The gene/protein map for NC_007948 is currently unavailable.
Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91789767

Identifier: 91789767

GI number: 91789767

Start: 4119185

End: 4119538

Strand: Direct

Name: 91789767

Synonym: Bpro_3926

Alternate gene names: NA

Gene position: 4119185-4119538 (Clockwise)

Preceding gene: 91789759

Following gene: 91789770

Centisome position: 79.21

GC content: 62.99

Gene sequence:

>354_bases
ATGAGCACATTTGACCATGTGGGCCTGATACAGGATATCAATGAAGGCCTCGGGCAGTTTCGCAAGGCGCAACCCGAGGC
GATGCAGGGGTTTGGGCAGCTCTCGCGAGCCGCGATGTCGGAGGGCACCCTCAGCGCCAGGCACAAGGAGCTGATGGCCC
TGGCGATTGGAGTGACCCAGCACTGCTCGGGCTGCATCGCTTTTCATGTGAAAGCCCTGCACAAACTGGGCTGCACCCGC
GCCGAGCTGGAGGAAACGCTGGCCGTGTGCGTGTACATGGGCGGTGGTCCGGCCCTGATGTACACGGCCGAGGCCCTCAA
AGCCTGGGAGGCCATGGCGCCAGATCTCACCTGA

Upstream 100 bases:

>100_bases
GTTGTACACGACATGATCCACGCATGATCCGCGTCAACACACCCGCAACGATGTCACCTGATACTTGAAAAGGTAGCAAA
ACACGGAAGGAAAGCCATCC

Downstream 100 bases:

>100_bases
AAACCTGAGCCGTCCGCTGCGCCCGCTGCTCAAGCGGCGCACCGAGCGCGGGCCGTCCACCGATCTTCAGTCCACAAAAA
AATCCGGAATGAAATCTTTC

Product: alkylhydroperoxidase AhpD

Products: NA

Alternate protein names: ORF 7 [H]

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MSTFDHVGLIQDINEGLGQFRKAQPEAMQGFGQLSRAAMSEGTLSARHKELMALAIGVTQHCSGCIAFHVKALHKLGCTR
AELEETLAVCVYMGGGPALMYTAEALKAWEAMAPDLT

Sequences:

>Translated_117_residues
MSTFDHVGLIQDINEGLGQFRKAQPEAMQGFGQLSRAAMSEGTLSARHKELMALAIGVTQHCSGCIAFHVKALHKLGCTR
AELEETLAVCVYMGGGPALMYTAEALKAWEAMAPDLT
>Mature_116_residues
STFDHVGLIQDINEGLGQFRKAQPEAMQGFGQLSRAAMSEGTLSARHKELMALAIGVTQHCSGCIAFHVKALHKLGCTRA
ELEETLAVCVYMGGGPALMYTAEALKAWEAMAPDLT

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1053 and P.denitrificans COX locus Uncharacterized protein 4 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004675
- InterPro:   IPR003779 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: NA

Molecular weight: Translated: 12539; Mature: 12407

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
9.4 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
8.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTFDHVGLIQDINEGLGQFRKAQPEAMQGFGQLSRAAMSEGTLSARHKELMALAIGVTQ
CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
HCSGCIAFHVKALHKLGCTRAELEETLAVCVYMGGGPALMYTAEALKAWEAMAPDLT
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
STFDHVGLIQDINEGLGQFRKAQPEAMQGFGQLSRAAMSEGTLSARHKELMALAIGVTQ
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
HCSGCIAFHVKALHKLGCTRAELEETLAVCVYMGGGPALMYTAEALKAWEAMAPDLT
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2061286 [H]