Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is yoaE [H]

Identifier: 91789872

GI number: 91789872

Start: 4232531

End: 4234648

Strand: Direct

Name: yoaE [H]

Synonym: Bpro_4032

Alternate gene names: 91789872

Gene position: 4232531-4234648 (Clockwise)

Preceding gene: 91789866

Following gene: 91789873

Centisome position: 81.39

GC content: 66.01

Gene sequence:

>2118_bases
ATGCGCAATACCATCAGCATCTCCCCTAGCGTTAGTTTCGTGCGGGCTGACAGTCAGACCGTCCAGGTGCGCGGCGCTTG
CCCGCATGACTGCCCCGACACCTGCTCGCTGCTGACGACCGTGGAAAACGGCGTGGCCGTCAAGGTGCACGGCAACCCCG
AGCACCCGCAAACCGGCGGCGTGCTGTGCAACAAGGTCTCACGCTACACCGAGCGCACCTACCACCCCGAGCGCCTGCTG
CAGCCGCAAAAGCGTGTGGGGCCCAAGGGCTCGGGCCAATTCGAGCCGGTGAGCTGGGAGGCGGCGCTCACCGACATTGC
CGCGCGCCTGAAGGCCATCGCCGCGCGCAACCCCGAGGCCATCGTGCCTTACAGCTACGCCGGCACCATGGGCCAGGTGC
AGAGCGAAAGCATGGCGGCGCGCTTCTTCAACCGTCTCGGCGCCTCGTTTCTGGACCGCACGATTTGCGCGACGGCGGGC
GGCGAAGGCTTCACGCAGACGCTGGGCGGCAAGGTCGGCATGCGGGTGGAGTTTTTTGCCGAATCGAAACTCATCATCAT
CTGGGGCAGCAACTCGATTGGCAGCAACCTGCATTTCTGGCGCTATGCGCAGCAGGCCAAACGCGATGGCGCCCGGCTGG
TGTGCATTGATCCGCGCAAGAGTGAGACCGCCGAAAAATGCCACGAACACATCGCGCTGCTGCCCGGCACCGACGCGGCG
CTGGCGCTGGCGCTGATGCACGAGCTGATCACCCACGACTGGCTGGACCATGACTATATTGCCCGCCACACGCTGGGCTG
GCAGGCGCTGAAGGAACGCGCGCTGCAATGGCCGCCCGAGCGCGCCGCCGAGGTGTGCCGCGTGCCGGTTGAGCAGATCA
GGGCCTTGGCCCGCGACTACGGCCAGTGTTTTACCGACCGGCAACCCGCGGCGATTCGCCTGAACTACGGCATGCAGCGC
GTGCGCGGCGGCGGCAATGCGGCCCGCGCGGTGGCCTGCCTGCCGGCGCTGATTGGCGCCTGGCGGCACCGCGCCGGCGG
CGTGCTGCTGAGCAGTTCAGGGCAGTTTCCGGTGGACAAGGCCGCGCTGCAACGGCCTGAACTGCTAGCCGGCCGCCAGC
CGCGAACCATCAACATGAGCACGATTGGCAATGCGCTGCTCGCAAAAACTTCCGCCCAGTTCGGCCCGAAAATCGAGGCG
CTGATCGTCTACAACAGCAACCCGGTGGCGGTCGCGCCCGAATCCGGCAAGGTGGTGCAGGGCTTTGCGCGTGAAGACCT
GTTCACCGTGGTACTGGAGCACTTCAAGACCGACACCGCCGACTACGCCGACTACCTGCTGCCCGCCACCACGCAGCTGG
AGCACTGGGATGTGCACAGCGCCTACGGCCACACCGACGCGCTGCTCAACCGCCCTGCCATCGCGCCGCTCGGCCTGGCC
AAGCCCAACACCCAGATCTTTCGCGAACTGGCGGCCCACATGGGCTTTATCGAGCCCTGCTTTTCCGAGGACGATGAGAC
CTTGTGCCGCACCGTCTATGGTGACAAGGTCGACTTCCGGCAACTGCTGGACAAGGGCTTTGTCACGCTGAATTTGCCCG
ATGCACCGTTCGCTGAGGGCAACTTTCCCACGCCATCGGGCCGCTGCGAGTTTTTCAGCGAGCGGCTGCAAGCCATGGGC
CTGGACGGCCTGCCCGACCACGTGCCCAACTACGAAACCCTGGGCACATCAGAGCAGTACCCGCTGGCCATGATCTCGCC
GCCCGCGCGCAACTTTCTCAACTCCAGCTTTGTCAATGTGAAAAGCCTGCGCAACATCGAGGGCGAGCCGGTGCTGGAGA
TGCATGCCGACGACGCGGCAGCGCGCGGCATCAGCAGCGGCGCCGTCGTCACGGTGTTCAATGCCCGCGGTGAATACCGC
GTCAAGGCCGAGGTGTCGGCGCGCGCCCGTCCCGGCGTGGTCAATGGCCTGGGCATCTGGTGGCGCAAGCTGGGGCTCGA
CGGCACCAACGTCAACCAGCTCACCAGCCAGCACCTGACCGACCTGGGCCGTGGGCCGGTGTTTTACGACTGCCTGGTTG
AAGTCCAGGCCGGCCAGCCCGGGGAGCCTGTGGTGTGA

Upstream 100 bases:

>100_bases
CCCGAGCCAGGGCTTTCAGCACTTGCCCGCCGTTTTTGATCACAGACATGAATTACCCTTTTCCTGATTGCCGATATGGC
TGTCAATATAGAGTTACACC

Downstream 100 bases:

>100_bases
AAACCCGGGTGGCCCAAGTGGCCCTCACCTGGCCCGCCATCCGGGCCACCGCCATGGCGGCCATCGCCGCCCTGGGCCTG
TCGGGCTGCACCGGTATCGG

Product: molybdopterin oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 705; Mature: 705

Protein sequence:

>705_residues
MRNTISISPSVSFVRADSQTVQVRGACPHDCPDTCSLLTTVENGVAVKVHGNPEHPQTGGVLCNKVSRYTERTYHPERLL
QPQKRVGPKGSGQFEPVSWEAALTDIAARLKAIAARNPEAIVPYSYAGTMGQVQSESMAARFFNRLGASFLDRTICATAG
GEGFTQTLGGKVGMRVEFFAESKLIIIWGSNSIGSNLHFWRYAQQAKRDGARLVCIDPRKSETAEKCHEHIALLPGTDAA
LALALMHELITHDWLDHDYIARHTLGWQALKERALQWPPERAAEVCRVPVEQIRALARDYGQCFTDRQPAAIRLNYGMQR
VRGGGNAARAVACLPALIGAWRHRAGGVLLSSSGQFPVDKAALQRPELLAGRQPRTINMSTIGNALLAKTSAQFGPKIEA
LIVYNSNPVAVAPESGKVVQGFAREDLFTVVLEHFKTDTADYADYLLPATTQLEHWDVHSAYGHTDALLNRPAIAPLGLA
KPNTQIFRELAAHMGFIEPCFSEDDETLCRTVYGDKVDFRQLLDKGFVTLNLPDAPFAEGNFPTPSGRCEFFSERLQAMG
LDGLPDHVPNYETLGTSEQYPLAMISPPARNFLNSSFVNVKSLRNIEGEPVLEMHADDAAARGISSGAVVTVFNARGEYR
VKAEVSARARPGVVNGLGIWWRKLGLDGTNVNQLTSQHLTDLGRGPVFYDCLVEVQAGQPGEPVV

Sequences:

>Translated_705_residues
MRNTISISPSVSFVRADSQTVQVRGACPHDCPDTCSLLTTVENGVAVKVHGNPEHPQTGGVLCNKVSRYTERTYHPERLL
QPQKRVGPKGSGQFEPVSWEAALTDIAARLKAIAARNPEAIVPYSYAGTMGQVQSESMAARFFNRLGASFLDRTICATAG
GEGFTQTLGGKVGMRVEFFAESKLIIIWGSNSIGSNLHFWRYAQQAKRDGARLVCIDPRKSETAEKCHEHIALLPGTDAA
LALALMHELITHDWLDHDYIARHTLGWQALKERALQWPPERAAEVCRVPVEQIRALARDYGQCFTDRQPAAIRLNYGMQR
VRGGGNAARAVACLPALIGAWRHRAGGVLLSSSGQFPVDKAALQRPELLAGRQPRTINMSTIGNALLAKTSAQFGPKIEA
LIVYNSNPVAVAPESGKVVQGFAREDLFTVVLEHFKTDTADYADYLLPATTQLEHWDVHSAYGHTDALLNRPAIAPLGLA
KPNTQIFRELAAHMGFIEPCFSEDDETLCRTVYGDKVDFRQLLDKGFVTLNLPDAPFAEGNFPTPSGRCEFFSERLQAMG
LDGLPDHVPNYETLGTSEQYPLAMISPPARNFLNSSFVNVKSLRNIEGEPVLEMHADDAAARGISSGAVVTVFNARGEYR
VKAEVSARARPGVVNGLGIWWRKLGLDGTNVNQLTSQHLTDLGRGPVFYDCLVEVQAGQPGEPVV
>Mature_705_residues
MRNTISISPSVSFVRADSQTVQVRGACPHDCPDTCSLLTTVENGVAVKVHGNPEHPQTGGVLCNKVSRYTERTYHPERLL
QPQKRVGPKGSGQFEPVSWEAALTDIAARLKAIAARNPEAIVPYSYAGTMGQVQSESMAARFFNRLGASFLDRTICATAG
GEGFTQTLGGKVGMRVEFFAESKLIIIWGSNSIGSNLHFWRYAQQAKRDGARLVCIDPRKSETAEKCHEHIALLPGTDAA
LALALMHELITHDWLDHDYIARHTLGWQALKERALQWPPERAAEVCRVPVEQIRALARDYGQCFTDRQPAAIRLNYGMQR
VRGGGNAARAVACLPALIGAWRHRAGGVLLSSSGQFPVDKAALQRPELLAGRQPRTINMSTIGNALLAKTSAQFGPKIEA
LIVYNSNPVAVAPESGKVVQGFAREDLFTVVLEHFKTDTADYADYLLPATTQLEHWDVHSAYGHTDALLNRPAIAPLGLA
KPNTQIFRELAAHMGFIEPCFSEDDETLCRTVYGDKVDFRQLLDKGFVTLNLPDAPFAEGNFPTPSGRCEFFSERLQAMG
LDGLPDHVPNYETLGTSEQYPLAMISPPARNFLNSSFVNVKSLRNIEGEPVLEMHADDAAARGISSGAVVTVFNARGEYR
VKAEVSARARPGVVNGLGIWWRKLGLDGTNVNQLTSQHLTDLGRGPVFYDCLVEVQAGQPGEPVV

Specific function: Terminal Reductase During Anaerobic Growth On Various Sulfoxide And N-Oxide Compounds (By Similarity). [C]

COG id: COG0243

COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing

Gene ontology:

Cell location: Cytoplasm Face Of The Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI171474008, Length=783, Percent_Identity=25.4150702426565, Blast_Score=171, Evalue=1e-43,
Organism=Escherichia coli, GI87081797, Length=785, Percent_Identity=25.9872611464968, Blast_Score=169, Evalue=5e-43,
Organism=Escherichia coli, GI1787870, Length=772, Percent_Identity=24.8704663212435, Blast_Score=167, Evalue=3e-42,
Organism=Escherichia coli, GI3868721, Length=721, Percent_Identity=25.7975034674064, Blast_Score=157, Evalue=2e-39,
Organism=Escherichia coli, GI145693196, Length=655, Percent_Identity=24.7328244274809, Blast_Score=126, Evalue=6e-30,
Organism=Escherichia coli, GI87081994, Length=682, Percent_Identity=24.1935483870968, Blast_Score=109, Evalue=7e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR006657
- InterPro:   IPR006656
- InterPro:   IPR006963
- InterPro:   IPR006655 [H]

Pfam domain/function: PF04879 Molybdop_Fe4S4; PF00384 Molybdopterin; PF01568 Molydop_binding [H]

EC number: 1.8.99.- [C]

Molecular weight: Translated: 77040; Mature: 77040

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: PS00490 MOLYBDOPTERIN_PROK_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNTISISPSVSFVRADSQTVQVRGACPHDCPDTCSLLTTVENGVAVKVHGNPEHPQTGG
CCCEEECCCCEEEEECCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCC
VLCNKVSRYTERTYHPERLLQPQKRVGPKGSGQFEPVSWEAALTDIAARLKAIAARNPEA
HHHHHHHHHHHHCCCHHHHCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCE
IVPYSYAGTMGQVQSESMAARFFNRLGASFLDRTICATAGGEGFTQTLGGKVGMRVEFFA
EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCEEEEEE
ESKLIIIWGSNSIGSNLHFWRYAQQAKRDGARLVCIDPRKSETAEKCHEHIALLPGTDAA
CCEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCEEECCCCHHH
LALALMHELITHDWLDHDYIARHTLGWQALKERALQWPPERAAEVCRVPVEQIRALARDY
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHH
GQCFTDRQPAAIRLNYGMQRVRGGGNAARAVACLPALIGAWRHRAGGVLLSSSGQFPVDK
HHHHCCCCCCEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHH
AALQRPELLAGRQPRTINMSTIGNALLAKTSAQFGPKIEALIVYNSNPVAVAPESGKVVQ
HHHCCCHHHCCCCCCEEEHHHHCCHHHHHCCHHCCCCEEEEEEECCCCEEECCCCCCHHH
GFAREDLFTVVLEHFKTDTADYADYLLPATTQLEHWDVHSAYGHTDALLNRPAIAPLGLA
HHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCHHHCCCHHHHHCCCCCCCCCCC
KPNTQIFRELAAHMGFIEPCFSEDDETLCRTVYGDKVDFRQLLDKGFVTLNLPDAPFAEG
CCCHHHHHHHHHHCCCCCHHCCCCHHHHHHHHCCCCHHHHHHHHCCCEEEECCCCCCCCC
NFPTPSGRCEFFSERLQAMGLDGLPDHVPNYETLGTSEQYPLAMISPPARNFLNSSFVNV
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHCCCHHHH
KSLRNIEGEPVLEMHADDAAARGISSGAVVTVFNARGEYRVKAEVSARARPGVVNGLGIW
HHHHCCCCCCEEEECCCHHHHCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCHHHHH
WRKLGLDGTNVNQLTSQHLTDLGRGPVFYDCLVEVQAGQPGEPVV
HHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCC
>Mature Secondary Structure
MRNTISISPSVSFVRADSQTVQVRGACPHDCPDTCSLLTTVENGVAVKVHGNPEHPQTGG
CCCEEECCCCEEEEECCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCC
VLCNKVSRYTERTYHPERLLQPQKRVGPKGSGQFEPVSWEAALTDIAARLKAIAARNPEA
HHHHHHHHHHHHCCCHHHHCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCE
IVPYSYAGTMGQVQSESMAARFFNRLGASFLDRTICATAGGEGFTQTLGGKVGMRVEFFA
EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCEEEEEE
ESKLIIIWGSNSIGSNLHFWRYAQQAKRDGARLVCIDPRKSETAEKCHEHIALLPGTDAA
CCEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCEEECCCCHHH
LALALMHELITHDWLDHDYIARHTLGWQALKERALQWPPERAAEVCRVPVEQIRALARDY
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHH
GQCFTDRQPAAIRLNYGMQRVRGGGNAARAVACLPALIGAWRHRAGGVLLSSSGQFPVDK
HHHHCCCCCCEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHH
AALQRPELLAGRQPRTINMSTIGNALLAKTSAQFGPKIEALIVYNSNPVAVAPESGKVVQ
HHHCCCHHHCCCCCCEEEHHHHCCHHHHHCCHHCCCCEEEEEEECCCCEEECCCCCCHHH
GFAREDLFTVVLEHFKTDTADYADYLLPATTQLEHWDVHSAYGHTDALLNRPAIAPLGLA
HHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCHHHCCCHHHHHCCCCCCCCCCC
KPNTQIFRELAAHMGFIEPCFSEDDETLCRTVYGDKVDFRQLLDKGFVTLNLPDAPFAEG
CCCHHHHHHHHHHCCCCCHHCCCCHHHHHHHHCCCCHHHHHHHHCCCEEEECCCCCCCCC
NFPTPSGRCEFFSERLQAMGLDGLPDHVPNYETLGTSEQYPLAMISPPARNFLNSSFVNV
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHCCCHHHH
KSLRNIEGEPVLEMHADDAAARGISSGAVVTVFNARGEYRVKAEVSARARPGVVNGLGIW
HHHHCCCCCCEEEECCCHHHHCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCHHHHH
WRKLGLDGTNVNQLTSQHLTDLGRGPVFYDCLVEVQAGQPGEPVV
HHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: May Bind 4Fe-4S Cluster. [C]

Metal ions: Fe; Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]