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The map label for this gene is ykcC [H]

Identifier: 91789847

GI number: 91789847

Start: 4204918

End: 4205901

Strand: Direct

Name: ykcC [H]

Synonym: Bpro_4007

Alternate gene names: 91789847

Gene position: 4204918-4205901 (Clockwise)

Preceding gene: 91789846

Following gene: 91789848

Centisome position: 80.86

GC content: 45.83

Gene sequence:

>984_bases
GTGACCCCAAAAAAACTAATCTCGCTCATTATTCCTGTCTTCAATGAAGAAGAGAATATCTTTCCCCTTTACAAGGCAGT
GACCCCTATCATCAACGAATGTGCAGACCGTTATGACTTTGAGCTGATCTTTACAGACAACCACAGCACCGACAGTACAT
TTGAAAAACTCACCGAACTTAGTCAGCATGATTCACGCGTACGTGTATTCCGTTTTTCTCGTAACTTTGGGTACCAAAAG
TCCATCCTGACCGGCTACCTGAAAGCGCGTGGTGATGCGCTTATCCAGCTTGATTGCGACTTGCAGGATCCGCCGGACCT
CATTCTTGAGTTTCTGAAGCATTGGGAAGATGGTTGCGCCGTGGTATATGGAGTACGTCTAAGTCGCCGGGAAAATGCGG
TTCTGCACTACTCGCGAAAACTATTTTATCGACTTGCCAATTATCTGAGTGAAGACGACCTGCCAGTAGATGTTGGCGAT
TTTAGGCTAATTGATAGAAAAGTAGTGGATGTGCTGCGTCAAACTGACGATATGCAACCTTATCTGCGCGGAATGATTGC
AGCAATGGGATTCCAACAACGTGGGATTAATTACCACCGACGTGGCCGTGAGCGTGGCAAGAGTAATTTCCGACTCAAAG
ACTTGGTGGGGCTCGCGTTAGATGGAATTCTTAATCATTCAATTATCCCGTTACGCCTGGCTACCTTCTTCGGGGCGGGA
GTGTCCATCCTGACGGTTCTTGGTATTTTTGCTTACGGCATAGGTAAGTTAATATTTGGCTTTAATTGGCCGGCAGGGTT
TACCACGCTAACTATTTTAGTGCTAGCCGGCATAAGTCTGAATGCATTATTTCTAGGCATTATTGGAGAATATCTCGGGC
GAATTTACCAGCAGGTAAAGAGAAAGCCTTTGGTCATTGTTGAAGCCGAGCTTGATGGCCATAGTGCCAGACATGATGGA
CTGGAAAAAATACATGCAAGGTAA

Upstream 100 bases:

>100_bases
CTTGGGTGGATACCGCGGGTTGGCATCGAAGCGGGAATACGGACAGTGATCGAGGATATCGGTCAACGGGCAATAAAAAC
TACATAGAAGTGGAATCGAA

Downstream 100 bases:

>100_bases
TATTAAGTTGGCTTTTCAACGCATTTGTCGGCAGCTATCAAATAACAATGAAAGAGTTAAATTCTTTGCATTAGCATTAA
TTTTCTCGACTGTATTTTTC

Product: glycosyl transferase family protein

Products: GDP; dolichyl D-mannosyl phosphate

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 326

Protein sequence:

>327_residues
MTPKKLISLIIPVFNEEENIFPLYKAVTPIINECADRYDFELIFTDNHSTDSTFEKLTELSQHDSRVRVFRFSRNFGYQK
SILTGYLKARGDALIQLDCDLQDPPDLILEFLKHWEDGCAVVYGVRLSRRENAVLHYSRKLFYRLANYLSEDDLPVDVGD
FRLIDRKVVDVLRQTDDMQPYLRGMIAAMGFQQRGINYHRRGRERGKSNFRLKDLVGLALDGILNHSIIPLRLATFFGAG
VSILTVLGIFAYGIGKLIFGFNWPAGFTTLTILVLAGISLNALFLGIIGEYLGRIYQQVKRKPLVIVEAELDGHSARHDG
LEKIHAR

Sequences:

>Translated_327_residues
MTPKKLISLIIPVFNEEENIFPLYKAVTPIINECADRYDFELIFTDNHSTDSTFEKLTELSQHDSRVRVFRFSRNFGYQK
SILTGYLKARGDALIQLDCDLQDPPDLILEFLKHWEDGCAVVYGVRLSRRENAVLHYSRKLFYRLANYLSEDDLPVDVGD
FRLIDRKVVDVLRQTDDMQPYLRGMIAAMGFQQRGINYHRRGRERGKSNFRLKDLVGLALDGILNHSIIPLRLATFFGAG
VSILTVLGIFAYGIGKLIFGFNWPAGFTTLTILVLAGISLNALFLGIIGEYLGRIYQQVKRKPLVIVEAELDGHSARHDG
LEKIHAR
>Mature_326_residues
TPKKLISLIIPVFNEEENIFPLYKAVTPIINECADRYDFELIFTDNHSTDSTFEKLTELSQHDSRVRVFRFSRNFGYQKS
ILTGYLKARGDALIQLDCDLQDPPDLILEFLKHWEDGCAVVYGVRLSRRENAVLHYSRKLFYRLANYLSEDDLPVDVGDF
RLIDRKVVDVLRQTDDMQPYLRGMIAAMGFQQRGINYHRRGRERGKSNFRLKDLVGLALDGILNHSIIPLRLATFFGAGV
SILTVLGIFAYGIGKLIFGFNWPAGFTTLTILVLAGISLNALFLGIIGEYLGRIYQQVKRKPLVIVEAELDGHSARHDGL
EKIHAR

Specific function: Involved In O Antigen Modification. Catalyzes The Transfer Of The Glucose Residue From Udp-Glucose To A Lipid Carrier (By Similarity). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. GtrB subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788692, Length=309, Percent_Identity=34.3042071197411, Blast_Score=169, Evalue=3e-43,
Organism=Escherichia coli, GI1788588, Length=319, Percent_Identity=29.4670846394984, Blast_Score=129, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.4.1.83

Molecular weight: Translated: 37298; Mature: 37166

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPKKLISLIIPVFNEEENIFPLYKAVTPIINECADRYDFELIFTDNHSTDSTFEKLTEL
CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHH
SQHDSRVRVFRFSRNFGYQKSILTGYLKARGDALIQLDCDLQDPPDLILEFLKHWEDGCA
HHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCCE
VVYGVRLSRRENAVLHYSRKLFYRLANYLSEDDLPVDVGDFRLIDRKVVDVLRQTDDMQP
EEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCH
YLRGMIAAMGFQQRGINYHRRGRERGKSNFRLKDLVGLALDGILNHSIIPLRLATFFGAG
HHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCH
VSILTVLGIFAYGIGKLIFGFNWPAGFTTLTILVLAGISLNALFLGIIGEYLGRIYQQVK
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC
RKPLVIVEAELDGHSARHDGLEKIHAR
CCCEEEEEECCCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
TPKKLISLIIPVFNEEENIFPLYKAVTPIINECADRYDFELIFTDNHSTDSTFEKLTEL
CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHH
SQHDSRVRVFRFSRNFGYQKSILTGYLKARGDALIQLDCDLQDPPDLILEFLKHWEDGCA
HHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCCE
VVYGVRLSRRENAVLHYSRKLFYRLANYLSEDDLPVDVGDFRLIDRKVVDVLRQTDDMQP
EEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCH
YLRGMIAAMGFQQRGINYHRRGRERGKSNFRLKDLVGLALDGILNHSIIPLRLATFFGAG
HHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCH
VSILTVLGIFAYGIGKLIFGFNWPAGFTTLTILVLAGISLNALFLGIIGEYLGRIYQQVK
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC
RKPLVIVEAELDGHSARHDGLEKIHAR
CCCEEEEEECCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GDPmannose; dolichyl phosphate

Specific reaction: GDP-mannose + dolichyl phosphate = GDP + dolichyl D-mannosyl phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]