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The map label for this gene is ycjD [H]

Identifier: 91789794

GI number: 91789794

Start: 4145139

End: 4145627

Strand: Reverse

Name: ycjD [H]

Synonym: Bpro_3954

Alternate gene names: 91789794

Gene position: 4145627-4145139 (Counterclockwise)

Preceding gene: 91789795

Following gene: 91789793

Centisome position: 79.72

GC content: 57.67

Gene sequence:

>489_bases
GTGACAACTGAACAGAACTTATCCGGCGCGCCTGATTCAGGTTCCCTCTCCCGCACGCGGGAGAGGGCTAGGGTGAGGGC
AAGAGCGCTTCGCCAAGGTCAAACGGATGCCGAGATATTGCTGTGGTCAAAGTTGAGAGGTCGCCAGGTCAGAGATCTGA
AGTTTCGGCGTCAACATCCGATTGGTCCGTATTTCGCTGACTTCGCATGTCTTGAAATAGGCTTGGTCATTGAACTGGAT
GGCGGCCAGCATGCTGAGGGCGATGCCACCAGTTATGACCAGAAGCGCAGTAGCGACATGGCTGCCCTGGGTTTTCAGAC
CTTGCGATTCTGGAACAACGACGTCCTGAGCAAGACAGAGGCTGTACTGGAAAAGGTATGGCAAGTAGCCGACACCCTCA
CCCCAGCCCTCTCCCGCAAGCGGGCGAGGGAGCAAGAAGGCCCCGAATCCTGTACCCAGTCCCCTCTCCCGCTGGCGGGA
GAGGGTTAG

Upstream 100 bases:

>100_bases
TGTGGCGGTCACGGTGACTGACGAAGCTGGCGTCAACCCGGTCGAGTGCGAGTTTGTCTGGGCCTGGATTCCGTCCGGTC
CGCGAAAGTGACAACCAGTC

Downstream 100 bases:

>100_bases
GGTGAGGGCAGCAGCCTTTGTCCTACCAAGCCAACTTATTGAGAAACAAGGAACTACCCATGAAACAAGTCCAGGAAGCC
TACATCGTTGCCGCCACGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MTTEQNLSGAPDSGSLSRTRERARVRARALRQGQTDAEILLWSKLRGRQVRDLKFRRQHPIGPYFADFACLEIGLVIELD
GGQHAEGDATSYDQKRSSDMAALGFQTLRFWNNDVLSKTEAVLEKVWQVADTLTPALSRKRAREQEGPESCTQSPLPLAG
EG

Sequences:

>Translated_162_residues
MTTEQNLSGAPDSGSLSRTRERARVRARALRQGQTDAEILLWSKLRGRQVRDLKFRRQHPIGPYFADFACLEIGLVIELD
GGQHAEGDATSYDQKRSSDMAALGFQTLRFWNNDVLSKTEAVLEKVWQVADTLTPALSRKRAREQEGPESCTQSPLPLAG
EG
>Mature_161_residues
TTEQNLSGAPDSGSLSRTRERARVRARALRQGQTDAEILLWSKLRGRQVRDLKFRRQHPIGPYFADFACLEIGLVIELDG
GQHAEGDATSYDQKRSSDMAALGFQTLRFWNNDVLSKTEAVLEKVWQVADTLTPALSRKRAREQEGPESCTQSPLPLAGE
G

Specific function: Unknown

COG id: COG2852

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1162 and to HI_0925 [H]

Homologues:

Organism=Escherichia coli, GI1787546, Length=116, Percent_Identity=43.9655172413793, Blast_Score=103, Evalue=5e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004603
- InterPro:   IPR007569
- InterPro:   IPR011335 [H]

Pfam domain/function: PF04480 DUF559 [H]

EC number: NA

Molecular weight: Translated: 18056; Mature: 17925

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTEQNLSGAPDSGSLSRTRERARVRARALRQGQTDAEILLWSKLRGRQVRDLKFRRQHP
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHCCC
IGPYFADFACLEIGLVIELDGGQHAEGDATSYDQKRSSDMAALGFQTLRFWNNDVLSKTE
CCCHHHHHHHHHHCEEEEECCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHCCHHHHHHH
AVLEKVWQVADTLTPALSRKRAREQEGPESCTQSPLPLAGEG
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TTEQNLSGAPDSGSLSRTRERARVRARALRQGQTDAEILLWSKLRGRQVRDLKFRRQHP
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHCCC
IGPYFADFACLEIGLVIELDGGQHAEGDATSYDQKRSSDMAALGFQTLRFWNNDVLSKTE
CCCHHHHHHHHHHCEEEEECCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHCCHHHHHHH
AVLEKVWQVADTLTPALSRKRAREQEGPESCTQSPLPLAGEG
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 8075395; 1364817 [H]