| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789882
Identifier: 91789882
GI number: 91789882
Start: 4244337
End: 4245194
Strand: Direct
Name: 91789882
Synonym: Bpro_4043
Alternate gene names: NA
Gene position: 4244337-4245194 (Clockwise)
Preceding gene: 91789881
Following gene: 91789885
Centisome position: 81.62
GC content: 57.93
Gene sequence:
>858_bases ATGCGCCGTCTCGTCTGCTGCTCCAGTGTCTTTCTTGCTGCAGTTTTGGCCTTGCCGGCATGGAGCCAGGCCCCTGCTGC CGTGGAACCTGCCAGTCCTCCACTACTAGAACATATTTACCAGCAGATTGAGAAGCGAGAGCGCCCCACGCAGTTGCCAG GTCTGTCCACATCGGCAAATTCGGCGCTGGCATCCAGCTCTCTCATTGACTTCATGGGCACCCGTACCCAGTTGCGCCAA CTCGGACCCAAGGCGTATCCTCTTGCGCCCAGAATTGCGGAATTGCTGGCCAAGAGCGAGAAAAATCAATACGACCTCGC CTGGATACTGTTCGAAATGACGGTTCAGGAAGACGACAGCCAAGCCACCACGAACAACGCGATCGCCAGATACAGGGCCG AGAGCGGGTTTGGGAAGCTGGCGCAACTCGCAAAGCTAGGGAAAATCCGCTCATCGGCGGTGGTGCCTGAACTTCAGGCC GCCGCAACAGATTCCGCGCCGACTACCCGCTTGATGGCTATCATCGGGCTCGCCTATGCTGGCGCTTCAGTCCCCGACAA AGCCGCTGCGACCCTGGGGAAGGCGTTGAGCGACACCGAAAAGTTCAACCGTTCAGCCGCCGCAAACTCACTGCGCCTGT TGGGTAGCCGTGCCGAAACCGCGACTCCAGCCCTGATTGACTACCTGAAGACAAGAGACAACGTGTACCAGGCAGCAGGG GCCCTGAACCTGATGCCCATAGCGGCGGTCCGGCCTGCCAAACCCGAGCTGGAAAACATCCTCGGTGACAGCAAACTGAC TGAGTTTCAAAAGCGCGATGTGGTGAATTTGCTGGTACGCATGGAAAGCGAAAAATAA
Upstream 100 bases:
>100_bases TTGCGAACCGCATGCGTCGCTTCATGCATTTGATGGATGACACCTTGCCGCAACGCCTTTACATTAGATTTGCATTCATA CCAAAGGAGAGAGAAAAAGT
Downstream 100 bases:
>100_bases GCGCTTGTTTGCCGGGTAGCTCCACGGCAGGCTGCCCTGTCGGCTGCCGCCTCAAGGCGCAAAGCGGCGCGAGGCGATTT CCAGCAAGCCATCAAAAATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MRRLVCCSSVFLAAVLALPAWSQAPAAVEPASPPLLEHIYQQIEKRERPTQLPGLSTSANSALASSSLIDFMGTRTQLRQ LGPKAYPLAPRIAELLAKSEKNQYDLAWILFEMTVQEDDSQATTNNAIARYRAESGFGKLAQLAKLGKIRSSAVVPELQA AATDSAPTTRLMAIIGLAYAGASVPDKAAATLGKALSDTEKFNRSAAANSLRLLGSRAETATPALIDYLKTRDNVYQAAG ALNLMPIAAVRPAKPELENILGDSKLTEFQKRDVVNLLVRMESEK
Sequences:
>Translated_285_residues MRRLVCCSSVFLAAVLALPAWSQAPAAVEPASPPLLEHIYQQIEKRERPTQLPGLSTSANSALASSSLIDFMGTRTQLRQ LGPKAYPLAPRIAELLAKSEKNQYDLAWILFEMTVQEDDSQATTNNAIARYRAESGFGKLAQLAKLGKIRSSAVVPELQA AATDSAPTTRLMAIIGLAYAGASVPDKAAATLGKALSDTEKFNRSAAANSLRLLGSRAETATPALIDYLKTRDNVYQAAG ALNLMPIAAVRPAKPELENILGDSKLTEFQKRDVVNLLVRMESEK >Mature_285_residues MRRLVCCSSVFLAAVLALPAWSQAPAAVEPASPPLLEHIYQQIEKRERPTQLPGLSTSANSALASSSLIDFMGTRTQLRQ LGPKAYPLAPRIAELLAKSEKNQYDLAWILFEMTVQEDDSQATTNNAIARYRAESGFGKLAQLAKLGKIRSSAVVPELQA AATDSAPTTRLMAIIGLAYAGASVPDKAAATLGKALSDTEKFNRSAAANSLRLLGSRAETATPALIDYLKTRDNVYQAAG ALNLMPIAAVRPAKPELENILGDSKLTEFQKRDVVNLLVRMESEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30679; Mature: 30679
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRLVCCSSVFLAAVLALPAWSQAPAAVEPASPPLLEHIYQQIEKRERPTQLPGLSTSAN CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHH SALASSSLIDFMGTRTQLRQLGPKAYPLAPRIAELLAKSEKNQYDLAWILFEMTVQEDDS HHHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHEEEEEHHHHCCCCC QATTNNAIARYRAESGFGKLAQLAKLGKIRSSAVVPELQAAATDSAPTTRLMAIIGLAYA HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHH GASVPDKAAATLGKALSDTEKFNRSAAANSLRLLGSRAETATPALIDYLKTRDNVYQAAG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC ALNLMPIAAVRPAKPELENILGDSKLTEFQKRDVVNLLVRMESEK CCCCCCHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRRLVCCSSVFLAAVLALPAWSQAPAAVEPASPPLLEHIYQQIEKRERPTQLPGLSTSAN CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHH SALASSSLIDFMGTRTQLRQLGPKAYPLAPRIAELLAKSEKNQYDLAWILFEMTVQEDDS HHHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHEEEEEHHHHCCCCC QATTNNAIARYRAESGFGKLAQLAKLGKIRSSAVVPELQAAATDSAPTTRLMAIIGLAYA HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHH GASVPDKAAATLGKALSDTEKFNRSAAANSLRLLGSRAETATPALIDYLKTRDNVYQAAG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC ALNLMPIAAVRPAKPELENILGDSKLTEFQKRDVVNLLVRMESEK CCCCCCHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA