| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789904
Identifier: 91789904
GI number: 91789904
Start: 4273789
End: 4274373
Strand: Reverse
Name: 91789904
Synonym: Bpro_4065
Alternate gene names: NA
Gene position: 4274373-4273789 (Counterclockwise)
Preceding gene: 91789905
Following gene: 91789903
Centisome position: 82.2
GC content: 61.71
Gene sequence:
>585_bases ATGACAGCCAGGATTCGAAAAATCATTGTCCAGGTCGATGAGACCCGTGTCGAGATGGGCAGGGCCGTTGATCCGCCAAC GCGCAAGGCGCTGGCCATGGCGGTGATCGACAACCCTTTCGCCGGGACTTACACGGAAAACCTTGACGAGTTGATCGCCA TAGGCGAAGAGCTGGGTGGTCTGCTGGGGCAAAAGTGCGTGCAGGCCCTGGGTATCTCGCCTGGCCAGGCGCACAGTTAT GGCAAGGCGGCGATTGTCGGCGAAGCCGGCGAGCTTGAGCATGCCGCTGCCATCCTGCATCCCAGGCTGGGTGCGCCGCT GCGTCTGGCGGTTGAAAAAGGAGCCGCATTGGTGCCTTCCAGCAAAAAGCGGGGTGGCCTCGGCACCGCGATCGACGTTC CGCTCGGGCATAAGGACGCGGCTTTTGTGCGCAGCCACTTCGATGCAATGGAGGCGCGCGTTGCCGATGCACCGCGTGCC AATGAAATTGTGGTCGCTGTCGTTGTGACAGACAGCGGCCGACCCCTTGCGCGCGTGGGCGGACTGCAGGTCCACGAAAT CAAAGGTGAAGATGGACTCCGGTAA
Upstream 100 bases:
>100_bases GAAGCGACAAGCGTGGGGGCTACGTCTCGCCTTGCCAGCCCACCCCATGACGGCCCACTCGGGCACGTCCAACTGCGGTT TCTAGATTCAAGGAAAAACC
Downstream 100 bases:
>100_bases GCCGGGCGCATCACAAATTAATCCGATCCACGTAATCCGATCCACGACAAGCAGGAGTTTTTATGAACATGCAACACAAA ATACTGAGCGCCGTGACCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MTARIRKIIVQVDETRVEMGRAVDPPTRKALAMAVIDNPFAGTYTENLDELIAIGEELGGLLGQKCVQALGISPGQAHSY GKAAIVGEAGELEHAAAILHPRLGAPLRLAVEKGAALVPSSKKRGGLGTAIDVPLGHKDAAFVRSHFDAMEARVADAPRA NEIVVAVVVTDSGRPLARVGGLQVHEIKGEDGLR
Sequences:
>Translated_194_residues MTARIRKIIVQVDETRVEMGRAVDPPTRKALAMAVIDNPFAGTYTENLDELIAIGEELGGLLGQKCVQALGISPGQAHSY GKAAIVGEAGELEHAAAILHPRLGAPLRLAVEKGAALVPSSKKRGGLGTAIDVPLGHKDAAFVRSHFDAMEARVADAPRA NEIVVAVVVTDSGRPLARVGGLQVHEIKGEDGLR >Mature_193_residues TARIRKIIVQVDETRVEMGRAVDPPTRKALAMAVIDNPFAGTYTENLDELIAIGEELGGLLGQKCVQALGISPGQAHSYG KAAIVGEAGELEHAAAILHPRLGAPLRLAVEKGAALVPSSKKRGGLGTAIDVPLGHKDAAFVRSHFDAMEARVADAPRAN EIVVAVVVTDSGRPLARVGGLQVHEIKGEDGLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20315; Mature: 20183
Theoretical pI: Translated: 7.17; Mature: 7.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTARIRKIIVQVDETRVEMGRAVDPPTRKALAMAVIDNPFAGTYTENLDELIAIGEELGG CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHH LLGQKCVQALGISPGQAHSYGKAAIVGEAGELEHAAAILHPRLGAPLRLAVEKGAALVPS HHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCCEEEEECCCCEECCC SKKRGGLGTAIDVPLGHKDAAFVRSHFDAMEARVADAPRANEIVVAVVVTDSGRPLARVG CCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCHHHHC GLQVHEIKGEDGLR CEEEEEECCCCCCC >Mature Secondary Structure TARIRKIIVQVDETRVEMGRAVDPPTRKALAMAVIDNPFAGTYTENLDELIAIGEELGG CHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHH LLGQKCVQALGISPGQAHSYGKAAIVGEAGELEHAAAILHPRLGAPLRLAVEKGAALVPS HHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCCEEEEECCCCEECCC SKKRGGLGTAIDVPLGHKDAAFVRSHFDAMEARVADAPRANEIVVAVVVTDSGRPLARVG CCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCHHHHC GLQVHEIKGEDGLR CEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA