Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91789873

Identifier: 91789873

GI number: 91789873

Start: 4234645

End: 4235754

Strand: Direct

Name: 91789873

Synonym: Bpro_4033

Alternate gene names: NA

Gene position: 4234645-4235754 (Clockwise)

Preceding gene: 91789872

Following gene: 91789874

Centisome position: 81.43

GC content: 65.95

Gene sequence:

>1110_bases
GTGAAAACCCGGGTGGCCCAAGTGGCCCTCACCTGGCCCGCCATCCGGGCCACCGCCATGGCGGCCATCGCCGCCCTGGG
CCTGTCGGGCTGCACCGGTATCGGCTACTACTGGCAGTCGGTCAGCGGCCACCTGCAGATGATGAACGCGGCACGCCCGG
TCAGCGACTGGCTGGACGATGCGCAAACCCCCGAGCAGCTCAAAACCCGGCTGGCCCTGAGCCAGCGCATCCGCAGCTTT
GCCGCGAGCGAGCTAAAACTGCCCGACAACGCCAGCTACCGCCGCTATGCCGACCTGCAGCGCCGGGCCGTGGTGTGGAA
CGTGGTGGCGGCCCCCGAGTTGTCGCTCACCCTCAAGACCTGGTGCTTTCCAGTGGCGGGCTGCGTGGGCTACCGCGGTT
ATTTTGACGAAGCCGAGGCGCGCGCTGAAGCAGCGCGGCTGCAAACCGCGGGGCTGGAGGCCGGCGTCTTCGGCGTGCCG
GCCTACTCCACGCTGGGCTGGCTGAACTGGGCCGGCGGCGATCCGCTGCTCAACACCTTCATCGCCTACCCCGAAGGCGA
GCTGGCCCGGCTGATCATTCATGAACTGGCGCACCAGGTGGTCTACGCCCAGGATGACACCATGTTCAACGAATCATTTG
CGACGGCGGTGGAACGGCTGGGCAGCCAGCGCTGGCTCGCCACCCAGGCCAGCCCGGCGGCCCGGGCCGAGTACGCGGCC
TTTGACAGTCGGCGCCAGCAGTTCCGGGCGCTGGTGCGGGCCACGCGGCACAGGCTGGATGCAATTTACGATTTGAATTG
GGCGCCAGCGCCCGCCAGAGCCGCGCAAGTTGCGATGAAAAGCATCGCTATTTCAGATTTCAAGCAACAGTATGAGCAAC
TCAAAACCAGCTGGGGCGGCTTCGCCGGCTACGACCCCTGGGTCGCCCAGGCCAACAACGCCGCGTTTGGCGCGCAGGCC
GCCTATGACGAACTGGTGCCCGGCTTTGAGGCGCTGTTCAAGCGCGAAGGCGGCGACTGGCGGCGGTTTTATGATGCGGT
GAAGCGACTGGCCAGCCTGTCCAAAGAAGAACGGCACCAGGCTCTTGCGACCCATAACACCGATAAATAA

Upstream 100 bases:

>100_bases
ACCAGCTCACCAGCCAGCACCTGACCGACCTGGGCCGTGGGCCGGTGTTTTACGACTGCCTGGTTGAAGTCCAGGCCGGC
CAGCCCGGGGAGCCTGTGGT

Downstream 100 bases:

>100_bases
ACCAACAAGCAAGCAAGGAGACGCCCATGGCAGAGATTCACATCCATCGCCAGCACGGCTTGAACCTGGCGCAGGCGCGC
AAGATGGCCTTTCAGTGGGC

Product: putative zinc protease

Products: NA

Alternate protein names: Aminopeptidase; Aminopeptidase-Like Protein; Lipoprotein

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MKTRVAQVALTWPAIRATAMAAIAALGLSGCTGIGYYWQSVSGHLQMMNAARPVSDWLDDAQTPEQLKTRLALSQRIRSF
AASELKLPDNASYRRYADLQRRAVVWNVVAAPELSLTLKTWCFPVAGCVGYRGYFDEAEARAEAARLQTAGLEAGVFGVP
AYSTLGWLNWAGGDPLLNTFIAYPEGELARLIIHELAHQVVYAQDDTMFNESFATAVERLGSQRWLATQASPAARAEYAA
FDSRRQQFRALVRATRHRLDAIYDLNWAPAPARAAQVAMKSIAISDFKQQYEQLKTSWGGFAGYDPWVAQANNAAFGAQA
AYDELVPGFEALFKREGGDWRRFYDAVKRLASLSKEERHQALATHNTDK

Sequences:

>Translated_369_residues
MKTRVAQVALTWPAIRATAMAAIAALGLSGCTGIGYYWQSVSGHLQMMNAARPVSDWLDDAQTPEQLKTRLALSQRIRSF
AASELKLPDNASYRRYADLQRRAVVWNVVAAPELSLTLKTWCFPVAGCVGYRGYFDEAEARAEAARLQTAGLEAGVFGVP
AYSTLGWLNWAGGDPLLNTFIAYPEGELARLIIHELAHQVVYAQDDTMFNESFATAVERLGSQRWLATQASPAARAEYAA
FDSRRQQFRALVRATRHRLDAIYDLNWAPAPARAAQVAMKSIAISDFKQQYEQLKTSWGGFAGYDPWVAQANNAAFGAQA
AYDELVPGFEALFKREGGDWRRFYDAVKRLASLSKEERHQALATHNTDK
>Mature_369_residues
MKTRVAQVALTWPAIRATAMAAIAALGLSGCTGIGYYWQSVSGHLQMMNAARPVSDWLDDAQTPEQLKTRLALSQRIRSF
AASELKLPDNASYRRYADLQRRAVVWNVVAAPELSLTLKTWCFPVAGCVGYRGYFDEAEARAEAARLQTAGLEAGVFGVP
AYSTLGWLNWAGGDPLLNTFIAYPEGELARLIIHELAHQVVYAQDDTMFNESFATAVERLGSQRWLATQASPAARAEYAA
FDSRRQQFRALVRATRHRLDAIYDLNWAPAPARAAQVAMKSIAISDFKQQYEQLKTSWGGFAGYDPWVAQANNAAFGAQA
AYDELVPGFEALFKREGGDWRRFYDAVKRLASLSKEERHQALATHNTDK

Specific function: Unknown

COG id: COG4324

COG function: function code R; Predicted aminopeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40923; Mature: 40923

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTRVAQVALTWPAIRATAMAAIAALGLSGCTGIGYYWQSVSGHLQMMNAARPVSDWLDD
CCCCHHEHEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHC
AQTPEQLKTRLALSQRIRSFAASELKLPDNASYRRYADLQRRAVVWNVVAAPELSLTLKT
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHEEEEECCCCHHHHHH
WCFPVAGCVGYRGYFDEAEARAEAARLQTAGLEAGVFGVPAYSTLGWLNWAGGDPLLNTF
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHH
IAYPEGELARLIIHELAHQVVYAQDDTMFNESFATAVERLGSQRWLATQASPAARAEYAA
HCCCCHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHH
FDSRRQQFRALVRATRHRLDAIYDLNWAPAPARAAQVAMKSIAISDFKQQYEQLKTSWGG
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
FAGYDPWVAQANNAAFGAQAAYDELVPGFEALFKREGGDWRRFYDAVKRLASLSKEERHQ
CCCCCCHHHCCCCCCCCHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHH
ALATHNTDK
HHHHCCCCC
>Mature Secondary Structure
MKTRVAQVALTWPAIRATAMAAIAALGLSGCTGIGYYWQSVSGHLQMMNAARPVSDWLDD
CCCCHHEHEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHC
AQTPEQLKTRLALSQRIRSFAASELKLPDNASYRRYADLQRRAVVWNVVAAPELSLTLKT
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHEEEEECCCCHHHHHH
WCFPVAGCVGYRGYFDEAEARAEAARLQTAGLEAGVFGVPAYSTLGWLNWAGGDPLLNTF
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHH
IAYPEGELARLIIHELAHQVVYAQDDTMFNESFATAVERLGSQRWLATQASPAARAEYAA
HCCCCHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHH
FDSRRQQFRALVRATRHRLDAIYDLNWAPAPARAAQVAMKSIAISDFKQQYEQLKTSWGG
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
FAGYDPWVAQANNAAFGAQAAYDELVPGFEALFKREGGDWRRFYDAVKRLASLSKEERHQ
CCCCCCHHHCCCCCCCCHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHH
ALATHNTDK
HHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA