, Evalue=1e-10,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 44089; Mature: 44089
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMQHKILSAVTCLGLMASLVTAQAQDVIKIGEINSYKAQPAFLEPYKKGMELAVEEINA CCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCC SGGVNGKKVQLIIRDDNANPGDAVRAAEELVSREKVDVLTGSFLSHIGLALTDFAKQKKF CCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE FFLAAEPLTDKIVWQNGNRYTFRLRTSTYMQVAMLVPEAAAMKKKRWAVVYPNYEYGQSA EEEECCCCCCEEEEECCCEEEEEEECHHHEEHHHHCCCHHHHHCCCEEEECCCCCCCCHH AATFKTLLKAAQPDVEFVAEQAPPLGKVDSGSVVQALADAKPDAIFNVLFGADLSKFVRE HHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHCCHHHHHHC GNTRGLFQGREVVSLLTGEPEYLDPLKDETPNGWVVTGYPWYGIQTPEHKAFFLAYHGKY CCCCCCCCHHHHHHHHCCCCHHCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEECCCC KDYPRLGSVVGYSAIKSLAEGMKKARSTDTEKLIAAFSGLQVKTPFGPVVYRPEDHQSTM CCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEECCCCCEEECCCCCCCCE GIYVGRTKNEGGKGVMVDYRYMDGAKFQPGNAEVKKLRAAD EEEEEECCCCCCCEEEEEEEECCCCCCCCCCHHHHHHCCCC >Mature Secondary Structure MNMQHKILSAVTCLGLMASLVTAQAQDVIKIGEINSYKAQPAFLEPYKKGMELAVEEINA CCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCC SGGVNGKKVQLIIRDDNANPGDAVRAAEELVSREKVDVLTGSFLSHIGLALTDFAKQKKF CCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE FFLAAEPLTDKIVWQNGNRYTFRLRTSTYMQVAMLVPEAAAMKKKRWAVVYPNYEYGQSA EEEECCCCCCEEEEECCCEEEEEEECHHHEEHHHHCCCHHHHHCCCEEEECCCCCCCCHH AATFKTLLKAAQPDVEFVAEQAPPLGKVDSGSVVQALADAKPDAIFNVLFGADLSKFVRE HHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHCCHHHHHHC GNTRGLFQGREVVSLLTGEPEYLDPLKDETPNGWVVTGYPWYGIQTPEHKAFFLAYHGKY CCCCCCCCHHHHHHHHCCCCHHCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEECCCC KDYPRLGSVVGYSAIKSLAEGMKKARSTDTEKLIAAFSGLQVKTPFGPVVYRPEDHQSTM CCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEECCCCCEEECCCCCCCCE GIYVGRTKNEGGKGVMVDYRYMDGAKFQPGNAEVKKLRAAD EEEEEECCCCCCCEEEEEEEECCCCCCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA