| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789864
Identifier: 91789864
GI number: 91789864
Start: 4223677
End: 4224183
Strand: Direct
Name: 91789864
Synonym: Bpro_4024
Alternate gene names: NA
Gene position: 4223677-4224183 (Clockwise)
Preceding gene: 91789855
Following gene: 91789865
Centisome position: 81.22
GC content: 58.19
Gene sequence:
>507_bases ATGGTCAAGAAACTGCAAAAAATGAGTGCCGACAAAAAAGCGGCTCCGCCATTGGCCAGCGCCGTCAAAGAGTCCGCCCA GCAAATCTGGCTGGCCGGGCTGGGGGCTTTCTCCAAGGCGCAGGAAGAAGGCGGCAAGGTGTTTGAGACCCTGGTCAAGG AAGGCCTGACGATCCAGCGCAAGACGCAAGCGGCTGCTGAAGAAAAAATTACCGAAGCCACCAGCAAAATGGCCAACATG GCCACCGACATCCAGTCCAAGGCCGGCCATCAGTGGGACAAGCTGGAGAATATTTTTGAAGAACGCGTGGCCAAAGCCCT GAACAAACTCGGCGTGCCCTCTGCCAAAGACGTGGACGCCCTGGCAGCGCGCATTGACGAACTCAACAAGAGCATGCAAA AAATGAACGGCAAGGCACCTGCCGCCAGGAAAGCCGCAAAACCGGCTGCCAAAAAAGCAGCCAGGCCGGCAGCCGCCAAG CGCCCCGCCGCACGCAAGTCCGCTTAA
Upstream 100 bases:
>100_bases CGGCATCTAAACTCTGGCGCCTGAAGGCCTTATATTTTGCAGTGTGCGCAGTACACCCACCGCGCAGCACCTCATATCCA CCATCAGCATGGAGACAATC
Downstream 100 bases:
>100_bases GGACCCGATGCTGTCGGCGCTGTAAAAAAAAGGGACACCAGTCCTTTTTTTTTACGCCTGTTCGTGTGCCCGCTCGCGTT TTGGCGGATCCGGTCCAATA
Product: poly granule associated
Products: NA
Alternate protein names: Poly(Hydroxyalcanoate) Granule Associated Protein; Polyhydroxyalkanoate Synthesis Protein PhaF; Polyhydroxyalkanoate Granule-Associated Protein PhaI; Poly Granule Associated Protein; Transcriptional Regulatory Protein; Polyhydroxyalkanoate Biosynthesis-Like Protein; Poly Granule Associated Family Protein; Polyhydroxyalkanoate Granule-Associated Protein PhaF; Polyhydroxyalcanoate_granule_associated_protein; Protein Associated With Polyhydroxyalkanoate Inclusion; Polygranule-Associated Protein
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MVKKLQKMSADKKAAPPLASAVKESAQQIWLAGLGAFSKAQEEGGKVFETLVKEGLTIQRKTQAAAEEKITEATSKMANM ATDIQSKAGHQWDKLENIFEERVAKALNKLGVPSAKDVDALAARIDELNKSMQKMNGKAPAARKAAKPAAKKAARPAAAK RPAARKSA
Sequences:
>Translated_168_residues MVKKLQKMSADKKAAPPLASAVKESAQQIWLAGLGAFSKAQEEGGKVFETLVKEGLTIQRKTQAAAEEKITEATSKMANM ATDIQSKAGHQWDKLENIFEERVAKALNKLGVPSAKDVDALAARIDELNKSMQKMNGKAPAARKAAKPAAKKAARPAAAK RPAARKSA >Mature_168_residues MVKKLQKMSADKKAAPPLASAVKESAQQIWLAGLGAFSKAQEEGGKVFETLVKEGLTIQRKTQAAAEEKITEATSKMANM ATDIQSKAGHQWDKLENIFEERVAKALNKLGVPSAKDVDALAARIDELNKSMQKMNGKAPAARKAAKPAAKKAARPAAAK RPAARKSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17920; Mature: 17920
Theoretical pI: Translated: 10.86; Mature: 10.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKKLQKMSADKKAAPPLASAVKESAQQIWLAGLGAFSKAQEEGGKVFETLVKEGLTIQR CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH KTQAAAEEKITEATSKMANMATDIQSKAGHQWDKLENIFEERVAKALNKLGVPSAKDVDA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHH LAARIDELNKSMQKMNGKAPAARKAAKPAAKKAARPAAAKRPAARKSA HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHCCCCCCCC >Mature Secondary Structure MVKKLQKMSADKKAAPPLASAVKESAQQIWLAGLGAFSKAQEEGGKVFETLVKEGLTIQR CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH KTQAAAEEKITEATSKMANMATDIQSKAGHQWDKLENIFEERVAKALNKLGVPSAKDVDA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHH LAARIDELNKSMQKMNGKAPAARKAAKPAAKKAARPAAAKRPAARKSA HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA