| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is iorA [H]
Identifier: 91789898
GI number: 91789898
Start: 4267032
End: 4267529
Strand: Reverse
Name: iorA [H]
Synonym: Bpro_4059
Alternate gene names: 91789898
Gene position: 4267529-4267032 (Counterclockwise)
Preceding gene: 91789899
Following gene: 91789897
Centisome position: 82.06
GC content: 65.06
Gene sequence:
>498_bases ATGACATCCAGGGTCGTGACTCTCGGCGTTAACCAGGTGAGGCGCACGCTGGCTGTTTCAGCGCAGGTTTCCCTGCTTGA AGTGCTGCGCAACGACCTGGAACTCAACAGCCCCAAATATGGCTGTGGCCTGGGCGAATGCGGCGCATGCACCGTGCTGG TTGACGGCGTAGCGGCACGCGCCTGCGTGATCCCGGCCTGCGGGGTGGCCGGCCGGGAAATCACCACGCTGGAAGGCCTG GGTTCGCTGTCGGCACTGCACCCGGTCCAGCAGGCGTTCATTGACGAGCAGGCCGCCCAGTGCGGCTACTGCCTGAGCGG CATGATCATGATGACCGTGGCGCTGCTGGCGCGCAACCCGGATCCGAGCGAAGACGAGATACGCCGCGAGCTGTCGGGCA ATTTGTGCCGCTGCGGTACCCATCTGGAGATTGTGAAGGCCGTGCGGCGCGCGGCGGAGCTTATGGCGCAAAACCTTTCG CGCGGGGGAGCGACATGA
Upstream 100 bases:
>100_bases TGGATCTGGGCGACTTCCGGGTCGACTACAGCCCGAAAAACCACAACGGCTCCAGCTTCGTGGAGCTTGAGATGTACACC GCAGCAGGCACTTTGATTCG
Downstream 100 bases:
>100_bases TTCGCCGCGCCGACACGCCGCTCACACGGGCCGATTTTCACGTTGCTGAGGGCGTTCTGCTCGTGACCCGCGAGCCGCCG ACAGCGCCGCCGACTGTCAA
Product: (2Fe-2S)-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MTSRVVTLGVNQVRRTLAVSAQVSLLEVLRNDLELNSPKYGCGLGECGACTVLVDGVAARACVIPACGVAGREITTLEGL GSLSALHPVQQAFIDEQAAQCGYCLSGMIMMTVALLARNPDPSEDEIRRELSGNLCRCGTHLEIVKAVRRAAELMAQNLS RGGAT
Sequences:
>Translated_165_residues MTSRVVTLGVNQVRRTLAVSAQVSLLEVLRNDLELNSPKYGCGLGECGACTVLVDGVAARACVIPACGVAGREITTLEGL GSLSALHPVQQAFIDEQAAQCGYCLSGMIMMTVALLARNPDPSEDEIRRELSGNLCRCGTHLEIVKAVRRAAELMAQNLS RGGAT >Mature_164_residues TSRVVTLGVNQVRRTLAVSAQVSLLEVLRNDLELNSPKYGCGLGECGACTVLVDGVAARACVIPACGVAGREITTLEGLG SLSALHPVQQAFIDEQAAQCGYCLSGMIMMTVALLARNPDPSEDEIRRELSGNLCRCGTHLEIVKAVRRAAELMAQNLSR GGAT
Specific function: Specific towards N-containing N-heterocyclic substrates, including isoquinoline, isoquinolin-5-ol, phthalazine and quinazoline [H]
COG id: COG2080
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]
Homologues:
Organism=Homo sapiens, GI71773480, Length=92, Percent_Identity=41.304347826087, Blast_Score=86, Evalue=1e-17, Organism=Homo sapiens, GI91823271, Length=142, Percent_Identity=38.0281690140845, Blast_Score=83, Evalue=1e-16, Organism=Escherichia coli, GI1786480, Length=162, Percent_Identity=44.4444444444444, Blast_Score=128, Evalue=2e-31, Organism=Escherichia coli, GI1789232, Length=141, Percent_Identity=46.0992907801418, Blast_Score=103, Evalue=4e-24, Organism=Caenorhabditis elegans, GI17540638, Length=139, Percent_Identity=39.568345323741, Blast_Score=119, Evalue=5e-28, Organism=Caenorhabditis elegans, GI17539860, Length=140, Percent_Identity=35.7142857142857, Blast_Score=96, Evalue=6e-21, Organism=Caenorhabditis elegans, GI32566215, Length=140, Percent_Identity=34.2857142857143, Blast_Score=94, Evalue=4e-20, Organism=Drosophila melanogaster, GI17737937, Length=168, Percent_Identity=34.5238095238095, Blast_Score=97, Evalue=6e-21, Organism=Drosophila melanogaster, GI24647199, Length=158, Percent_Identity=28.4810126582279, Blast_Score=70, Evalue=6e-13, Organism=Drosophila melanogaster, GI24647201, Length=136, Percent_Identity=30.1470588235294, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24647195, Length=141, Percent_Identity=34.0425531914894, Blast_Score=68, Evalue=2e-12, Organism=Drosophila melanogaster, GI24647197, Length=141, Percent_Identity=34.0425531914894, Blast_Score=68, Evalue=2e-12, Organism=Drosophila melanogaster, GI24647193, Length=164, Percent_Identity=28.6585365853659, Blast_Score=68, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002888 - InterPro: IPR006058 - InterPro: IPR012675 - InterPro: IPR001041 [H]
Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]
EC number: =1.3.99.16 [H]
Molecular weight: Translated: 17385; Mature: 17254
Theoretical pI: Translated: 6.47; Mature: 6.47
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 8.5 %Cys+Met (Translated Protein) 5.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSRVVTLGVNQVRRTLAVSAQVSLLEVLRNDLELNSPKYGCGLGECGACTVLVDGVAAR CCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH ACVIPACGVAGREITTLEGLGSLSALHPVQQAFIDEQAAQCGYCLSGMIMMTVALLARNP HHHHCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DPSEDEIRRELSGNLCRCGTHLEIVKAVRRAAELMAQNLSRGGAT CCCHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TSRVVTLGVNQVRRTLAVSAQVSLLEVLRNDLELNSPKYGCGLGECGACTVLVDGVAAR CCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH ACVIPACGVAGREITTLEGLGSLSALHPVQQAFIDEQAAQCGYCLSGMIMMTVALLARNP HHHHCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DPSEDEIRRELSGNLCRCGTHLEIVKAVRRAAELMAQNLSRGGAT CCCHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7782304; 8157655 [H]