| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is otsA [H]
Identifier: 91789759
GI number: 91789759
Start: 4112568
End: 4113950
Strand: Direct
Name: otsA [H]
Synonym: Bpro_3918
Alternate gene names: 91789759
Gene position: 4112568-4113950 (Clockwise)
Preceding gene: 91789758
Following gene: 91789767
Centisome position: 79.08
GC content: 64.93
Gene sequence:
>1383_bases ATGAGCCGGCTGGTTGTGGTGTCCAACCGCGTGGCGGATCCGCGCAAGACGGCGGCCGGCGGCCTGGCTGTGGCGCTGGG CGATGCGCTCAATGCCACGGGCGGCATGTGGTTTGGCTGGAGCGGCACCGTCATCGAAGGCGGTGCCCCGGGCGAAGGCG AGCTGCATGTGCAGCAGGCGGGCAACGTCAAGCTGGCCACCGTGGATTTGTCCGCCGAAGACCATGCCGGCTATTACCTG GGCTACAGCAATGGCGTGCTCTGGCCGGTGTTTCACTACCGGATCGACCTGGCGCGCTTTGACGCCGGCAACATCCGCGC CTATCGCCGCGTCAACCAGCTGTTTGCGCGCAAGCTGATGACGCAGCTGCGGCCGGACGACATCATCTGGGTGCATGACT ACCACCTGATTCCGCTGGCGGCCGAGCTGCGCGCCATGGGCGCCACCCAGCGCATCGGATTTTTCCTGCACATTCCCCTG CCGCCGCAGCAGGTGCTGGCGGCCATTCCCCAACACGAATGGCTGATGCGGGCCATGTTTGCCTACGACCTGTTGGGCTT TCAGAGCGAGGCCGACCTGCAAAACTTTTCGCACTATGTGCAGGCCGAGGCCGGCGCCGAGGACCTGGGCGACAACCGGT TTCGCGCCTTCAACCGCACCGTGCGCGCCGGCGCCTTCCCGATTGGCATTGACGTGGACGAATTCGCCGCGCTCACCCAT GCCAAGGAGGGGCACGACATGTATGAACGCATGAAGGACGAATACTCGCGCCGCAAATTGCTGCTGGGCGTGGAACGCCT GGACTATTCAAAAGGCCTGCCCCAGCGCCTGCGCGCATTCAAGAGCCTGCTTGAAAAATACCCGGAAAACATCCGCAGCG CCACGCTGATCCAGATCGCCTCACCGAGCCGCGAAGACATGGGCACGTACACCGACTTGCTGCAAGAGCTCGAGAGCCTG TGCGGCGCCATCAACGGCGACTTTGGCGAGCTGGACTGGATGCCGGTGCGCTACATGCACCGCAACGTGGCGCGCAAACG CCTGCCCGGTCTCTACCGCGTGGCGCGCGTGGCGCTGGTGACGCCGCTGCGCGACGGAATGAACCTGGTGGCCAAGGAGT TCATTGCCGCGCAGGACCCGGCCGATCCGGGTGTGCTGGTGCTGTCACGCTTTGCCGGCGCCGCCGAGCAGCTGAAGGAA GCCCTGCTGGTGAACCCGTACGACACGGACGGCACGGCAGACACCATCCAGCACGCCCTGCAGATGTCGCTGCAGGAGCG GCAGGGACGGCACCAGAGGCTGCTGAAAAATATCCGGGAGCAGGATGTGCACTGGTGGCGCAAGACATTCCTGGACACGC TGCGCGACGCCGGAAGTGACTAG
Upstream 100 bases:
>100_bases TTGAGCAGGTTGGGACAGGCGACAGAGGCGAAGCGTCTGGCGAGCCGCGGCCTGCAAGGCCTCGTGCAGTACACGAAGTG ACAAGCGTGGGGGCCATGTC
Downstream 100 bases:
>100_bases CCTTTTGACGAACCTTTTGACTGGCCTCTTGACGGGCCATTTTCAGGGACACACCGCCGCTTGCAGCAGAAACCGAAGCA GAAAATTCAGGACACGATAT
Product: Alpha,alpha-trehalose-phosphate synthase
Products: NA
Alternate protein names: Osmoregulatory trehalose synthesis protein A; Trehalose-6-phosphate synthase; UDP-glucose-glucosephosphate glucosyltransferase [H]
Number of amino acids: Translated: 460; Mature: 459
Protein sequence:
>460_residues MSRLVVVSNRVADPRKTAAGGLAVALGDALNATGGMWFGWSGTVIEGGAPGEGELHVQQAGNVKLATVDLSAEDHAGYYL GYSNGVLWPVFHYRIDLARFDAGNIRAYRRVNQLFARKLMTQLRPDDIIWVHDYHLIPLAAELRAMGATQRIGFFLHIPL PPQQVLAAIPQHEWLMRAMFAYDLLGFQSEADLQNFSHYVQAEAGAEDLGDNRFRAFNRTVRAGAFPIGIDVDEFAALTH AKEGHDMYERMKDEYSRRKLLLGVERLDYSKGLPQRLRAFKSLLEKYPENIRSATLIQIASPSREDMGTYTDLLQELESL CGAINGDFGELDWMPVRYMHRNVARKRLPGLYRVARVALVTPLRDGMNLVAKEFIAAQDPADPGVLVLSRFAGAAEQLKE ALLVNPYDTDGTADTIQHALQMSLQERQGRHQRLLKNIREQDVHWWRKTFLDTLRDAGSD
Sequences:
>Translated_460_residues MSRLVVVSNRVADPRKTAAGGLAVALGDALNATGGMWFGWSGTVIEGGAPGEGELHVQQAGNVKLATVDLSAEDHAGYYL GYSNGVLWPVFHYRIDLARFDAGNIRAYRRVNQLFARKLMTQLRPDDIIWVHDYHLIPLAAELRAMGATQRIGFFLHIPL PPQQVLAAIPQHEWLMRAMFAYDLLGFQSEADLQNFSHYVQAEAGAEDLGDNRFRAFNRTVRAGAFPIGIDVDEFAALTH AKEGHDMYERMKDEYSRRKLLLGVERLDYSKGLPQRLRAFKSLLEKYPENIRSATLIQIASPSREDMGTYTDLLQELESL CGAINGDFGELDWMPVRYMHRNVARKRLPGLYRVARVALVTPLRDGMNLVAKEFIAAQDPADPGVLVLSRFAGAAEQLKE ALLVNPYDTDGTADTIQHALQMSLQERQGRHQRLLKNIREQDVHWWRKTFLDTLRDAGSD >Mature_459_residues SRLVVVSNRVADPRKTAAGGLAVALGDALNATGGMWFGWSGTVIEGGAPGEGELHVQQAGNVKLATVDLSAEDHAGYYLG YSNGVLWPVFHYRIDLARFDAGNIRAYRRVNQLFARKLMTQLRPDDIIWVHDYHLIPLAAELRAMGATQRIGFFLHIPLP PQQVLAAIPQHEWLMRAMFAYDLLGFQSEADLQNFSHYVQAEAGAEDLGDNRFRAFNRTVRAGAFPIGIDVDEFAALTHA KEGHDMYERMKDEYSRRKLLLGVERLDYSKGLPQRLRAFKSLLEKYPENIRSATLIQIASPSREDMGTYTDLLQELESLC GAINGDFGELDWMPVRYMHRNVARKRLPGLYRVARVALVTPLRDGMNLVAKEFIAAQDPADPGVLVLSRFAGAAEQLKEA LLVNPYDTDGTADTIQHALQMSLQERQGRHQRLLKNIREQDVHWWRKTFLDTLRDAGSD
Specific function: Catalyzes the transfer of glucose from UDP-glucose to glucose-6-phosphate to form alpha,alpha-1,1 trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor [H]
COG id: COG0380
COG function: function code G; Trehalose-6-phosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 20 family [H]
Homologues:
Organism=Escherichia coli, GI1788206, Length=457, Percent_Identity=46.3894967177243, Blast_Score=390, Evalue=1e-109, Organism=Caenorhabditis elegans, GI71987012, Length=441, Percent_Identity=30.8390022675737, Blast_Score=182, Evalue=5e-46, Organism=Caenorhabditis elegans, GI115533558, Length=370, Percent_Identity=31.8918918918919, Blast_Score=172, Evalue=2e-43, Organism=Caenorhabditis elegans, GI115533560, Length=370, Percent_Identity=31.8918918918919, Blast_Score=172, Evalue=3e-43, Organism=Saccharomyces cerevisiae, GI6319602, Length=470, Percent_Identity=33.6170212765957, Blast_Score=275, Evalue=9e-75, Organism=Saccharomyces cerevisiae, GI6320279, Length=400, Percent_Identity=27.5, Blast_Score=181, Evalue=3e-46, Organism=Saccharomyces cerevisiae, GI6323917, Length=389, Percent_Identity=27.5064267352185, Blast_Score=172, Evalue=9e-44, Organism=Saccharomyces cerevisiae, GI6323537, Length=382, Percent_Identity=29.0575916230367, Blast_Score=172, Evalue=1e-43, Organism=Drosophila melanogaster, GI19920676, Length=486, Percent_Identity=36.8312757201646, Blast_Score=295, Evalue=5e-80,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001830 - InterPro: IPR012766 [H]
Pfam domain/function: PF00982 Glyco_transf_20 [H]
EC number: =2.4.1.15 [H]
Molecular weight: Translated: 51712; Mature: 51580
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLVVVSNRVADPRKTAAGGLAVALGDALNATGGMWFGWSGTVIEGGAPGEGELHVQQA CCCEEEECCCCCCCHHHHCCCCEEEECCHHCCCCCEEECCCCCEEECCCCCCCCEEEEEC GNVKLATVDLSAEDHAGYYLGYSNGVLWPVFHYRIDLARFDAGNIRAYRRVNQLFARKLM CCEEEEEEEECCCCCCCEEEEECCCCEEEHHHHEEEHHCCCCCCHHHHHHHHHHHHHHHH TQLRPDDIIWVHDYHLIPLAAELRAMGATQRIGFFLHIPLPPQQVLAAIPQHEWLMRAMF HHCCCCCEEEEECCEECHHHHHHHHHCCHHHCCEEEECCCCHHHHHHHCCCHHHHHHHHH AYDLLGFQSEADLQNFSHYVQAEAGAEDLGDNRFRAFNRTVRAGAFPIGIDVDEFAALTH HHHHHCCCCHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHCCCCEECCCHHHHHHHHH AKEGHDMYERMKDEYSRRKLLLGVERLDYSKGLPQRLRAFKSLLEKYPENIRSATLIQIA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHCCEEEEEEC SPSREDMGTYTDLLQELESLCGAINGDFGELDWMPVRYMHRNVARKRLPGLYRVARVALV CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH TPLRDGMNLVAKEFIAAQDPADPGVLVLSRFAGAAEQLKEALLVNPYDTDGTADTIQHAL HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH QMSLQERQGRHQRLLKNIREQDVHWWRKTFLDTLRDAGSD HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SRLVVVSNRVADPRKTAAGGLAVALGDALNATGGMWFGWSGTVIEGGAPGEGELHVQQA CCEEEECCCCCCCHHHHCCCCEEEECCHHCCCCCEEECCCCCEEECCCCCCCCEEEEEC GNVKLATVDLSAEDHAGYYLGYSNGVLWPVFHYRIDLARFDAGNIRAYRRVNQLFARKLM CCEEEEEEEECCCCCCCEEEEECCCCEEEHHHHEEEHHCCCCCCHHHHHHHHHHHHHHHH TQLRPDDIIWVHDYHLIPLAAELRAMGATQRIGFFLHIPLPPQQVLAAIPQHEWLMRAMF HHCCCCCEEEEECCEECHHHHHHHHHCCHHHCCEEEECCCCHHHHHHHCCCHHHHHHHHH AYDLLGFQSEADLQNFSHYVQAEAGAEDLGDNRFRAFNRTVRAGAFPIGIDVDEFAALTH HHHHHCCCCHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHCCCCEECCCHHHHHHHHH AKEGHDMYERMKDEYSRRKLLLGVERLDYSKGLPQRLRAFKSLLEKYPENIRSATLIQIA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHCCEEEEEEC SPSREDMGTYTDLLQELESLCGAINGDFGELDWMPVRYMHRNVARKRLPGLYRVARVALV CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH TPLRDGMNLVAKEFIAAQDPADPGVLVLSRFAGAAEQLKEALLVNPYDTDGTADTIQHAL HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH QMSLQERQGRHQRLLKNIREQDVHWWRKTFLDTLRDAGSD HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA