| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789795
Identifier: 91789795
GI number: 91789795
Start: 4145637
End: 4146149
Strand: Reverse
Name: 91789795
Synonym: Bpro_3955
Alternate gene names: NA
Gene position: 4146149-4145637 (Counterclockwise)
Preceding gene: 91789796
Following gene: 91789794
Centisome position: 79.73
GC content: 62.38
Gene sequence:
>513_bases ATGACTGATTTGACGAAGACATCTCCTAACCGCCTGGAGCGCCAGCTCGAGCGCCTGTCTGAGGTGCCGGCCTTTGCCCG CACCTGGTTTCGCAGCGTGATCCTGCGCCGCGCCGTGCCTTTCACCGGCACGGCCGGGCTGGACTTTTTGCAGATGAGCA ACAACCGGGTTGAAATCGGCATCCAGAACCAGAAGAAGGTGCAGAACCACATCGGCGGCGTGCATGCCTCGGCCATGAAC CTGCTGGCGGAAACCGCCACCGGCATGGTGGTCGGTATGAACGTGCGAGACGACTGCATCCCGTTGGCCAAGGAGCTGAA GATGGCGTTCAAAAAGCGCGCAACCGGCTCGTTGCGCGCCGTGGCGACGCTCACCGACGAGCAGCGAGCGGCCATGCAGG CCAGTGATAAGGGCGAAGTCAATGTGGCGGTCACGGTGACTGACGAAGCTGGCGTCAACCCGGTCGAGTGCGAGTTTGTC TGGGCCTGGATTCCGTCCGGTCCGCGAAAGTGA
Upstream 100 bases:
>100_bases TGACGCTGGAACGCAAGGCCTTCTGTTCGCTGCTCGAAAACCCGAAAACGCAGGAACGCATCATGGGCATGATGAGCACC GGCAAACCGGTGAGGAATTG
Downstream 100 bases:
>100_bases CAACCAGTCGTGACAACTGAACAGAACTTATCCGGCGCGCCTGATTCAGGTTCCCTCTCCCGCACGCGGGAGAGGGCTAG GGTGAGGGCAAGAGCGCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MTDLTKTSPNRLERQLERLSEVPAFARTWFRSVILRRAVPFTGTAGLDFLQMSNNRVEIGIQNQKKVQNHIGGVHASAMN LLAETATGMVVGMNVRDDCIPLAKELKMAFKKRATGSLRAVATLTDEQRAAMQASDKGEVNVAVTVTDEAGVNPVECEFV WAWIPSGPRK
Sequences:
>Translated_170_residues MTDLTKTSPNRLERQLERLSEVPAFARTWFRSVILRRAVPFTGTAGLDFLQMSNNRVEIGIQNQKKVQNHIGGVHASAMN LLAETATGMVVGMNVRDDCIPLAKELKMAFKKRATGSLRAVATLTDEQRAAMQASDKGEVNVAVTVTDEAGVNPVECEFV WAWIPSGPRK >Mature_169_residues TDLTKTSPNRLERQLERLSEVPAFARTWFRSVILRRAVPFTGTAGLDFLQMSNNRVEIGIQNQKKVQNHIGGVHASAMNL LAETATGMVVGMNVRDDCIPLAKELKMAFKKRATGSLRAVATLTDEQRAAMQASDKGEVNVAVTVTDEAGVNPVECEFVW AWIPSGPRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18697; Mature: 18566
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDLTKTSPNRLERQLERLSEVPAFARTWFRSVILRRAVPFTGTAGLDFLQMSNNRVEIG CCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEEE IQNQKKVQNHIGGVHASAMNLLAETATGMVVGMNVRDDCIPLAKELKMAFKKRATGSLRA ECCHHHHHHHHCCHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEE VATLTDEQRAAMQASDKGEVNVAVTVTDEAGVNPVECEFVWAWIPSGPRK EEEECCHHHHHHCCCCCCCEEEEEEEECCCCCCCEEEEEEEEECCCCCCC >Mature Secondary Structure TDLTKTSPNRLERQLERLSEVPAFARTWFRSVILRRAVPFTGTAGLDFLQMSNNRVEIG CCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEEE IQNQKKVQNHIGGVHASAMNLLAETATGMVVGMNVRDDCIPLAKELKMAFKKRATGSLRA ECCHHHHHHHHCCHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEE VATLTDEQRAAMQASDKGEVNVAVTVTDEAGVNPVECEFVWAWIPSGPRK EEEECCHHHHHHCCCCCCCEEEEEEEECCCCCCCEEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA